Nanorana parkeri (Xizang Plateau frog): 108797806
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Entry
108797806 CDS
T04897
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108797806 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npr03000
]
108797806 (ARID1B)
03021 Transcription machinery [BR:
npr03021
]
108797806 (ARID1B)
03036 Chromosome and associated proteins [BR:
npr03036
]
108797806 (ARID1B)
Transcription factors [BR:
npr03000
]
Eukaryotic type
Helix-turn-helix
ARID
108797806 (ARID1B)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108797806 (ARID1B)
Chromosome and associated proteins [BR:
npr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108797806 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
108797806
NCBI-ProteinID:
XP_018424970
LinkDB
All DBs
Position
Unknown
AA seq
2413 aa
AA seq
DB search
MIMAAQVVSAAAPTTNANNKGKNQGLPGLNQDLNSGGTGPGSGSIPGLGDGTPNSGMNNN
VDHLHHHNLLHHHHHHHLLHHHHHHEVNMANANSLSSSSLLSSTTNNTNNNNSSNSDTGL
KDGRNPAVSPHFQAMEMGGGIPNHKLKCGSVGDYLAHSHHHGHHSQQHTPHHAPQHLQQQ
PPHHPNHPPQQLNQLQPQQQLAGAAQQPTPNKSSPGGGSNSSSEASDMENQQQQQQHAGV
GEEGCNNAGAGEKDVALVNQGDPQSRRTGMAGEEDDLQGKMMAGEPMSSRYEHAVLGGGQ
QQGNNSSSSNNNNNISGNGGSSSSSSSSSSSSEFNNYYGSASTNRVGPCFDQHGRQQSTG
MGMMHSGSTAPSSNIDPMQNSHEGYGSNQYDHYQGYSRAAAAAGGGAGSYGSSTSAYGVL
SSPRQASTSTPGSSNMMIGERGGSHSKPPSASNAGGFQRYQGQNQHPSGATPTLNQLLTS
PSPMMRSYGGSYPEYSTPSAPQQPSSNAHGSQQPGGMGMGKDMGSQYGATTTGWGAQQRN
HPAMSPGSTGQTISRSQQGSPMEPVVMKRPPLYGMGNSPYSQTQQSSPYPGQSYGQPGPQ
RYPMAIQGRTHSGITGMQYPQQQIPPQYGQQGYCQQGQQPYYSQQSQHHYSQPQGQYLSQ
AQQRYQAQQEVPPESYGNRTQPPSMAPGKTNHDDLNIIQQERPSSLPDLSGSIDDLPTGT
EATLSSAVSASGSTSSQGEQSNPAQSPFSPHASPHLPSIQGGGPSPSPVGSPVGSNQSRS
GPISPASIPGTQMPPQPAGSQTESSSHPALSQSPMPQERGYMPGVQRNHQLPQYGPQQTG
PSMSPHPSPGGQIHPGMGSFAQGNSSSTYGSQMNQYGTQGNYSRPPSYSGVPNTNYSGPG
PGMNINTNNQMHGQGPSGSMNMGRMPGSTVQSRPYPGNMVNMTPSSPGMTQQGAPGMGPP
IPSVNRKAQEAAAAVMQAAANSAQSRPPYIRLPAYPSQSGAGGRPMFSSQHPNYGNSQVP
MMHQPDQYGQSGFPGMNQSGLMGSNSPYSQSLNSNAAMMTPQSSPYNMMNSSAGHLGLAE
MMTGDTKLPPSLKLDGKEDGPPHPEIKSKDSYSSQGISQPPTPANLPVPSPLSPSSASIS
SFHGDESDSINSPGWPKTPSSPKANSSTTTGEKITKLYELGSEPERKMWVDRYLTFMEER
GTPVATLPAVGRKPLDLVRLYFCVKEIGGLAQVNKNKKWRELSTNLNVGTSSSAASSLKK
QYIQYLFAFECKIERGEEPPPEIFNPGESKKQPKIQPPSPANSGSFQGPHTPQSTGSNSM
AEMPGDLKPPTPASTPHGQMQPMPSGRNSSVNVQDPFSDDSGFPKRNSMTPNAAYQQGMN
VPDMLSRMPYEPNKDPFSSMRKVPGSNEPFMTPGQMANSSMPEMYNQTPSGVMSSMSMTQ
RQQFPFGPGSYDRRSEYVMGAESAMGPPGQNNMGPSNSDPSMYSPNRFQGQQRHETYGQQ
YPGQGPASGQPPYGGHQPGMYPQQQNYKRHMDSMYCPSSKRHEGDMYTMQYSSQQQDVYN
QYSNTYSGPDRRPMQGQYSFPYNRERMQSPGQIQQHGMGPQIMGGPVQSSSGDGAQQNMW
PARSDLPYQYQGRQGPAGTQQQGTYPAMNRSDDILVPDQRMNHEGQWPSHGNQRPSSYMS
PSGALQPNTRAPPSSYQTPPSMANHISRASSPASFQRSLENRMSPSKSPFLPSLKMQKVM
PTVPPTQTTGLSSQTSIIRREITFPPGSVEATPPVLKSRRKITSKDIVTPEAWRVMMSLK
SGLLAESTWALDTINILLYDDSTVTAFTLSQLPGFLELLVEYFRKCLIDVFGILKEYEVG
ANVCDALENDVDGSPSTEEEEAAMDYEGGTEEDEVIDENEPDQDDTSVLDEKENLKPEEK
NTSFIKPEKLINRHEKPKQASKFDRLPIKVVKKNDLFVIDRSDRLGHAQEFNSGLLHWQL
GGGDTTEHIQTHFESKMQIPLYRRPQRSVSPQNKKKKEQDDRFLPDNDEDQPEKSITATI
DDVLSARPGALPEDSSNACLQIESNKLSLGIHHAKSHRNITLLEDEPRSRDEVPLCTVAS
WQDSLARRCICVSNIIRSLSFVPGNDAELSKHSGLVLTLGKLILLHHEHPERKRTPQTYE
KEEEEEKGASCSKDEWWWDCLEVLRENTLVTLANISGQLDLSAYTESICLPILDGLLHWM
VCPSAEAQDPFPTVGPNSILSPQRLVLETLCKLSIQDNNVDLILTTPSFSRQEKLYATLV
RYVGDRKNPVCREMSVALLSNLAQGDFVVAKAIALQKGSLGNLISFLEDGVTMAQYQQNQ
HNLMHMQPPHLEPPSVDMMCRAAKALLAMAKVEENHSEFLLHESRLLDISITAVLNSTVS
SVICDVLFQIGQL
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggcagcgcaagtggtttcagctgctgcgccgaccaccaatgcgaacaataaa
ggtaaaaaccagggtcttcctggactgaatcaggacttaaactctggggggacaggacca
ggttcaggatctatccctggattaggagatgggactccaaacagcggaatgaacaataat
gtggatcacctccaccaccacaaccttttgcaccaccatcaccaccaccatctccttcac
catcatcaccaccatgaagtaaacatggcaaatgcaaattcattatcatcctcatctctc
ttatcctccaccactaataatacaaacaataacaatagcagcaattcagacacaggactg
aaggatgggagaaatccggcagtctcaccccatttccaggctatggagatgggtggtggg
atccccaaccacaagttaaagtgtggtagtgttggggactatcttgctcattctcatcac
catggccatcacagccagcagcatacaccccaccatgcaccccagcatctgcagcagcaa
cctccccaccaccccaaccatccaccccagcaacttaatcagctgcagccccagcagcaa
ctagcaggggcagcacaacaaccaacaccgaataaaagcagccctggaggaggaagcaat
agcagcagtgaggcgtcagatatggaaaatcagcagcagcaacaacaacatgctggtgtg
ggagaagagggctgtaataatgctggtgcaggggaaaaagatgttgctttggttaatcag
ggcgacccccagtctaggaggactggcatggcaggagaagaagacgatctgcagggaaaa
atgatggctggggagcccatgagcagtcggtatgagcatgcagtgctgggaggagggcag
cagcaaggaaacaacagcagcagcagcaataataataataatattagtggcaacggtgga
tcatcttcttcttcatcctcttcttcctcctcgtctgaatttaataattattatggcagt
gcatcaacaaacagagtagggccttgctttgatcaacatggcagacaacaaagcactggt
atggggatgatgcattctggatctacggcccccagcagcaacatagaccccatgcagaac
tcccatgaagggtatggcagcaatcagtatgaccactaccagggatacagcagggccgct
gctgctgcaggaggaggggcgggaagctatggcagctctacctctgcatatggggtgctg
agctccccaaggcaggctagcactagtaccccaggcagcagcaacatgatgataggtgaa
agaggtggcagtcatagtaagccacctagtgcttccaacgcagggggcttccaaaggtac
cagggacaaaaccagcacccatcaggtgccacccctactctgaaccaactcctaacatcc
cctagccctatgatgcggagttatggaggaagctatcctgaatacagcactcctagtgca
ccccagcaaccgtcaagcaatgcacatgggagtcaacagcccgggggcatgggaatgggc
aaagacatggggtcccagtatggagctaccaccacaggctggggagcacaacaaagaaat
catccagctatgagccctggaagcactggacaaaccatcagcagatcccagcagggaagt
ccaatggagccagtggtaatgaaaagacctccactttatggaatgggcaatagtccctac
tctcagacacagcaaagcagtccttatccaggccaatcatatggacaaccaggaccacaa
agatatccaatggcaatacagggacggacccacagtggcattacaggaatgcagtatcca
cagcaacagattccacctcagtatggtcaacaaggctactgccaacaaggccaacagcca
tattacagccagcagtcgcagcatcactattcacagccacagggtcagtacctgtcacaa
gctcaacagcggtatcaagcccagcaggaagttcctcctgaaagctacggaaacagaact
caacctccttcaatggctcctggaaagactaaccatgacgatttgaatataatacaacaa
gagaggccatcaagcttaccagacttatctggttctattgacgacttgccaactggaact
gaagcaacattaagttcggctgtgagtgcctcgggttctacaagcagccagggggagcaa
agcaatcctgcacagtcacccttttctcctcatgcatcaccacatctacccagcatccag
ggtggtggtccatcaccatcacctgtgggctcaccagttgggagcaaccagtcaagatca
ggtccaatatcacctgctagtattcctggaacccagatgccaccacaaccggcaggcagt
caaactgaatccagctcacatcctgcgttaagccagtcaccaatgccacaggaaagaggt
tatatgcccggtgtacagagaaaccaccagttgccacaatatggaccccagcaaactggg
ccttctatgtctccacatccatctcctggaggtcagatacatcctggtatgggcagcttt
gcacaaggaaactccagcagcacttatggctctcagatgaaccaatatggaacgcaaggt
aattactcaaggccaccatcatattctggagtaccgaatacaaattacagtggaccaggc
cctggaatgaatataaacaccaacaaccagatgcatgggcaggggcccagtggctctatg
aacatgggcagaatgcctggcagcacggtgcaaagcaggccatatcctggaaacatggtg
aatatgacccccagttcccctggcatgacacagcagggtgctccagggatgggaccaccc
ataccttctgtaaaccgcaaagcacaggaggcagcagctgccgtgatgcaagcagccgct
aactctgctcaaagcaggccaccatacattaggttgcctgcttatcccagccagtctggg
gctggtggacgccccatgttttcctcacagcatcccaactatggcaactctcaggttcca
atgatgcatcagcctgatcagtacggacaaagcgggtttcctgggatgaaccagagtggc
cttatgggatccaattctccgtacagccaatccttgaatagcaatgctgccatgatgact
ccacaatcatccccctacaatatgatgaacagttcagcaggtcacttgggtcttgctgaa
atgatgactggagatactaaactgcctccttccctgaaactcgatggtaaagaagatggg
cctccccaccctgaaataaagtcaaaggatagctacagttcacagggtatatctcagccc
ccaaccccagccaacctgccagtcccttccccattgtccccaagctccgctagcatctcc
tcctttcatggagatgaaagtgatagcattaacagcccaggctggccaaagactccatca
agccctaaagccaattcatctactaccactggagaaaagataactaagttgtatgagttg
gggagcgaacctgaacgcaagatgtgggtggacagatacctgacttttatggaggagaga
ggaacacctgttgcaacattgccagctgttggtaggaagcccctagacttggtcaggctt
tacttctgtgtcaaggagattggtggtctggctcaggttaataagaataagaaatggcga
gagctttcgacaaatctaaatgttggcacttctagcagcgcggcaagctcactgaaaaag
cagtatatccagtacctgtttgcttttgaatgcaagatagagagaggggaggagcctcct
ccagagatcttcaatcctggagagtcgaagaaacagcctaagattcagccgccatctcct
gcaaactctggatctttccaaggaccacatactccccaatccactggcagtaattccatg
gccgagatgcctggggatttaaagcctccaactcccgcatcaacaccacatggacagatg
caaccaatgccaagtggcaggaacagttcagtgaacgtacaggaccctttctcagacgat
tcaggttttccaaagcgcaattcaatgactccaaacgctgcttaccaacaaggaatgaat
gtgccagacatgttgagccggatgccatatgagcccaacaaagatccattcagcagcatg
agaaaagtgcctgggagcaatgagcctttcatgacccctggccaaatggcaaacagcagc
atgccagagatgtacaaccagactccctctggggtgatgtccagtatgagtatgactcag
cgtcagcaatttccctttggacctggaagctatgatagaaggtcagaatatgtcatgggt
gctgaaagcgcaatgggaccacctggtcaaaacaacatggggccttcaaacagtgatcca
agcatgtattcaccaaaccgttttcaaggacaacaaaggcatgaaacctatggacagcag
tatccagggcaaggtcccgcttcaggacaaccaccttatggagggcaccagccaggaatg
tacccacaacaacaaaactacaaacgtcatatggatagcatgtattgtccttcatcgaag
cgccatgagggagacatgtacactatgcagtacagcagccaacagcaagatgtgtacaat
caatatagcaacacttactctggacctgacaggaggccaatgcaaggacagtattctttc
ccttacaacagagagaggatgcagagtccagggcaaatacagcaacatggcatgggacct
caaataatgggtggcccagtgcagtcatcttcaggtgatggtgctcagcagaatatgtgg
cctgcacgcagtgacttaccctatcaataccaaggaaggcaaggcccagctggcacacaa
cagcaaggaacttatccagctatgaaccgttctgatgatatcttggtacctgaccaaaga
atgaatcatgagggtcagtggccatctcatggaaaccaacgtccgtcttcctacatgtcc
ccatctggagcattgcaaccaaacactagagcgccaccatcatcttaccagaccccacca
tctatggcaaaccacatttcaagggcctcaagccctgcctcatttcagcgctcactggaa
aaccgtatgtcaccaagcaaatctcctttcttgccttcactaaaaatgcagaaggttatg
cccacagttccaccaactcagacaactgggctttcttcacagacttctatcatcaggcgt
gaaattacctttccacctggctcagtggaagcaactccaccggtcttgaagtcaaggaga
aaaattacctcaaaagacattgtaacacctgaagcttggagggtaatgatgtctttaaaa
tctggtctcttggctgaaagtacatgggctttagacaccatcaacatcctattgtatgat
gacagtacagtgactgcttttaccctatctcagctgcctggctttttggagctcttggtg
gaatattttaggaaatgcctcattgatgtctttgggatattgaaggagtatgaagttggg
gcaaatgtttgtgatgctcttgaaaatgacgtagatggtagtccatctacagaggaagaa
gaagctgctatggattatgaaggtggtacagaagaggatgaagttatagatgaaaatgaa
cctgatcaggatgataccagtgtattagatgagaaagaaaacctaaaaccggaggaaaaa
aacacctcattcataaaacctgaaaagttaataaatcgacatgagaagccaaaacaagca
agtaaatttgataggctgccaatcaaagttgtaaagaagaatgatctatttgttattgac
cgttctgaccgacttggacatgctcaggaattcaatagtgggctacttcattggcagctt
ggtggaggtgatacaactgaacatattcagactcactttgaaagtaaaatgcaaattccc
ttgtacaggagacctcaaagatcagtcagtcctcaaaacaaaaagaagaaagagcaagat
gatagatttctaccagataatgatgaggatcaaccagaaaagagtataactgcaaccatt
gatgatgtactctctgcaaggcctggtgcactcccagaagattccagtaatgcttgcttg
caaatagagagcaacaaactttcgttaggaatccaccacgccaaaagtcacaggaatata
acattactggaagatgaaccgagaagccgagatgaagttcctttgtgtacagtagcttct
tggcaagactctttggccaggcgttgcatttgtgtgtcaaatattatccgtagtttgtct
tttgtgcctgggaatgatgccgagttgtcaaaacattcaggcttggtcttgacccttggg
aaattaattctcctccatcatgagcatccagaaagaaaacgaacaccacagacttatgaa
aaagaggaggaggaagaaaaaggtgccagctgcagcaaggatgagtggtggtgggactgt
ctcgaggtactgagagaaaatactttggtcacattagctaatatttctggacaattagac
ttgtctgcatacacagaaagtatctgtttgccaatcttggatggtttactacactggatg
gtgtgcccatctgctgaggcacaggatcctttcccaacagtagggcccaattctattctt
tcccctcagagacttgtgcttgaaacattatgtaaactcagtatacaggacaataatgtg
gatcttattttaaccacgccttctttcagtcgccaagaaaaactctatgcgacgctagtt
aggtatgtcggggatcgcaaaaaccctgtgtgtcgagaaatgtctgtggcgctgctttcg
aaccttgctcagggggattttgtggtagcaaaggctatagctttgcaaaaaggaagcctt
gggaacttaataagcttcttggaagatggtgttaccatggctcaatatcagcagaatcaa
cataacctcatgcacatgcagcctccccatttggagcctcccagtgtagacatgatgtgc
agggcagctaaggctttattagccatggccaaagtggaagagaaccactccgagttcctt
ttgcacgaaagccgtttattggatatctctataacagcggttctgaactctaccgtttcc
tcagtcatttgtgatgtactctttcaaataggacagttatga
DBGET
integrated database retrieval system
