Nanorana parkeri (Xizang Plateau frog): 108797889
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Entry
108797889 CDS
T04897
Symbol
MMP2
Name
(RefSeq) 72 kDa type IV collagenase isoform X1
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108797889 (MMP2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
npr01002
]
108797889 (MMP2)
Enzymes [BR:
npr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
108797889 (MMP2)
Peptidases and inhibitors [BR:
npr01002
]
Metallo peptidases
Family M10
108797889 (MMP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_5
Reprolysin_4
Reprolysin_3
DUF4953
Motif
Other DBs
NCBI-GeneID:
108797889
NCBI-ProteinID:
XP_018425086
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MKFVQAIHLCAFLFTFFDRFEQNTAAPSPIIKFPGDTSPKTDKEMVTQYLLKYYGCPKDG
CIMVLKDTLKKMQKFFHITETGEIDQKTIETMKKPRCGNPDVSNYQFFPRKPKWEKNHIT
YRILGYTTDLDSETVDDAFARAFQVWSDVTPLKFTRLMDGEADIMINFGRWEHGDGYPFD
GKDGLLAHAFAPGSGIGGDSHFDDDELWTLGEGQVVKVKYGNADGEFCNFPFKFNGKEYN
SCTDVGRSDGFIWCSTTFDFDKDQKYGFCPHELLFTIGGNADGKPCKFPFKFQGSTYDSC
TTEGRSDGYRWCATTEDYDKDTNYGFCPETTLSTVGGNSDGSPCVFPFTFLGNNYNSCTS
TGRSDGKLWCATSSNYDNDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSDDPGALMAPIY
TYTKKFRLSQDDISGIQELYGRGEGKEPRPGPDPYPTEGPVTPELCTSDIVFDGISQIRG
ELFFFKDRFIWRSVNRREKPSGPLLVATFWPELPDKIDAVYEDPEEEKTVFFAGDEYWIY
SSSAVERGYPKKLTNLGLPSDLKRVDGAFNWGRNKKTYIFAGDKFWRYNEAKKKMDPGFP
KLIADAWNGVHDNLDAVADVRGSGYSYFFKDQYYHEMEDRILKIVKVGNIKSDWLGC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtacaagcaattcatctctgtgcgtttttgttcacgttttttgatcggttt
gaacagaacacagctgcaccttcacccatcattaagtttccaggagacacgtcgccaaaa
acagacaaagagatggttacccaatacctgttaaagtactatggttgccctaaagatggt
tgtattatggtactgaaagacacattgaagaaaatgcagaaatttttccatattactgag
acaggagagatagatcaaaagactattgagacgatgaaaaagccaagatgcggtaaccca
gatgtgtccaactaccagtttttcccaaggaaacccaaatgggaaaagaaccatatcaca
tacaggattcttgggtacactactgatctcgattctgaaactgtggatgatgcatttgct
cgggcatttcaagtctggagtgatgtaacacctctaaagttcactcgattaatggatgga
gaggctgatattatgattaactttggccgctgggagcatggagatggatatccatttgat
ggcaaagatgggcttttggctcatgcttttgcaccaggatcaggaattggtggagactcc
cactttgatgatgatgagctttggaccttaggagaaggtcaagttgtgaaggtcaaatat
ggaaatgcagatggagaattttgcaattttcctttcaaattcaatggtaaagaatacaac
agttgcacggatgttggccgcagtgatggatttatctggtgttccactacatttgacttt
gataaagatcaaaaatatggattctgccctcacgaattgctcttcacaataggtggaaat
gcagatggaaaaccttgcaagttcccgtttaagtttcaagggagcacttatgacagctgt
acaaccgagggaagaagtgatggttataggtggtgtgcaactacagaagactatgacaag
gatacaaattatggattctgcccagaaacaacactctccacagtgggcggaaattcagat
ggctctccttgtgttttcccttttacttttcttggcaataattataactcatgcaccagc
actggaagaagtgatggcaaactatggtgtgcaacatccagcaactacgataatgaccgc
aaatggggtttctgcccagatcaaggttacagtctgtttcttgtggctgctcatgagttt
ggacatgctcttggactggaacattctgatgacccaggtgctttgatggccccaatttat
acctacactaagaaattccgtctctcacaagatgatataagtggaatccaagaactttat
ggaaggggagaaggaaaagaacccaggccaggacctgatccctatcccacagaaggtcct
gtaaccccagagctgtgcaccagtgatattgtgtttgatggcatttcacaaatcagagga
gaattattcttctttaaagaccggttcatatggcggtctgtgaaccgcagagagaagcca
tcgggtcctctccttgttgctacattctggcctgagctacctgataaaatagatgctgtg
tatgaagaccctgaagaggagaagactgttttctttgcaggtgatgaatattggatttac
tcctcaagcgctgtagaaagaggatacccaaagaagttgacaaaccttggattgccgtca
gatcttaaacgtgtggatggtgcatttaactggggcagaaacaagaaaacatacattttt
gccggtgacaagttttggagatataatgaagcaaaaaagaaaatggaccctggctttcca
aaactaattgcagatgcatggaatggcgtacatgataatttagatgctgtggcagatgtc
cgaggaagtggctacagttatttctttaaagatcaatactatcatgaaatggaagataga
atactaaagattgttaaagttggcaatattaaaagtgattggctgggttgctga
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