Nicotiana sylvestris (wood tobacco): 104212347
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Entry
104212347 CDS
T05026
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 51-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104212347
03009 Ribosome biogenesis [BR:
nsy03009
]
104212347
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104212347
Spliceosome [BR:
nsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104212347
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
90S particles
Helicases
104212347
Pre-60S particles
104212347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
Pox_Ag35
eIF3_subunit
Motif
Other DBs
NCBI-GeneID:
104212347
NCBI-ProteinID:
XP_009759871
UniProt:
A0A1U7UV10
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MAEVEENPNIVVAEEESIKKKRKRKRDKKNKMAIEKETKKEEESEGKEEEENEEEEQHNE
LKEEIKKGMKSGSGIMTTELFSSLEISEATMKAINDMGFQHMTQIQARAIAPLLEGKDVL
GAARTGSGKTLAFLIPAVELLYNVRFTPRNGTGVIVICPTRELAIQTHAVAKDLLKYHSQ
TLALVIGGSARRAEAERIAKGANLLVATPGRLLDHLRNTKGFIYKNLKCLMIDEADRILE
ANFEEDMQQIIKLLPKQGRQTALFSATQTKKVEDLARLSLDKPVYIDVDDGRRRVTNEGL
QQGYCVVPSAKRFLLLYSFLKRNLSKKIMVFFSSCNSVKFHSELLRYIKIECCDIHGKQK
QQKRTSTFFEFCEAKTGILLCTDVAARGLDIPAVDWIVQFDPPDEPKEYIHRVGRTARGE
GAKGNALLFLIPEELQFLKYLKAAKVPVKEYEFDHKKVANVQSLLEKLVANNYYLNQSAK
EAYRSYILAYNSHSMKEIFNVHRLDLQAVASSFCFSNPPKVHLNIDSNASKFRNKKRKVE
GSRNGFSDSNPYGKKGSDDTRQFVRY
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtagaagaaaaccctaatatagtagttgcagaagaagagtcaattaagaag
aagcgaaagagaaagagagacaagaagaataaaatggccatagaaaaagagacgaagaag
gaagaagaaagcgagggcaaagaagaagaagagaatgaggaagaagagcagcataatgaa
ctaaaggaggagattaagaaagggatgaagagtggttccggtattatgactacggaattg
ttttcttctcttgaaatttctgaggccactatgaaggccatcaacgacatgggctttcag
cacatgactcagatccaagccagggcaattgctcctcttctggaaggcaaagatgtcctt
ggagctgcaagaactggttctggtaaaacgcttgcatttctgataccagccgtggagttg
ttgtataatgtccgttttacacctcgtaatggaactggggttattgtcatttgcccaaca
agagaactggctatacagacgcatgctgtggcaaaggaccttctcaagtatcattcacag
actctcgccttggttattggtggttcagcaagaagagcagaggcagagcgtattgcaaaa
ggggctaatctcttagtagccacccctggtcgacttcttgatcatcttagaaataccaaa
ggcttcatttataagaacctaaagtgtctcatgattgatgaggctgataggattttggaa
gcgaactttgaggaagacatgcaacaaatcattaaacttctaccaaagcaggggaggcag
actgctctcttttcagccacacaaacaaaaaaggttgaggaccttgctcgcttatctttg
gacaaacctgtctacattgatgtggatgatgggaggaggagggttacaaacgaagggctg
caacaaggatactgtgttgtcccaagcgctaagagatttcttctcctttattcattcttg
aagaggaacctgtcaaagaaaataatggttttcttctcatcttgcaactctgtcaagttt
cattccgagctacttcgctatatcaagattgaatgctgtgatattcatgggaagcaaaag
cagcaaaaacgaacgtctaccttttttgaattctgtgaagcaaaaacaggcatcctgtta
tgcacggatgtcgccgcacgtggtcttgatattcctgctgtggattggattgtgcagttt
gatccccctgatgaacccaaggagtatatacacagagttggtcgaacagcgcgcggggaa
ggtgctaaaggaaatgcattactattcttgattccagaagagttgcagtttcttaagtac
ctcaaggcggcaaaagtgcctgtaaaagaatatgaatttgatcataagaaggtggccaat
gtgcagtcactcctggaaaaattggtcgcaaacaactattacttgaaccagtcagctaaa
gaggcatataggtcctatatactagcatataattctcattccatgaaggaaatattcaat
gttcaccgacttgatctacaggctgtagcttcttcgttctgtttctcaaatcctccaaaa
gtacacctcaacatagatagcaatgcatccaagttcaggaacaaaaagcgaaaagttgag
ggaagccgaaatgggttcagtgatagcaatccttacggaaagaaaggaagtgacgatacg
aggcagtttgtaagatattag
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