Neodiprion pinetum (white pine sawfly): 124211519
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Entry
124211519 CDS
T08966
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
npt
Neodiprion pinetum (white pine sawfly)
Brite
KEGG Orthology (KO) [BR:
npt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npt04121
]
124211519
Enzymes [BR:
npt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124211519
Ubiquitin system [BR:
npt04121
]
Ubiquitin ligases (E3)
U-box type E3
124211519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC_2
zf-CCHC
zf-RING_5
zf-C3HC4
U-box
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
124211519
NCBI-ProteinID:
XP_046466610
EnsemblRapid:
LOC124211519
LinkDB
All DBs
Position
2:complement(7588183..7602558)
Genome browser
AA seq
1955 aa
AA seq
DB search
MSVHYKFKSTLDYDTVSFDGLHISVADLKKAIFHQKRIGKNTDFDLQITNAQTKEDYTDD
NALIAKNTSLIIARVPLTIQQKRSWDRNEGPAVGNSKDESNLGRSVDLTRLDGSEEDKIR
AMMTQSTQDYDPSNYMKIRGANQTGDVPPNYRCYKCHQPGHWIKNCPLGSNQEPIEIKKS
TGIPRSFMVPVEGPLVPGAMMTPTGQYAVPAIDHQAYKEGKKERPPFSQEPEPVVEKLEI
PEDLVCTICKDLLTDAVMIPCCGNSFCDECIRTFLLESEEHECPDCNEKDVSPETLIPNR
FLRNAVSNFKNETGYAKRQSYRSAMQRAQAVILADQSKTENQQAATLTPPQVLPLQAQEV
SQPMAVEPVPQQPQLDAIPQEFDLHRPPPVMSILPESTSESDLQSDSVTKLTTDEETEVP
PPPGTEPLLPIPAIGSSPEREKERREPSVIDRDDHREDYRGERHSREQKRSFSRDSHSDR
SNERGRRIENLRTVTEQRIVNRRRSLSPRRSHRGDYPPQSGPPPHVPNHSLPSKSYQRPP
PGESHYPPPMQYDPGIRRSTEDRPGTPTVDEPHLHPPPTNTQPPLLPFPPGEDRVPAPNY
NQPPPNMAPHNPPLLPDPYMGHRMPMYQHQQEPHYGPPRYERPPYQAPGFRPQQPPRGFT
GPTRPLRGMHHVGYRGTQPPPPGMGRNIHNGNQPGVIDDPLEAFERMLREKDERDRRLGK
HRRRSRSRSRTRSYSRSRSRSFGRRSPLLSRISRSRSPPPKRRSSRSPLPLRARSRTPKR
RSRSRSFTISRSRSYSRSVSPRGSLPRDRDRDRDRDRDRDRERERERERERERERERERE
RERERDRERDRDRDPPPRYRSPIRSPPRFQRDRDRDPRPRSREPRDSYNNYYNDSPANDY
QFRDRDREPLPRERPPPRYPARNPPPQHNIPPLLPHLGPGSHPPPLMSLGPSPLDRKDYY
DSYNRYAGPPPQRFASPNREPPPKRFDDVAPPGTEGYYDLPPPGVDHLERPVKEDRDRLR
ISREREERERDHASKDLDLEDRDRLPIRDDRIRERDDRIRDREDRDRRGLEREREEREKI
VPPPPRDREERGIREKDERDRRERERERDREERHPQRDRREEERVVEKRDYDKDRYREDR
DRYRGDDKNRGRDRDKRDRDYDPDRERHERYERHSVDRKRTRKSQSPIRPKSRNEAKDQT
PEKVKRKEKDHDDKVDEKKKEKKIKDKKKKKDTDDKEKKKKKKKEREKDKEKKAALKEAA
KDETLLKVNETEVPRIEEPIHVAEEIKPEPLEVEKIVPEKICEEAPIPIVTEEFEKKSLA
INPEPPELKESTPECSEEPEFGANPPNPNFKPIPELKAETEPVDSLYGGLDDTEIKTLIT
EDYSLALEQQSKEEQEERVENVEKSPKKDEFLAPVPELSKWERDETAEKSDSVPESPQEK
VNTDEPKSTKVVTSEVLKRAENAIFQKAINAIRPIEIKKISESRKILYQNPEPKILDPEP
PRKSVNVTINVGRNERNVEIAEPLKKAKLDRSKFKPVPESHSPTRLSAKERLGDKIEDDK
ERKVIPVKGFLDRHESKTESTSRSRSPRSGRERRISPLMERRIEPPLTVSNPERKVFLDE
RKRDRDRTDRPRDRNESRSERHESRSDRNESRGDRESRTDRGDIRMNRNETRSEARNESR
NERNERERERDRKTRTPPIAYKRDDPMKMSFAKRKEDEEDKKKDKKVKEDRKRKKEHRSR
SKSKDRKKRKEKKHKKDKEKSLEKKSKHKDESIIKEKSQAIAVKPVFENSTLLPTEVKKQ
RKNPRLVSDRKRSVLDEASFEPDYSATDSESDGEETKSTHVTVKKIKPDVTEPQKESEIK
LVKKRVRSTSTEDDTSTTETSSSDSDSSDDSPKRKKRKRKKHKKRKSAKKESTTESDTNS
DSSDSSSEEDKHRKKSKKSKSKNKPSKKKKKSKHK
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacactacaagttcaagtctactttagactatgacaccgtatcatttgacggc
ctgcacatctctgtggcagacttgaaaaaggcaatctttcatcagaagcgtattggcaaa
aatacagattttgacctgcagataaccaatgcccaaactaaagaagattataccgatgat
aatgctttgatagcaaagaacacaagcttaatcatagctagggtcccattgaccatccaa
caaaaacgttcttgggatcggaacgaaggaccagccgttggcaattcgaaggatgaatca
aatttgggcaggtcagtagacctaacgcggctcgatggctcggaagaagataagattcgt
gcaatgatgactcaatcgactcaagattacgatccgtcgaattacatgaaaattcgaggg
gctaatcaaaccggtgatgttcctccgaattaccgctgctacaagtgtcaccagcctggt
cattggattaaaaactgtccgttgggctctaatcaagaaccaattgagattaaaaagagt
actgggattcccagaagctttatggttcctgtagagggtccgttggtaccaggtgctatg
atgacaccaacgggacagtacgccgttccagctattgaccaccaagcctataaagaagga
aagaaagaacggccgcctttttcccaagaaccagaacctgtcgtagaaaaattagaaatt
ccagaagacctggtatgcacaatatgcaaagatttgttaacagacgcggtgatgatacca
tgttgcgggaattctttctgcgacgaatgtattcgaacttttctgcttgaatcagaggag
catgagtgtcccgattgcaacgagaaggatgtatctcctgaaacactgataccgaacaga
tttctcagaaatgcagtctcaaatttcaaaaatgaaaccggttatgccaaaagacagtcg
tatcgatcagctatgcaaagagcacaagctgttatactggcggatcaatctaaaactgag
aaccaacaggccgccactttaacacctcctcaagttctgccattacaggcgcaggaagtt
agccaaccgatggcagttgaacctgttcctcaacagcctcaattagatgcgattcctcaa
gaatttgaccttcatcgtccgccaccagtgatgtccattcttcccgagtctacctcagaa
tcagacttgcagagtgattctgtaacaaaattgacaacggacgaagagacggaagtaccg
ccgcctccaggcactgaacctctcctaccaatacctgcgataggaagttcaccagagagg
gagaaggaacgaagggaaccgtcggttatcgacagagacgatcaccgcgaggattacaga
ggagaaaggcattccagagagcaaaaaagaagcttcagcagggacagtcatagcgacagg
agtaacgaaagaggtcgcaggatagaaaatctacgaacagtcaccgaacagagaatagtg
aaccggaggagatccttatctcctagacgctcacatcgcggtgactatccccctcagtcc
ggacctcctccacacgtcccaaatcattctttaccatccaaatcataccagagaccacct
cctggtgaaagccattatccaccgccaatgcagtatgatccaggcattcgacgatccact
gaagaccgacctggcactccaacggtcgacgaacctcacctacatcccccaccaaccaac
acacaacctccgcttctgccgtttccaccaggtgaagatcgcgttcctgctccaaactat
aatcaaccgccgccgaacatggctcctcataatccaccactgttgccagatccttacatg
ggtcacagaatgccgatgtatcagcatcaacaggaaccgcattatgggccaccaagatat
gaaagacctccttatcaggcccctggtttcaggcctcagcagccaccaaggggtttcaca
ggaccaacaagacctctgcgtggaatgcatcatgttggatatagaggaacccagccaccg
ccaccaggaatgggaagaaacattcacaatggaaatcaacctggtgtgattgatgatccg
cttgaagctttcgaaagaatgcttcgtgaaaaagatgagagagacagaagattgggtaag
cacagaaggcgatcgagaagtcgttctagaactcgttcgtattcgcgatcgaggtccaga
tcttttggcagacgatcacccttgctgtctagaattagcagatctcgaagtcctccgcct
aaaagacgttcgtccagatctcctttaccgttaagagcgagaagccgtactccaaaacga
cgatccagaagccgaagcttcaccatcagcagatccagatcgtattcgcgaagcgtatct
ccgcgtggttcgttaccgcgagatagagacagagacagagatcgagatagagatcgagat
cgggaaagagagagggagagggagagagaacgggaaagggagagagaaagggaaagagaa
agggagcgggagagagacagagaaagggatcgtgatcgtgatccgccaccgagatataga
tccccaattagatcgccaccgagatttcaaagagaccgagacagagatccacgtcctaga
tctcgggaaccacgcgatagttataacaactactacaatgattcgcctgcgaatgattat
cagttccgggacagggaccgagagccactgccaagggaaagacctccacccagatatcca
gccaggaacccaccccctcaacataatatacccccactgctgccgcatcttggacccgga
agtcatccacccccgctcatgtcgctgggcccttcgccactggacaggaaagactattat
gattcctacaacaggtacgcaggccctccaccgcaacgctttgctagtcctaatcgtgaa
ccgccaccaaagagattcgacgatgtcgcaccgccaggaaccgagggttattatgacctg
ccaccacccggtgttgaccacctcgagagaccagtgaaagaagatcgtgatagattgcgc
atatcacgggagcgcgaagaacgtgagcgtgaccatgcgtccaaagatctagacttggag
gacagggacagattgccgattagagatgacagaattcgagagcgtgacgatcgtataaga
gatagagaggacagagatagaagagggttagaaagggaaagagaagagagagaaaagatt
gtcccgccacctccgagagatcgagaggagagaggaataagagagaaggatgaacgagac
agaagagaaagagaacgggagagggaccgtgaggagagacacccacaaagagatcgcagg
gaggaagaaagagtagttgagaaacgagattacgataaagaccgatatcgagaagataga
gatcgttacagaggagatgataaaaatcgaggacgagatagagacaaacgtgatcgtgat
tacgatccagatcgtgaacgtcacgaacgttacgagaggcattcggttgacagaaaacga
acacgcaagagccagagtccaattagaccaaagtcgaggaacgaggctaaggatcaaacg
ccagaaaaggtaaagaggaaagaaaaagaccacgatgataaagtggatgagaagaagaaa
gaaaagaagataaaggataagaagaagaaaaaggacactgatgataaagagaagaagaag
aagaagaaaaaagagagagagaaagataaagagaaaaaagcagcattgaaagaagcggct
aaagatgaaactctgttgaaagtcaacgaaactgaggtcccgcgtatcgaagaaccaatc
catgtggcggaagagattaaacctgagccattagaagtggaaaaaattgtgccagaaaag
atttgcgaagaagctcctatacctatagtgaccgaagaatttgaaaagaaatctttggcc
ataaatcctgagccaccagaattgaaggaaagtacacccgaatgctcagaggagccagaa
ttcggcgcgaatcctccaaatccaaatttcaaacccattcccgaattgaaagctgaaact
gaaccagtggattcgttgtatggcggactggacgatacagaaataaaaacattgattaca
gaagattattctctagcgcttgagcaacagagtaaagaagaacaggaggaacgagttgaa
aatgtcgagaaatcgcctaaaaaagacgaattccttgcacctgttcctgagttatctaaa
tgggaaagagatgagacagctgaaaaatcagacagcgtccctgaatcgccacaagaaaag
gtaaataccgatgaacccaaatcgaccaaggttgtaacatcagaggtactgaagcgtgct
gagaatgcaatattccaaaaagctatcaatgctattagacctatagagataaagaaaata
agcgaaagtcgtaaaatattgtatcagaatcctgagccaaagattttggaccctgagcca
ccacgaaaaagtgtaaacgttactataaatgttggaaggaatgaaagaaatgttgaaatc
gctgagccgttgaaaaaagcaaagttggatcgctccaagttcaaacccgttcctgaatct
cattcgccaacaaggttatcggcgaaggagagactcggcgataaaattgaagatgataaa
gaaagaaaagtcattcctgtcaaaggattcctagatcgacacgaatctaagaccgaaagt
acatccagaagcagatcacctagatcaggcagagaaaggaggatttctccattgatggaa
aggcgcatcgagccaccactgaccgtctcaaacccagagcgtaaagtctttttggatgag
agaaagagggatagagatagaaccgaccgtccaagggatagaaatgaatctagaagtgaa
cgtcacgaatcgaggtcagatagaaatgaatcgagaggggatcgagaatctagaacagac
cgcggggacattagaatgaacagaaatgagactagaagtgaggctagaaacgaatctaga
aatgagagaaatgaacgcgagagagagcgagataggaaaactcgcacccctccgatagct
tacaaacgagatgatccaatgaagatgagttttgcaaagcgcaaagaggacgaagaagat
aaaaagaaggataagaaagtcaaggaagacagaaaacgtaaaaaagaacatagaagtaga
agcaaatccaaggatcgcaagaaacgcaaggaaaagaaacacaaaaaagataaagaaaag
tctttggagaagaaatcgaagcacaaagatgagtcaatcattaaagaaaagtcacaagca
attgcagtaaaaccggtgttcgaaaattcaactttattgcccacggaagtaaagaagcag
agaaaaaatccaagactcgtctcagatcggaagcgcagtgttttagatgaggccagtttt
gaacctgactattcggctacagattctgaatctgatggtgaggagaccaagtcaactcat
gttaccgtgaaaaaaattaaaccagacgttactgagccgcaaaaggagtcagaaattaaa
ctagtgaaaaaacgtgttcgttcaacgagtactgaagacgatacaagtacaactgaaact
tcatcatcggattctgacagttcagatgactcccctaaaaggaagaagaggaagcgtaag
aagcataaaaaacgtaagtcggctaaaaaagaaagcacaaccgagtctgatacaaactca
gattcgtcagattccagttcggaggaagataaacacaggaaaaaatcaaagaaatcgaaa
agtaaaaacaaaccttctaagaagaagaagaaatcaaaacacaaatga
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integrated database retrieval system
