Nanorana parkeri (Xizang Plateau frog): 108801821
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Entry
108801821 CDS
T04897
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04510
Focal adhesion
npr04512
ECM-receptor interaction
npr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108801821 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108801821 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108801821 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npr04147
]
108801821 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
npr00536
]
108801821 (COL6A2)
Exosome [BR:
npr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108801821 (COL6A2)
Glycosaminoglycan binding proteins [BR:
npr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108801821 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
108801821 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
108801821
NCBI-ProteinID:
XP_018429238
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MAKLHVLCLLLAITCGSLLAQNGDQKSCADKTKCPVNVFFIIDTSESIILQTAPIQSLLD
HMKRFIPAFLSKLENAAYRDQILLNWQYAGLHYSDEVQIYSQLTADQKEYITKLRGVQYI
GRGTFTDCAIANMTSLLDAAIKAQADQGQQVVNFAVVITDGHVTGNPCGGMKAQVELAQS
KGIKLFSVAASQSVYESGLREIASQPYELFRNAYTVTNPNDQTEIDQRTIDKIIQVMKHE
AYGECYKLSCLEIKGPPGVHGQRGQKGAKGNAGEPGTIGPKGRQGDPGIEGPIGYPGPKG
VPGLKGEKGDFGADGRKGSAGLAGRNGTDGQKGKPGRIGAPGCKGDPGDKGPSGYAGNAG
DRGEDGDPGPKGDAGRPGRGGPPGAFGEKGDKGPSGNTGAPGASGLKGNKGGPGTGGPKG
EPGRRGDPGNKGSAGTDGSNGEKGDPGPEGPRGLGGEAGIKGGKGDRGAPGPRGAQGPVG
VAGRNGSRGDPGDMGERGNPGGPGLKGDRGRPGISYPGPRGSPGDKGDNGPPGPLGGRGD
FGQKGTPGPKGVKGEGADKGSTGEPGPRGPPGESGGEGGSGPPGDPSLTECDVMTYVRET
CGCCDCEKRCGALDIVFIIDSSESIGYSNFTLEKNFVINVVSRLGSFAKDPGSDIGTRVG
VVQYSHEGTFEAIQLNDPRIDSLSSFKEAVRRLEWIAGGTWTPSALQFAYNTLIRETRRN
KAEVFAVVITDGRHDPRDPDEGLTSLCGVDITVNAIGIGDMFNKEDDPETLTSIACNNKS
QVQKMKLFSELVADEFIENMEKRLCPDPQIVCPDLPCQSELAVAQCTQRPVDLVFLLDSS
ERIGAQNFKQAASFVEEVSRQLSLAKKDDDTANARVALLQYGGEKEQAVAFSLTYNLTEI
SQGLSRLTYFDSSSNIGSAIIYAINNILQDKTRRARRFAETSFVLITDGVTGEVDLKEAV
TAMKKNNVVSTLVSVGTDLDMQVLRELSLGESAAIFKEKEYARLAENAFLDRFVRWVC
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggccaagctccatgtgctgtgtttgctgcttgccatcacatgtggatctctcttggca
cagaatggtgatcaaaaatcttgtgcagataaaaccaaatgtccagtcaatgtcttcttc
atcattgacacatccgagagtataattctacagacggctccaattcagagcttgctggat
catatgaagcgttttattccagccttcttgtcaaagctagaaaatgctgcctaccgggac
cagatccttctgaactggcagtatgcaggcctgcattattcagatgaagtccaaatctac
agccaacttactgccgaccagaaggaatacattacaaaactacgtggagtccaatacatt
ggacggggtaccttcaccgactgcgccattgctaatatgacatcactacttgatgcagca
ataaaggctcaggctgaccaaggtcaacaagtcgtgaattttgcagtagtgatcacagat
ggtcatgtgactggtaacccatgtggaggaatgaaggcacaggttgaattagcccagtct
aaagggatcaagctgttctcagtagctgcaagtcaatctgtgtatgagtctggtctcagg
gagattgcaagccaaccttatgagctgttcaggaacgcatatacagtgaccaatcctaat
gaccaaactgagatcgatcagagaaccattgataaaatcattcaagttatgaaacacgaa
gcttatggagagtgttataaactgagctgcctagagattaaaggaccccctggtgtacat
ggacagagaggacagaagggtgccaaaggaaatgctggtgaacctggaaccattggaccg
aaaggtcggcagggagaccctggaattgaaggaccaattggatatcctggacctaagggt
gttccaggtttgaaaggtgaaaagggagattttggagcagatggaagaaagggatctgct
gggctggctggaagaaatggtacagatggacagaagggtaaacctggtcgaattggtgct
cctggctgtaagggagatcctggcgataagggcccttctggttatgcaggaaatgctgga
gacagaggagaagatggagaccctggaccaaagggtgatgctggaaggcctggacgtggt
ggaccaccaggggcattcggagagaagggagataagggtccctctggaaatactggggct
cctggagcttcaggtttaaaaggaaataaaggaggccccgggacaggaggaccaaaagga
gagccaggtcgcagaggagatcctggcaacaaaggaagtgcaggtactgatggatccaac
ggagagaagggagatcctggtccagagggtccacgcggacttggcggagaagctggcata
aaaggaggaaagggtgatcgtggagctccaggaccaagaggagcacagggacctgttgga
gttgctggcagaaatggttcacgtggagacccaggggacatgggtgagagaggaaaccca
ggaggaccaggacttaagggagacagaggaagacctggtatcagctacccaggaccacgg
ggatctccaggtgataaaggagacaacggaccaccaggacctctgggaggacgtggagac
tttggacaaaagggaacacctggacctaaaggagtgaagggagagggtgctgacaaagga
tccacaggggagcctggcccccgagggccacctggtgaatccgggggtgagggtggcagt
ggacctccaggtgacccttctttgactgaatgtgatgtcatgacatacgtgcgagagaca
tgtggatgctgtgactgtgaaaagcgctgtggtgctctggacattgtcttcattattgac
agctctgaaagtattggctacagcaattttactctggagaagaactttgtcatcaatgtt
gtaagcaggctaggatccttcgccaaagatccaggctctgacataggtactcgagttgga
gttgtccagtacagtcacgagggtacgtttgaagctattcagttaaatgatccccgcatt
gactctctgtccagcttcaaggaggcagtaaggcgtctggaatggattgctggaggaaca
tggaccccatcagctctgcagtttgcctataatacgctaatcagggagacgagacgcaac
aaggccgaagtttttgctgtagtaatcactgacggtcgccacgacccaagagaccctgat
gagggtctgacttcactgtgtggtgtcgatatcacggtaaatgcaattggcattggtgac
atgttcaacaaagaagatgatcctgagaccctgacttccatcgcctgcaacaacaaaagt
caagtccagaagatgaaacttttctctgaacttgttgctgatgaattcatagaaaatatg
gagaagcgactgtgtccagaccctcagattgtgtgcccagacctgccctgtcaatcagag
cttgccgttgcccagtgcacacagcgcccagtggatctcgtctttcttctggatagctct
gagagaattggagcacaaaacttcaaacaagcagcatcctttgtagaagaggtctctaga
caactgtcactggccaagaaggatgacgacacagccaacgcccgtgtggccctgctgcag
tatgggggagaaaaggagcaggctgtggcattcagtcttacctacaacctgactgagatt
tcccaagggctttcacgtctcacttactttgactcatcctcgaacatcggaagtgccatc
atttatgccatcaacaacatccttcaagacaagaccagaagagcaaggcgatttgcagag
acctcttttgtcttaatcactgatggtgttactggtgaggtggacctgaaggaggctgtc
acagcaatgaagaagaataatgtggtctccaccctggtttctgttggaacagaccttgac
atgcaggttctaagggagcttagtttaggcgagagtgcagccatctttaaagagaaggaa
tatgccaggctggctgaaaatgcctttttggacagatttgtgcgttgggtgtgctaa
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