Nodularia sphaerocarpa: BDGGKGIB_00735
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Entry
BDGGKGIB_00735 CDS
T08134
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BDGGKGIB_00735 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsph03019
]
BDGGKGIB_00735 (pnp)
03016 Transfer RNA biogenesis [BR:
nsph03016
]
BDGGKGIB_00735 (pnp)
Enzymes [BR:
nsph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BDGGKGIB_00735 (pnp)
Messenger RNA biogenesis [BR:
nsph03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BDGGKGIB_00735 (pnp)
Transfer RNA biogenesis [BR:
nsph03016
]
Prokaryotic type
tRNA degradation factors
BDGGKGIB_00735 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
KhpA-B_KH
KH_2
aRib
SLS1_KH2
Motif
Other DBs
NCBI-ProteinID:
ULP71112
LinkDB
All DBs
Position
complement(836068..838224)
Genome browser
AA seq
718 aa
AA seq
DB search
MAEVDKSISFDGRDIRLKVGLLAPQAGGSVLIESGDTSVLVTATRAKGREGIDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPEKTILTSRLIDRPMRPLFPSWLRDDLQIIAFTLSMDE
LVPPDVLAVTGASIATLMAQIPFNGPMAAVRVGLVGDDFIINPTYAETENGDLDLIVAGS
PHGVIMVEAGANQLPEQDIIEAIDFGYEAVRDLIKAQQDLLAEMGLKIVQEAPPEEDPTL
SNYIRDRVSDDIKKILSQFEYTKAQRDNALDIVKEQVASAIAELPEENEVRLAATANSKA
LGNTFKDITKHFMRRQIVDDNVRVDGRKLDEVRPVSCQVGVLPKRVHGSGLFNRGLTQVL
SACTLGTPGDAQNLNDDLQTDQSKRYLHHYNFPPFSVGETKPMRFPGRREIGHGALAERA
LIPVLPSKEAFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPILKPVSGAAMGLIK
EGDEVRVLTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKISGLSLDVIAQAVHQAKSAR
LHILDKMLQTIQEPRVETSPYAPRLLTIKIDSDMIGLVIGPGGKTIKGITEETGAKIDIE
DDGTVTISAVDESRAKKARNIIQGMTRKLHEGDVYAGRVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIIKVREIDGKGRINLTRLGIHPDQATAAREAAAVNR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagttgataagtcaatatcctttgatggtagggatattagactgaaagtaggc
ttactggctccccaagctggtgggtcggttttgatagaatcaggggatacatctgtttta
gtgacggctacgcgagccaagggcagagaaggaattgattttcttcccctaacagtagat
tacgaagaaagactgtatgccgcaggtaggattcccggaggaatcatgcggagagaaggt
cgtccaccagaaaaaaccattctgactagccggctgattgaccgccccatgagacctttg
tttccttcatggttgcgcgatgacttgcaaattatcgcctttacgttgtcgatggatgag
ttagtaccacctgatgtcttagcagtgactggtgcttccattgctacgctgatggcacaa
attccgtttaacggaccaatggcagcagtgcgggtgggtttagtgggagatgatttcatt
attaaccccacctatgcagaaactgaaaacggagacttggatctgattgtggctggttca
ccccacggtgtgatcatggtggaggcgggagccaatcaattgccagagcaggatattatt
gaagcaattgattttggttacgaagcggtaagagatttaattaaagcgcagcaagatttg
ttggcggaaatgggtctgaaaattgtgcaagaagcaccaccagaggaagaccccactctg
agcaattatatccgcgatcgcgtcagcgatgatattaagaaaattctgtctcaatttgaa
tacaccaaagcccaacgggataacgctttggatattgtaaaggagcaagttgcgagtgcg
atcgcagaattaccagaagaaaacgaagttcgactggctgcaactgcaaacagcaaagca
cttggtaacacctttaaagacatcaccaaacacttcatgcgccgtcaaatcgttgacgac
aacgtgcgcgttgatggtcgcaaactcgatgaagtccgtcctgtgtcttgtcaagttggt
gttttacccaagcgagtccacggtagtggtttatttaatcggggtttaacccaagtatta
tccgcctgtaccctgggtactcctggagatgctcaaaacctcaacgatgacttgcaaaca
gaccaatccaaacgttacctgcatcattacaactttcctcccttctcagttggggaaact
aaaccgatgcgtttcccaggaaggcgcgaaatcggtcacggtgctttagcagaacgagcg
ctcatccctgtacttccctcaaaagaagcattcccctacgtgattcgcgtagtttcggaa
gtcctttcttccaacggttccacttctatgggttcagtgtgcggttccactctagccttg
atggatgctggtgtacccattctcaagcccgtaagcggtgcagcaatgggtttgattaaa
gaaggtgatgaagtgcgagtcctgactgatattcagggcattgaagacttcttaggcgat
atggattttaaagtcgccggcacagataccgggattaccgccttgcaaatggatatgaaa
atatccggtctgtcgttggatgtgattgcccaagccgtccaccaagcgaaatccgcccgg
ttgcatattctggataaaatgctccagactatccaagaaccacgggttgaaacctcaccc
tatgccccacgtctattgactatcaagattgattcagacatgattggtctggtcattggc
cccggaggtaaaaccatcaagggcatcaccgaagaaactggtgcgaaaattgacatcgaa
gacgatggcaccgtgacgatttcggctgtggatgaaagtagagctaagaaagctcgtaac
atcattcaaggcatgactcgtaagttacacgaaggtgatgtttatgctgggcgtgtgact
cggattatccccattggtgcatttgtagaatttctgcctggaaaagaaggcatgattcac
atttctcaattagctgattatcgcgttggcaaagttgaagatgaagtagctgttggggat
gaagtgattatcaaagtgcgcgaaattgacggtaaaggacgaattaatctcacacgtttg
ggtatccacccagatcaggcgactgcggcgcgagaagctgcggcggtgaatcgataa
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