Nodularia sphaerocarpa: BDGGKGIB_03889
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Entry
BDGGKGIB_03889 CDS
T08134
Symbol
vanB
Name
(GenBank) Vancomycin B-type resistance protein VanB
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
nsph
Nodularia sphaerocarpa
Pathway
nsph00470
D-Amino acid metabolism
nsph00550
Peptidoglycan biosynthesis
nsph01100
Metabolic pathways
nsph01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
nsph00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BDGGKGIB_03889 (vanB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BDGGKGIB_03889 (vanB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BDGGKGIB_03889 (vanB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
BDGGKGIB_03889 (vanB)
Enzymes [BR:
nsph01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BDGGKGIB_03889 (vanB)
Peptidoglycan biosynthesis and degradation proteins [BR:
nsph01011
]
Precursor biosynthesis
Amino acid ligase
BDGGKGIB_03889 (vanB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
ATP-grasp_4
ATP-grasp
RimK
CPSase_L_D2
ATP-grasp_3
Motif
Other DBs
NCBI-ProteinID:
ULP74226
LinkDB
All DBs
Position
complement(4620577..4621638)
Genome browser
AA seq
353 aa
AA seq
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MPLLKILHLVGSAQNEFYCDLSRLYAQDCLVATAERSRYNFQIAYITPDSHWRFPRSLNL
EDIAIAKPISLVEAIQFITAQNIDLVLPQMFCIPGMTYYRALFDLLKIPYVGNSADIMAI
ASHKARTKAIVAAAGVKVPRGELLRPGDVPTITPPVVIKPVSSDNSLGVALVKEASDYEA
ALQTAFEYADEVIVEKFIELGREVRCGIIVKDGDLVGLPLEEYKLDPNEKPIRSYADKLQ
KTDDGNLHLTAKDNIKAWIVDPSDPITQRVQEVAKMCHQALGCRHYSLFDFRIDPQGQPW
FLEAGLYCSFAPKSVISCMAKAQGIPLNELFMTIIHETLSSIDQKKIQIQNSK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgccattacttaaaatcctgcacttagtcggttctgcacagaatgaattttactgtgat
ttgtcacgcctttacgcccaagattgcttagttgcaacagcagagcgatcgcgctataat
tttcagattgcatacattacacctgatagccactggcgatttcctcgctctcttaatcta
gaagatatcgcgatcgctaaaccgatttctctggttgaagcaatacaatttatcacagcg
caaaacattgatctcgtgttaccacaaatgttttgtattccgggtatgacttactaccgc
gctttattcgacctgctcaaaattccttacgtaggtaatagtgcggatattatggcaata
gccagccacaaagccagaactaaagcaattgtcgccgcagcaggggtgaaagtaccacgc
ggagaactgcttcgcccaggagatgtgccaacaattacacctccagtagtgattaaacca
gtaagttctgacaattctttaggggtggctttagttaaggaagctagtgactatgaggct
gctttgcaaacagcatttgagtatgcagatgaagtgattgtggaaaaattcattgaactc
ggacgagaagtcagatgtggtatcattgtcaaagatggggacttagtgggtttaccccta
gaagaatataaattagaccctaacgagaaacccatccgcagctatgctgataaactccaa
aaaaccgatgatggtaacttgcatttaacagcgaaagataatatcaaagcttggattgta
gatcctagcgaccccattacccaaagggttcaggaagtggctaaaatgtgtcatcaggct
ttgggttgtcgccactacagtttatttgattttcgcatcgatccacagggacaaccttgg
tttttagaagccggcttgtattgttcttttgctcctaaaagtgtgatatcctgtatggcg
aaagcacagggaattcctctgaatgagttattcatgacgattattcatgaaacattgagc
agtattgaccaaaaaaaaatccaaattcagaattcaaaatag
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