Nanorana parkeri (Xizang Plateau frog): 108797737
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Entry
108797737 CDS
T04897
Symbol
PCDH17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npr04515
]
108797737 (PCDH17)
Cell adhesion molecules [BR:
npr04515
]
Cadherins
Protocadherins
108797737 (PCDH17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF4788
Glyco_hydro2_C5
Motif
Other DBs
NCBI-GeneID:
108797737
NCBI-ProteinID:
XP_018424890
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MCRFVLFHFFYWASVQALKTLNYSVSEEGGSRNAIGNINDAQLEPPERGKRPNFRVLENS
APHLLDVDSNSGLLYTKQRIDREALCKNSPKCVISLEVFANDKEICMIKVEILDINDNSP
KFASDQIDIDISENASPGTRFPLTTAQDPDFGTNGLRTYKIRGDSGLFSLDIKSRGDGTK
VPELVIQRALDREEQSHHTLILTAFDGGNPPRSANLQINIKVIDANDNSPVFESKSYTVE
IAENSPLGKRIIDLNSTDPDEGSNADILYSFSGYASEQVWDLFSIDSQTGVIQVKGNIDY
EEIQMLEIDVQAEDQGPNPIPVHCKVTVLVTDINDNYPSISFVSVRQGAISEASPPGTVI
ALVRVTDKDSGKNGQFQCWVLGNVPFKLEDNYDNFYTVVTSRPLDREIQDEYNITIIARD
NGNPSLDSTNSFSVRILDENDNPPSFSKSMYALQVSANNIPGEYLGSVLAQDPDLGQNGT
VSYSIFPSYIDGVSISTYVSINPRNGAIYALRTFYYELTKYFEFKVIAKDFGTPHLESNA
TVRVSVLDVNNNAPVIVLPSLQNDTAEIYVPRNVGVGYVISTVRAMDIDFGESGRVTYEI
IQESKEHLFEIDSVTGEIRLLNSHWENVAPVVELIIKVTDNGKPSLSTVAKLIIKANSDC
VGCINEEGNVIGEQRDWDIYLPVLIALSAISIILFAAMVTIVVKCKKENKDVGSYSGRTA
YSTQPKLGKMKKKNINKNDIMLVQSEVEEKNAMNVVSCPLLVTSPMYFDCQSRLPLSSSH
SGVMYFTPTSNETDPKENAGCQNQNNDTGPARLASENSSTSTWIPLTKTDNFPAEPNYMG
SRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSVREALKMKTTTAKC
QPLEQDPCCKTLERCNAKSVCKTVCTEQEECVNCTDECRVLGHSDRCWMPQFPTANQVEN
ADYRTNLFVPTVEAHVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLKAKRALS
PLLQEVPSASSSPTKTCIEPCASTKGPLNGCEIKSGVLAETTNQYLSSESQYISPSKQTK
DPQYIASDPMARVFADVHSRVSRDSSEMDAVLEHLEHSNRDLGRESVDAEEVVREIDKLL
QDCRGSEPVAVRK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgtgccgctttgtcctttttcactttttctattgggcttctgttcaagctttgaaaact
ttgaattattcagtttcagaagaaggggggtcaagaaatgctattggcaatattaacgat
gcacagctggagcctccagaacgggggaaaagacctaattttagggtgctggagaactct
gctcctcatttattggatgttgattcgaacagtgggttactgtacactaagcaacggatt
gatcgtgaagctctttgcaaaaacagtcctaagtgtgtaatttctctagaagtttttgca
aatgacaaggagatatgtatgatcaaggttgaaatacttgatataaatgacaactctcct
aaatttgcttccgatcagattgatatagatatttcagaaaatgcctcaccaggtaccaga
tttcctttaacgacagcacaagacccggattttgggactaatggcttgaggacttataaa
ataagaggagattctggcttgttttccttggatattaaatctagaggggatggtacaaaa
gttcctgagttagttattcagagagccttagacagagaagaacagtctcatcatacactt
attttaactgcctttgatggaggaaaccctccaagatcagccaatctgcagataaacatt
aaggttattgatgccaatgacaacagtcctgtttttgaatcaaaatcatacactgttgaa
atagctgagaattcaccattggggaagaggataattgacctaaattctacagatccagat
gagggctctaatgcagatatcttgtattcattcagtggttatgcatctgaacaagtatgg
gacctattttccattgattctcaaactggcgtgatacaggttaaaggcaatatagattat
gaagaaattcagatgcttgaaattgatgtgcaggcagaagaccaaggaccaaacccaatt
cccgtgcattgcaaagtgactgttttagttactgacataaatgacaactatccatctatc
agctttgtgtctgtccgccagggggcaattagtgaagcctctcctcctggtactgttata
gccttagttagagttactgataaggactctggaaaaaatggccaattccagtgctgggtc
ctgggcaatgtcccatttaaacttgaagataactatgacaacttctacactgttgtaacc
agtaggcctcttgatcgtgaaatacaagatgaatacaatataaccatcattgctagagat
aatggaaacccctcgctagattctacaaattctttctctgtaaggattttggatgaaaat
gacaatcctccgagtttctctaaatcaatgtatgcattgcaagtttctgcaaataatatc
cctggagagtaccttggttcagttcttgcacaagatccagatttagggcaaaatggaact
gtatcttattctatattcccctcgtacattgatggtgtgtcaatttccacatatgtttcc
attaacccaaggaatggagcaatatatgccctaaggactttctattatgagctaacaaaa
tattttgaatttaaagtaatcgcaaaggacttcggcactccacatttagaaagcaatgcc
actgtcagagtgtctgttttagatgtcaataacaatgcgccagtcattgttctacccagc
ttacagaatgataccgcagaaatttatgtgccacggaatgtgggcgtgggatatgttatc
agcactgttagagctatggacattgactttggagaaagtggccgagtgacttatgaaata
attcaggaaagtaaagaacacctctttgaaatagattcagtgactggagagatcagattg
ctcaactcgcattgggagaatgttgccccagtggttgaactaataatcaaagtcaccgat
aatggaaaaccatcactttcaactgtagcaaaattaatcataaaggcaaattcagactgt
gtagggtgcattaatgaagaaggcaacgtaatcggagaacaacgggactgggacatctac
ttgcccgttttgattgctctgagtgcaatttctattatcctttttgctgcaatggtcaca
atagttgttaagtgtaaaaaggagaacaaagatgttggatcctacagtggtaggacagcc
tattccactcaacctaaattaggaaaaatgaaaaaaaaaaacataaacaaaaatgatatt
atgcttgtccagagtgaagtggaagaaaaaaatgcaatgaatgttgtgagctgcccatta
cttgtcacatctccaatgtattttgattgtcagtccagacttcctctcagttcctctcat
tcaggcgtgatgtattttactcctacttctaatgagactgatcctaaagagaatgcaggt
tgtcaaaatcagaacaatgacacaggcccagcaagactggcctctgaaaattcttctacc
tctacctggataccattaactaagacagacaatttccctgctgagcccaattacatggga
agcagacagcaatttgttcaaagcagctcaaccttcaaagacccagaaagagcaagccta
agggacagtggtcatggagacagtgatcaagctgacagtgatcaagataccaacaaaggt
tcctgctgtgacatgtctgtaagagaggcccttaagatgaaaaccacgacggctaaatgc
caacctctggagcaagatccttgctgtaaaactctggaaaggtgtaatgcaaagtctgta
tgcaagactgtatgcacagagcaagaggagtgtgttaattgtacagatgaatgccgagtc
cttggccattctgacagatgttggatgccgcaatttcctacagcaaaccaggttgaaaat
gccgattatcgcacaaatctctttgttccaactgtggaagctcatgttgagactgaaact
tatgaaactgtgaatcccactggaaaaaagacattttgtacatttgggaaagacaaacga
gagcacaccattctcattgccaatgtaaaaccatatttaaaagccaagcgtgccctgagt
cctctgctacaagaggttccctctgcatctagcagtccaaccaagacatgcattgagcct
tgtgcctcaactaagggaccattgaatggctgtgaaataaaatcaggagtcttggcagaa
acaaccaatcaatacctgtcctctgaaagtcagtacatatcacctagtaaacagacaaag
gaccctcagtatatcgcatcagacccaatggctcgtgtatttgctgatgtgcactccaga
gtgagccgagactcaagtgaaatggacgcagtcttggaacacctggagcattcaaaccgt
gatttagggcgagagtccgtggatgctgaggaagttgtgagagaaattgataagctcttg
caagactgtcgaggcagcgaacctgtggctgttagaaagtga
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