Notechis scutatus (mainland tiger snake): 113417797
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Entry
113417797 CDS
T09026
Symbol
CACNA1F
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1F
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04010
MAPK signaling pathway
nss04020
Calcium signaling pathway
nss04260
Cardiac muscle contraction
nss04261
Adrenergic signaling in cardiomyocytes
nss04270
Vascular smooth muscle contraction
nss04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113417797 (CACNA1F)
04020 Calcium signaling pathway
113417797 (CACNA1F)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
113417797 (CACNA1F)
09153 Circulatory system
04260 Cardiac muscle contraction
113417797 (CACNA1F)
04261 Adrenergic signaling in cardiomyocytes
113417797 (CACNA1F)
04270 Vascular smooth muscle contraction
113417797 (CACNA1F)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nss04040
]
113417797 (CACNA1F)
Ion channels [BR:
nss04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113417797 (CACNA1F)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
HemY_N
Motif
Other DBs
NCBI-GeneID:
113417797
NCBI-ProteinID:
XP_026532158
Ensembl:
ENSNSUG00000014884
UniProt:
A0A6J1UUD4
LinkDB
All DBs
Position
Unknown
AA seq
1999 aa
AA seq
DB search
MSKSECNGGPLGSPEAPPRSAAEAFVEASGQAIAWTLTSGGSDTLGSTGSLAQKKRQQQN
KHKTQGSNVVHRSPRALFCLRLNNPIRRAAISIVEWKPFDILILMTIFANCVALGVYIPF
PEDDSNVSNHNLEQVEYIFLIIFTVETFLKILAYGLVMHPSAYIRNGWNLLDFVIVVVGL
FSVILEQVSHKPGEAHHMSGKPGGFDVKALRAFRVLRPLRLVSGVPSLHIVLNSIMKAMV
PLLHIALLVLFVIIIYAIIGLELFIGRMHKTCFIIDSDLEAEEDPSPCAFSGHGRECTVN
NSECRGKWDGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWMQDAVGHELPWVYFVSL
VIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEEDLKGYLDWLMQAEDIE
PDEEKDETSEKHTYITVADLMEKKRKKKWFKHSSHSSDSHTSLPASESTSVNTENVEDEE
HLRSHCYDVCLXLSKTKFGRHVQRINRLFRKKCRLAVKSVSFYWMVLLLVFLNTLTIASE
HYRQPYWLTQIQAYANKVLLSLFTLEMLLKMYSLGLQAYFVSFFNRFDCFVVCGGILETV
LVEFEIMQALGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIII
FSLLGMQLFGGKFNFDETQTKRSTFDTFPQALLTVFQILTGEDWNAVMYDGIMAYGGPYF
PGMLVCIYFIILFICGNYILLNVFLAIAVDNLADGDDINSSKEEKGREENTEDRVEGGEE
EGEEEEAVGESNEGAGEEEVADQQSLGESHLDKLEDTSKEKVVPIPEGSAFFCLSQTNPL
RVGCHKLIHHHIFTNLILVFIILSSISLAAEDPIRAHSFRNNILGYFDYAFTSIFTVEIL
LKMTSYGAFLHKGSFCRNWFNLLDLLVVSVSLISFGIHSSAISVVKILRVLRVLRPLRAI
NRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYSCTDEAKHTPIEC
KGTFIVYKDGDVAHPMVRERLWLNSEFNFDNVLSGMMALFTVSTFEGWPALLYKAIDAYA
ENQGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFRAQGEQEYKNCELDKNQRQC
VEYALKAQPLQRYIPKNKYQYKFWYMVNSTCFEYIMFVLILLNTIALAVQHYEQSEPFNN
VMDLLNMVFTGLFTVEMFLKIIAFKPKHYFVDAWNTFDALIVVGSIVDIAVTEINSAGLQ
ESSEDSSRISITFFRLFRVMRLVKLLSKGEGIRTLLWTFIKSFQALPYVALLIAMIFFIY
AVIGMQTFGKIAMQDSTAINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCDPE
SDFEPGEEFTCGSNFAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDE
FKRIWSEYDPAAKGYIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTV
TFNATLFALVRTSLKIKTEGDLDMANRELRSVIKKIWKRTKPKLLDEVLPVAEGEEITVG
KFYATFLIQDYFRKFRKRKEKGLLGPDGSPSNSSALQAGLSCLQVLGPEIRRAMSCDLEG
KEEEEEEEEEAEEVEEKIIEEETAIYKSSELYSEAPDHRTSVAETPTEQEVKTMASQHLS
KTSSSHALNGLKPYEENLSGSDEPADLPVVSIQRRINRQRSSFPPTVEEVVNQTELCIED
TSAEQGSNSREEDSENLPPHDKQSQRHNPQSHQHHWQSGYGGSVPLLSHRVNSRLIKGVL
DGRQTKRRRLLPATPADRKPAFSIQCLQRQDSCDDIPIPGTYHQKAPLGPTSSSQSWATP
PKRGRLLYAPLILVEEERVPGYSWEKNSSSLPPMSQAHCLKVPSPLRHSSGGRSGSADSL
VEAVLISEGLGEYAQDPNFVAFTKREIADACHMTLDEMESAATDLLSRKSAGLVYSDEES
FRSHEEEDLADEMICITTY
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcggagtgcaacggaggaccattgggctctccagaggcaccaccccgatca
gcagccgaggcttttgtggaagcatcaggccaggccatagcatggacgcttacgagtgga
ggttcagatactttgggctctactggcagccttgctcagaagaagcgtcagcagcagaac
aagcataagacccagggctccaatgtggtgcaccgttcaccacgagccctcttctgtcta
cgtttgaacaatcccatccgcagagctgctatcagcattgtagagtggaaaccttttgac
atcctcatccttatgacaatctttgctaattgtgtggccttaggagtctatattcccttt
ccagaagatgattccaatgtctccaaccacaacttggagcaagtggaatatatttttctc
atcatcttcacagtggaaactttcctcaagatccttgcctatggtctggtcatgcatcct
agcgcctatattcgcaatggctggaatcttcttgattttgtcattgttgtagtgggtctc
ttcagcgtcattctggaacaagtctcccacaagcctggggaggcccatcacatgagtggg
aagccaggcggctttgacgtcaaagccctgcgagcttttcgtgtcctgcgacctctgcgt
ctggtctctggcgtccctagtctgcatattgtcttgaattctatcatgaaagccatggtg
ccccttctgcacatagcactacttgttctttttgtcatcatcatctatgccatcattggc
ttggagctcttcattggtcgcatgcataagacctgcttcatcattgattcagatctggag
gctgaggaagacccgtcaccttgtgctttttctggacacggtcgggaatgcacagtaaac
aatagcgaatgtcgtggcaagtgggatggacccaatggtggaattaccaattttgacaac
ttcttttttgccatgcttactgtcttccaatgcattaccatggaaggttggactgatgtt
ctctactggatgcaagatgcagtgggtcatgaactgccgtgggtttattttgtcagcctt
gtcatctttggctctttctttgtgcttaatttggttttgggtgtgttaagtggggaattc
tctaaggaacgagagaaggcaaaagcccggggagactttcaaaagctacgagagaaacaa
cagatggaagaagatctgaagggctacctggattggctcatgcaagcagaagacattgaa
cccgatgaagaaaaagatgagacaagtgaaaagcatacttacattactgtggccgacctg
atggaaaagaagaggaagaagaaatggttcaagcatagcagtcattcctccgacagccac
accagtcttcctgccagcgaaagtacctcagtcaacacggagaacgttgaagatgaagag
caccttcggagccactgctatgatgtgtgtttgtgactttccaagaccaaatttggccgc
catgtacagcgcatcaaccgactttttcggaagaaatgtcgtttggctgtcaaatctgtc
tctttctactggatggttctactccttgtgtttctgaataccctcaccattgcttctgaa
cattacaggcagccttactggctcacccaaatccaagcttatgctaataaagtattgttg
tcactgttcaccctggagatgctgctgaagatgtacagcctaggccttcaagcctatttt
gtcagcttcttcaatcgttttgactgttttgtggtatgtggtgggattttggagactgtc
ctggtagaattcgagatcatgcaagcccttggaatctccgtgctccgttgtgtccgcctc
ctgcgaatcttcaaagtaaccaggcattgggcctccctgagcaaccttgtggcttctttg
ctgaattccatgaagtccattgcctccttacttctactgctgttcctcttcattatcatc
ttctccttgctaggcatgcaactctttggtggcaaatttaactttgatgagactcagacc
aaacgcagcacctttgacactttcccccaagccttgctcactgtcttccagatactgaca
ggggaagattggaacgcagtgatgtatgatgggatcatggcctacggtggcccctatttt
cccggcatgctggtctgcatctatttcatcattctctttatttgcggcaactatatctta
ctcaatgtcttcttggctattgcagtggacaatcttgctgatggagacgatattaattcc
tccaaagaagagaaaggaagagaagaaaacactgaagatagagtagaaggtggtgaggaa
gagggggaagaggaggaggctgtaggagaaagtaatgaaggagcaggagaggaagaggtg
gcagatcagcagagtttgggagagtcccacctagacaaactggaagacacttctaaggag
aaagttgtaccaattcctgagggaagcgcctttttttgccttagtcaaacaaaccccctt
cgtgttgggtgccacaagctgatccaccatcacatcttcaccaatctcatccttgtcttc
atcattcttagcagcatctctttggcagctgaagatcccatccgagcacactccttccgc
aacaatattttgggctactttgactatgccttcacatctatcttcactgttgagatcttg
ctcaagatgacttcatatggtgccttcctgcacaagggctcattctgccggaactggttt
aatctcctggatctgcttgttgtcagtgtctcactcatctcttttggcatccactccagt
gccatatctgtggtgaaaatcttgcgggtactgagggtactccgtcctctccgagccatc
aaccgagccaaagggctgaagcacgtggtacaatgtgtgttcgtagcaatccgcaccatt
ggaaatatcatgattgtcaccaccttgctgcagttcatgtttgcttgcattggtgttcaa
ttattcaagggcaaattctatagctgcacagatgaggccaagcataccccaattgagtgc
aaaggcacattcattgtgtacaaggatggagatgtggctcacccaatggtgcgtgagcgc
ttgtggctcaacagtgagttcaactttgacaatgtgctgtcaggcatgatggctctcttc
actgtctccacttttgaaggatggccagcgctcttgtacaaagctattgatgcctatgca
gaaaaccaaggaccaatatacaattaccgggtggagatctccatcttcttcattgtctac
atcatcattattgccttcttcatgatgaatatttttgtgggctttgtcatcatcactttc
cgggcccaaggagagcaggaatacaaaaactgtgagctggacaagaaccagcggcaatgt
gtggaatatgccttgaaggctcaacccttacaacgctatattccaaagaacaaatatcag
tacaaattctggtatatggtcaattccacctgttttgaatacatcatgtttgtgctgatc
ttgctgaacactattgctttggctgtacagcactatgaacaatcagagccttttaataac
gtgatggatctgctcaatatggtgttcacaggcctcttcactgttgaaatgtttctgaag
attattgccttcaagcccaagcactactttgttgacgcatggaatacctttgatgctttg
atcgtggttgggagtatagtagacattgctgttactgaaatcaacagtgcgggcttgcag
gagagctcagaggacagttcccgtatctctatcaccttcttccgcctcttccgtgtcatg
cgcctggtcaagctcctcagcaaaggtgagggtatccgtaccctcctctggactttcatc
aaatctttccaggctttgccatatgtggccctccttattgccatgattttctttatctac
gctgtcattggcatgcagacctttggcaaaatagctatgcaagatagtacagccatcaat
cgcaacaataatttccagacctttccacaagctgtgttgctgcttttcaggtgtgccaca
ggggaagcctggcaggagatcatgctagccagcttgcctggcaagcgctgtgaccctgag
tctgattttgaacctggggaggaattcacttgtggtagcaactttgctattgtctatttc
atcagcttcttcatgctgtgtgccttcctgatcattaacctctttgttgctgtcatcatg
gacaattttgactatctcactcgggactggtccattctgggtccccaccacctggatgag
ttcaagaggatctggtcggaatacgatccagctgccaaaggttacatcaagcatctggat
gtggtgactctattgcgccggatacagccacctctgggttttgggaagctctgtccccac
cgagtggcctgcaaaaggctggtggccatgaacatgccattgaactcagatggaactgtc
actttcaatgccaccctttttgctctggtgcgtacgtcactaaagatcaagacagaagga
gacctggatatggccaatagggaactccgttctgtcatcaaaaagatctggaaacggacc
aagcccaaattactggatgaggtgttacctgttgcagaaggggaagagataactgtagga
aaattctatgccacattcctgatccaagattatttccgtaaattccgtaagcggaaagaa
aagggactgcttggaccagatgggtccccaagcaactcctccgccttgcaggctggactg
agctgcttacaagttctagggcctgagatccgcagagcaatgtcctgtgacctggaagga
aaagaggaagaggaggaggaggaggaagaagcagaagaagttgaggagaaaatcattgag
gaagagacagccatttacaagagttctgagttgtatagtgaagcccctgaccaccgtacc
tcagttgctgagactccaacagaacaagaagtcaagactatggcctctcagcacctctct
aagaccagctcctcccatgcattaaatgggctgaagccctatgaagagaaccttagtggc
agcgatgagcctgctgacttgcctgttgtttccattcaacgcaggataaacaggcaacgc
tccagtttcccaccaacagtagaagaagtagttaaccaaactgaactttgtatagaggac
acctcagctgagcagggaagcaatagccgggaggaagactctgaaaacctgcccccccat
gacaagcagtctcagcggcacaaccctcagtcccaccagcatcactggcagagtggctac
gggggctctgtgcctctgctctcccatcgggtcaacagcagactcatcaaaggagtactg
gatggcaggcaaaccaagcgccggcgcctcttgccagccactcccgcagaccgcaaacca
gcctttagcatccagtgcctgcagcgtcaagacagctgcgatgacatccccatcccaggc
acctaccaccaaaaggcaccactgggcccaacatcttcctcgcaatcatgggccacacct
ccaaaacggggccggctgctctatgctccgctcatcctagtggaggaggagagggtgcca
ggatacagctgggaaaaaaatagcagcagccttccacccatgtcgcaggctcactgcctc
aaggttccaagcccactccggcacagctccggtggcagatctggcagcgcagacagtctg
gtggaggcggtgctcatctccgaaggcctaggcgagtacgcgcaggacccaaattttgtg
gcctttaccaagcgggagattgctgatgcatgccacatgactctggatgaaatggaaagt
gctgccacggacttgttgagtcgcaagtctgctggccttgtttatagtgatgaagaaagc
ttccgttcccatgaggaagaggacttggctgatgagatgatctgcatcaccacttattga
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integrated database retrieval system
