Novosphingobium resinovorum: BES08_17735
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Entry
BES08_17735 CDS
T04490
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nre
Novosphingobium resinovorum
Pathway
nre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BES08_17735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nre03019
]
BES08_17735
03016 Transfer RNA biogenesis [BR:
nre03016
]
BES08_17735
Enzymes [BR:
nre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BES08_17735
Messenger RNA biogenesis [BR:
nre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BES08_17735
Transfer RNA biogenesis [BR:
nre03016
]
Prokaryotic type
tRNA degradation factors
BES08_17735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
DUF2152
Motif
Other DBs
NCBI-ProteinID:
AOR78388
UniProt:
A0A1D8A8D9
LinkDB
All DBs
Position
3775328..3777631
Genome browser
AA seq
767 aa
AA seq
DB search
MFDVKTVSMEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLTSRLIDRPVRPLFPEGFYNEINVIAQVLSY
DGETEADIVAMIAASAALTISGVPFMGPIGAARVGFVDGEYTLNPKQTAALTDGRLDLVV
AATGDAVMMVESEAKELTEEEMLGAVVFAHDEIKKVVNLIIDLAEKAAKEPWDIDLSDNT
ADIKAKLKKAVGKDVTAAYKLTDKSARSNALNAARAKAKEAFAGETPQLQMVAIKTMKKL
EADIVRGAILKDGKRIDGRTLEQVRPIEAIVGFLPRTHGSALFTRGETQSICTTTLGTKD
AEQMIDGLEGLSYSSFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPAKED
FPYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLVRPVSGIAMGLILEGKDFAVLSD
ILGDEDHLGDMDFKVAGTEVGITTMQMDIKIAGITREIMAKALEQAKAGRAHILGEMTKA
LGSSRTELSAHAPRIETIQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISSS
DIAQIEAAKKWILGIVEEAEVGKVYQGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVE
KPTDVVKEGQEVYVKVLEIDQRGKVRLSMRVVDQETGAELEDTRPPREPREGGDRGPRGG
GDRGGDRRGPRRDGGGRGGDRGPRGPRRDGGGEGGNPNHMPAFLKED
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgtaaagaccgtaagcatggagtggggcggcaagaccctcaccctcgaaacc
ggccgcatcgcccgtcaggctgacggcgccgtcctcgcaacctacggcgagaccgtggtg
ctctgcgcggtgaccgccgcgaagtcggtgaaggaaggccaggacttcttcccgctgacc
gtccactaccaggaaaagtattcggccgcgggccgcatccccggtggcttcttcaagcgt
gagcgcggcgcgaccgaaaaggaaacgctgaccagccgcctgatcgaccgtccggtccgc
ccgctgttccccgaaggtttctacaacgaaatcaacgtcatcgcccaggtcctgagctat
gacggcgagaccgaggccgacatcgtcgcgatgatcgccgcttcggccgcgctgaccatc
tcgggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggcttcgtcgacggcgag
tacacgctgaacccgaagcagaccgctgctctcaccgacggccgcctcgatctcgtcgtc
gccgccaccggcgacgccgtgatgatggtggaatcggaagccaaggagctgaccgaggaa
gagatgctaggtgccgtcgtgttcgcgcatgacgagatcaagaaggtcgtcaacctcatc
atcgacctggcggaaaaggccgccaaggagccttgggacatcgacctgtcggacaacact
gccgacatcaaggcgaagctcaagaaggccgtcggcaaggacgtcaccgcagcctacaag
ctgaccgacaagtcggcccgctccaacgccctcaacgccgcgcgcgccaaggccaaggaa
gcgttcgcgggcgaaaccccgcagctccagatggtcgcgatcaagaccatgaagaagctg
gaagccgacatcgttcgcggcgccatcctcaaggacggcaagcgcatcgacggccgtacg
ctggagcaggttcgtccgatcgaggcgatcgtcggcttcctgccgcgcacccacggttcg
gcgctgttcacccgcggtgaaacgcagtcgatctgcaccaccacgctgggcaccaaggac
gccgagcagatgatcgacggcctcgagggcctgtcgtactcgtcgttcatgctgcactac
aacttcccgccctactcggtcggtgaagtgggccgcttcggcgccccgggccgccgcgaa
gtcggtcacggcaagctggcatggcgcgcgctgcacccggtgctgcccgccaaggaagac
ttcccctacacgatccgcgttctctcggacatcaccgagtcgaacggttcgtcctcgatg
gccaccgtctgcggcggttcgctgtcgatgatggacgccggcgtgccgctcgttcgcccg
gtttcgggcatcgccatgggcctgatcctggaaggcaaggacttcgccgtcctgtccgac
atcctgggtgacgaagatcacctcggcgacatggacttcaaggtcgcgggcaccgaagtc
ggcatcaccacgatgcagatggacatcaagatcgcgggcatcacgcgcgagatcatggcc
aaggctctggagcaggccaaggccggccgcgcccacatcctgggcgagatgaccaaggct
ctcggctcgtcgcgcaccgaactgtcggcgcacgcaccgcgcatcgagacgatccagatc
gacaagtcgaagatccgtgacgtcatcggcaccggcggcaaggtcatccgcgagatcgtc
gccgagaccggcgccaaggtcgacatcgacgacgaaggcgtgatcaagatctcgtcctcg
gacatcgcgcagatcgaggccgccaagaagtggatcctcggcatcgtcgaggaagcggaa
gtcggcaaggtctatcagggcaaggtcgtcaacatcgtcgacttcggcgccttcgtgaac
ttcatgggcggcaaggacggcctcgtccacgtctccgaaatgaagaacgagcgcgtggaa
aagcccaccgacgtcgtcaaggaaggccaggaggtctacgtcaaggtcctcgagatcgac
cagcgcggcaaggttcgcctgtcgatgcgcgttgtcgatcaggaaaccggcgccgagctg
gaagacacccgcccgccccgcgaaccgcgtgaaggcggcgaccgtggcccgcgtggtggc
ggcgatcgcggcggtgaccgtcgtggcccgcgccgtgacggcggtggtcgcggtggcgat
cgcggtccccgtggtccgcgccgcgatggtggtggcgagggcggcaacccgaaccacatg
ccggctttcctcaaggaggactga
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