Nicotiana sylvestris (wood tobacco): 104222704
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Entry
104222704 CDS
T05026
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsy03000
]
104222704
03036 Chromosome and associated proteins [BR:
nsy03036
]
104222704
Transcription factors [BR:
nsy03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
104222704
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104222704
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
104222704
NCBI-ProteinID:
XP_009772278
UniProt:
A0A1U7W0Z0
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MEDEEEKLIEMEEQQQDVVEKASPSASDDSFINDDDDSDDGNQQSPPEEPLTDKEIEELI
AELLETESKAAEAQEALEEESIAKVEADVRAELAQSLSGDELEKAVADEMAIFKEDWENV
LDELETESAHLLEQLDGAGIELPSLYKWIESQAPNGCCTEAWKNRTQWVGSELTNDITGA
IADAEKYLQIHRPVRRRHGKVLEEGASGFLAKKLAGNDGSETQGGSSDVDWGSFSKLCSD
NSSSSMGTISFGSKDWASVYLASTPQQAAELGLKFPGVDEVEEIDDIEDSSVDPFVADAI
ANERELNLSEEQKRKYKKVKEEDDLKIDLKLRRRLKQRRHRNMQKLEEIQEDTTDDMNGS
LSQDVDFHTNRYSTIDDGDVPSSKCLPETDSEAKGLKRVHNSEEMEAQSKKPRIITLDSD
EEDLPGEKLSPTCSLSEMGDQSNPQMNGDDVLPINSLPAFNEKQNFRCTACDKLAVELRA
HPLLKVIVCLDCKNSMKAKMQDVDCSECYCRWCGRCSDLLSCKSCKRLFCSVCVRRNLGE
ETLLGIKTSGWQCCCCSPSILHPLVSELEKIMESQGLVDSSTDTDSDNSDASDADVNGHR
STKRRRKKKIRRILDDTELGEETKRKIAIEKERQERLKSLGAKYSSETMFMNSGVCCKTS
YESGSLEMLGDVETGYIVNVVREDGEEAVRIPPSISAKLKAHQVAGIRFMWENIIQSIRK
VKSGDKGLGCILAHTMGLGKTFQVISFLYAAMRSVDLGLRTALIVTPVSVLHNWRQEFIK
WRPSELKPLRVFMLEDVPRERRAELLKKWTLKGGVFLIGYTAFRNLSLGKHIKDRHVARE
ICQVLQDGPDILVCDEAHIIKNTRADVTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDF
VREGFLGSSHEFRNRFQNPIENGQHTNSTADDVKIMNQRSHILYEQLKGFVQRMDMNVVK
MDLPPKTVFVMSVKLSPLQRKLYKRFLDVHGFTKDKVSGEKIMKRSFFAGYQALAQIWNH
PGILQLMRENRACSKPEDAVENFLADDCSSDENTDYNTVPGEKLNSNNEALRKNHNGFLH
GDWWSDLLENNCKEVDYSGKMVLLLDILTMSSNVGDKALVFSQSLLTLDLIELYLSKLSR
PGKKGKYWKRRKDWYRIDGKTESSERQRLVDSFNDPLNRRVKCVLISTRAGSLGINLYAA
NRVIIVDGSWNPTHDLQAIYRAWRYGQTKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARV
VDRQQVHRTISKEEMLHLFEFGDDESSDIPLELKQAREHAGEANTTVDVGSVSKQKLTFP
NGSSTSDKLMQSLIDSHHPRWIANYHLHESLLQENEDEKLSKEEQEMAWEVYRRSIEWEE
RRISPDEPVAERQHVSTSESLPKQKPVVSTASLLPPEDSNLVFSMGSTRCRLVPRKCTNL
SHLLTLRSQGTKWGCSTVCGECAQEISWEGLNNRDGRSAK
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaagaggaaaagctcattgaaatggaagaacaacaacaagatgtagtagaa
aaggcttctccttctgcgtccgatgattcttttattaacgatgatgatgattctgatgat
ggcaatcaacaatctcctcctgaggaaccattaactgataaggaaattgaggagctcatt
gctgagcttttagaaactgagagtaaggctgcagaggctcaagaggctttagaagaagag
tcaatagctaaagtggaggctgatgttagggctgagttggcacaatctctttcaggagat
gagttggaaaaagctgtagctgatgaaatggcaatctttaaagaagactgggaaaatgtt
cttgatgaactggagactgagagtgctcatttgttggagcaactggatggtgctggtatt
gaactccctagtctctataagtggatagagagtcaggctcctaatggttgctgcactgaa
gcatggaaaaacaggactcagtgggttggttctgaattgacaaatgacatcactggagca
attgctgacgctgagaagtatcttcagatccacaggcctgtaagaaggcggcatggaaaa
gttttggaggagggtgccagtggtttcttggcaaaaaaacttgctggaaatgatggcagt
gagacgcagggagggagcagtgatgttgattggggctctttcagcaaattatgttctgat
aactcgtcatcatccatgggtaccatttcatttggcagcaaagattgggcctctgtttac
ctcgctagtacaccacaacaagctgctgaactgggactaaaatttcctggagtggacgag
gttgaggagattgatgatattgaagacagttctgttgatccatttgttgcagatgccatt
gcaaatgaaagagagctaaatctttctgaagagcaaaagaggaagtataagaaggttaaa
gaggaagatgatctaaaaattgatttgaagcttcggagacgtttaaaacaaagaagacac
aggaacatgcagaaattggaggagatacaggaagatacaacagatgacatgaacggttcc
ttgtctcaagatgttgactttcacacaaataggtattccactattgatgacggggatgtg
ccatcatcaaaatgcctacctgaaactgattctgaggccaaagggttgaaacgtgtacat
aactctgaggaaatggaggctcaaagtaaaaagcctcggatcattacgctagatagtgat
gaggaggatcttcctggggaaaagttgtctcctacatgcagtttgagtgagatgggagat
cagtccaatccacaaatgaatggagatgatgtgcttcccattaattctcttccggcattt
aatgagaagcaaaattttcgctgcacggcttgtgataaattggctgttgaactacgtgca
catcctcttttgaaagttatagtttgcctggactgcaaaaactcaatgaaagcaaagatg
caggatgttgattgctcagaatgctactgcagatggtgtgggcgttgcagtgatctctta
agttgtaaatcgtgcaaaaggttattttgtagtgtgtgtgtaaggaggaaccttggtgaa
gaaactttattgggaataaaaacatctggttggcaatgctgctgttgctccccaagtatc
ctgcatccattggtttcagagttggagaagatcatggaatctcagggattagtagattct
agcacagacacagattcagataattcagatgcttcagatgctgatgtcaatgggcataga
agcacgaagagacgacgaaaaaagaaaattagaagaatccttgatgatactgagttaggg
gaggagacaaaaaggaaaattgcaatagaaaaggaacgccaagaacgcctcaaatctctg
ggtgcaaaatattcgagcgagactatgttcatgaattctggggtttgttgcaaaacctcg
tatgaaagtggtagcttagaaatgctcggtgatgttgaaactggttacatagttaatgtg
gtgagggaggacggggaagaggcagtaaggattccacccagcatctcagcaaagctgaaa
gcccaccaggttgctgggattcgttttatgtgggaaaatattattcaatctatcaggaaa
gtcaagtctggagataaaggccttggttgcatcctagctcatactatgggtctaggcaaa
acatttcaggtgatttctttcttgtatgccgctatgagaagtgtggatttaggattgaga
actgctctcatagtcacgcctgtaagtgttctgcataactggcgacaggaatttataaaa
tggagaccatcagaattgaagcctctccgtgtctttatgcttgaagatgttccaagggag
agaagggccgagttgctaaaaaaatggacattaaaaggtggtgtattcttaattggctat
actgctttcagaaatttgtcacttgggaagcacataaaggatcgtcacgtggccagagaa
atttgtcaagtccttcaggacgggcctgatatacttgtttgtgatgaggctcatattatc
aagaataccagagctgatgtaactcaagccttgaaacaagtcaagtgccagagaaggatt
gcattaactggatctcctcttcaaaacaatttgatggagtactactgtatggttgatttt
gtaagagaaggatttcttggcagcagtcatgaatttagaaaccgctttcagaatccgata
gaaaatggtcaacacaccaattctacagctgacgatgttaagattatgaatcagcggtct
catattctctatgagcaattgaaaggatttgttcaaagaatggacatgaatgtcgtaaag
atggatttgccgccaaaaactgtctttgtgatgtctgtaaagctttctcctctacagcga
aaattgtataaaagatttctagatgttcatggcttcacaaaggacaaggtctccggtgag
aagataatgaaaagatccttttttgccgggtatcaagccttggctcagatatggaaccat
cctgggattttgcaactgatgcgagaaaacagagcctgtagtaagcctgaggatgctgtt
gagaattttcttgccgatgattgctcaagtgatgagaacacagattataatactgttcct
ggagagaagctgaatagcaacaatgaagctctcagaaaaaatcataatggcttccttcat
ggggattggtggagcgatcttctagaaaataattgcaaagaagttgattatagcggcaaa
atggttctgctactcgacatcctgacaatgagctccaatgttggtgacaaagcacttgtg
tttagtcagagcttgttaactttggatctcattgaactatatctttcaaaactatcgcgc
ccagggaaaaaggggaagtactggaagcgacggaaagactggtacaggattgatggaaaa
acagaatcatctgaaaggcagagacttgttgatagttttaacgacccattaaatagaagg
gttaaatgcgttttaatatctactagagctggatctctgggtatcaacctttatgctgct
aaccgtgtaattatagttgatggctcttggaatccaactcatgatcttcaagctatatat
cgagcttggaggtatggtcaaacaaaacctgtctttgcttaccgtttacttgcacatgga
acgatggaggaaaagatatacaagcgtcaggtaacgaaggaaggtcttgcagcacgggtg
gtcgacagacaacaagtacatagaactatatccaaagaggaaatgttgcatctttttgaa
ttcggagatgacgaaagctctgatatacctctggagttaaagcaagcaagagaacatgct
ggcgaagcaaacacaactgtagatgttggaagtgtttcgaaacaaaagttaacctttcca
aatggaagctctacttctgacaagctaatgcaaagtttgattgacagccatcatccacgg
tggattgcaaattatcatttgcacgagagtctcttgcaagagaacgaggatgaaaagcta
tcaaaagaagagcaggaaatggcgtgggaagtgtatcggagatctattgaatgggaagag
aggcgaatttcgcctgatgagcccgtagctgagcgtcagcatgtctctacttctgaatca
ttgccaaagcaaaagccagtggtttccaccgccagccttttgccgccagaggacagtaat
cttgtattttcaatggggagtacaagatgccgtttggtgccaaggaagtgcacaaactta
tcacatttacttacacttagaagtcaaggaaccaaatggggttgtagcactgtttgtggg
gaatgtgctcaggagataagttgggagggccttaacaacagggatggcagatcagcaaag
tga
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