Nicotiana sylvestris (wood tobacco): 104231552
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Entry
104231552 CDS
T05026
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsy03036
]
104231552
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
104231552
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
Tudor_5
Rad9_Rad53_bind
Xpo1
Motif
Other DBs
NCBI-GeneID:
104231552
NCBI-ProteinID:
XP_009782866
UniProt:
A0A1U7WZM7
LinkDB
All DBs
Position
Unknown
AA seq
1664 aa
AA seq
DB search
MGSKLQLQLKELGSKLDDPPSTKDSLIKLLKQGTTFLSELEQSPPKAMLEAMQPLQAAMV
KLELLKHQDREVKLLVATCICEITRITAPEAPYSDDVLKDIFHLIVSTFSGLGDINSPSF
GRRVVILETLARYRSCVVMLDLECDDLINEMFRTFLSVVRDEHQDSVLTSMQTIMVVLIE
ESEDIREDLLHVILSVLGRHTKDVTIAGRGLAMKVIEECAGKLEPSIKQFLVSSMSGDSR
PTTFEIDYHEVIYDIYRCAPQILSGVVPYITGELLTDQLDVRLKAVHLIGDLFALPGSAI
SEAFQPIFLEFLKRLTDRIVEVRMSVLEHVKGCLLSNPFRQEAPQIISALRERLLDYDEN
VRKQVVAVLCDAACNTITSMKVETIKMVAERIRDKSLLVKKYTLERLADIYRIYCLNSST
GSIKGDEYDWIPGRILRCFYDKDFRSDIVEHILCSSLFPSEFSVKDKVKNWVRVFLSFDK
VEVRALEKLLEQKQRLQQEMRRYLSLRQMHQDGDATEIQKKVVFCFRIMSRCFTDPGKAE
ENFQILDQLKDANVWRILTALLDPNSNSIQASSSRDELLKILGEKHRLYDFLGTLSLKCS
YVLFNKEHVYEILQETNIQKSAGSTDLILCCTHILVILARFCPLLLTGVEEDLIHLLEDD
NEIIKEGVLHVLAKAGGAIREKLGDSSRSLDLMLERICLEGSRRQAKYAVHALASIMKDD
GLKSLSVLYKRLVDMLDEKSHLPAVLQSLGCIAQTAMPVFETREKEIEQFIKKNILERGH
TSEGKTKESWEERSEICSLKIFGIKTLVKSYLPVKDAHLRLGVDDLLGMLKNILSFGEIS
MEMKSSSVDKAHLRLAAAKAMLRLSKHWDHKIPVDIFYLTLGTSEARFPQVKKLFLNKVH
QYLKDRYLDPKYTCAFLLDLQFQQPDFEEIKNSLSDVIQIYQQGKARQLSAQSEPMTPAP
YPEYILPYLIHALAHHSSFPNIDECKDVKAFESIYRQLHLFLSMLVHGDEEGKSEGDTSR
EKESILTINSILHSIKHSEDAVDSAILKNSYAVSDLGLMIAKRLVPNQDDLKESEASVSL
PPSLYKQLEKGEEKDQSLVEVKTWLADESVMVHFESIKFETNGTLKSEITEDEAMKDSET
EGNEVPLGKIMERLKARSKMRKEVKDPEVRTEHDLDILKVLREIDSNNAGDDNKLDASNG
HESAVKTKATNKRQKRKTGTDISVPKGAKRQRSSSSGHKLSAKIKDSIENEDDLLSMSED
KSSEEDVYEPEESDLLTSSIRMKTSFSPKQKRKSTDKTCGDTHEVGVDSRGLKKSKQNTE
AVNTHVESNNMSGSHKQQKKKSIAGLAKCTSKGDTAPTVDLIGCRIKVWWPMDKKFYEGV
IKSFDTQKNKHVVLYDDGDVEVLRLEKECWELVGGGQKPVKGSNSKKGSNSKMVSRHEKV
NGERKNKALAASKQKKETDNMPPLSQVRGKRTPRKNLKYGQKGPSKSSFSRGRLLLGKPL
ATSKSKENNLSSGNSEGEQKESMHGSLSEHELSDKDDRSYSDGKPGADDDDDRSSGMEES
VKEESPLENKKFEDEPGTPLDSRGLDEEISSSHEKPQPDVSTEKSNDDAERSDSQGSLGD
DADSHSTDRGDSERSSATRSDEELSDDELLSTWKSRAGKSAGGK
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaaagctgcaactccagctcaaggagctgggatccaagcttgacgaccctccc
tctaccaaagactctcttatcaagctcttaaagcaaggcacaacattcctttccgagttg
gagcagtcaccgccaaaagctatgttggaggccatgcagcccttacaagctgctatggtt
aaactggaactcctaaagcatcaagatagggaggttaagcttcttgttgccacctgtatc
tgtgagataacaagaattactgcacctgaagctccttacagtgatgatgttctaaaggac
atcttccatttgattgtcagcactttcagcggcttaggtgatataaatagtccatccttt
ggaagaagagttgtcatcttagaaactctagcaagatatagatcatgtgttgtaatgctg
gatcttgagtgtgatgatcttatcaatgaaatgttccggacttttctcagtgttgtcagg
gatgagcatcaagatagtgttctgacatcaatgcaaactatcatggttgttctcatagaa
gagagtgaggatatccgggaggatcttttacatgtcattttgtcggttctaggtcgccat
acgaaagatgttacaatagctggaagggggctcgctatgaaggtgatagaagagtgtgca
ggaaaattggagcccagcataaagcagtttcttgtttcttcaatgtctggagacagcagg
ccaacaacatttgaaattgactaccatgaagtcatttatgatatttaccgttgtgctcct
cagatcctatcaggagttgttccctacatcacaggagagctactgacagatcagctggat
gttcgattaaaagctgtacacttaattggggatctttttgctctgccgggatctgctatc
tctgaagcctttcaaccaattttcttggaatttttgaagagacttactgatagaatagtt
gaggtccgaatgtctgttcttgaacatgtcaagggatgtctgctgtcaaatccatttaga
caagaagcgcctcagatcatctctgcccttcgggaacggctgttggattatgatgaaaat
gtgcgcaaacaagttgttgccgtgctttgtgatgcggcatgtaacaccattacgtccatg
aaggttgaaacgattaagatggtagcagagcgcattcgagataaatctcttcttgttaaa
aaatacacgctggagaggctggctgatatatatagaatctattgcttaaactcttccact
ggctcaattaaaggcgacgaatatgattggatcccagggaggattttgagatgtttttat
gacaaggatttcagatcagacatcgttgagcacattctttgctcatccttgttcccaagt
gaattctcagtcaaggataaagttaaaaactgggttagggtcttcttgagttttgacaag
gttgaggttagagcgcttgagaagctgctggagcagaagcaaaggttgcagcaagagatg
aggaggtatctttctttaaggcagatgcaccaggatggcgatgccactgagatccaaaag
aaagttgtattttgcttccgaatcatgtctcgttgttttactgatcctggaaaggcagaa
gagaactttcagattcttgatcagttaaaagatgctaatgtctggaggatattaacagct
ctccttgacccaaacagtaactctattcaagcttctagttctcgggatgaattgctcaag
atccttggtgagaagcatcggctctatgactttctgggcacactttcattgaagtgctca
tatgtacttttcaacaaggagcatgtatatgaaatccttcaggagactaacatacaaaaa
tctgctggaagcactgatttgattctgtgttgcacacatatacttgtgattcttgcacgt
ttctgtccattgctgcttactggagttgaggaagatttgatacatctgcttgaagatgat
aatgagataattaaagaaggtgtcttgcatgttttggcaaaggctggtggagccatccga
gaaaaattgggagattcttcaaggtcattagaccttatgcttgagaggatttgcttggag
ggaagccggaggcaggccaagtatgctgtacatgcgcttgcatcaataatgaaggatgat
gggctcaagtcactttctgttctatataagagacttgttgatatgctagatgagaagtcg
catttacctgctgtactacaatctcttggatgtattgctcagactgctatgccagtcttt
gagacaagggagaaagagatagagcagttcataaagaaaaacatattggagcgcggtcat
acatcagaaggtaaaaccaaagaaagttgggaagaacggagtgagatctgttcactgaag
atatttggaattaagacactggtcaaaagttatttaccggtgaaggatgcccaccttcgc
ttgggggttgatgacttgttgggaatgctaaaaaacatactttcttttggggaaatctca
atggaaatgaagtcaagttctgttgataaagcccatttaagacttgctgcagcaaaagct
atgcttcgtctatcaaagcactgggaccacaagattcccgtggatatcttttaccttact
ctggggacatcagaggcccgtttccctcaagtaaagaagttatttctcaacaaagttcac
caatacctaaaggatcgttatttggacccaaagtacacttgtgcattcttacttgacttg
cagtttcagcagccagattttgaagagatcaagaacagtttaagtgatgttatccagatc
tatcagcaggggaaggcacgccaactttctgcacaatctgaacctatgaccccagctcct
tatccagaatatattctaccatacttgatccatgctcttgctcatcattcttcatttcca
aacattgacgaatgcaaggatgttaaagcatttgaatctatttataggcaattgcacctt
ttcctctcaatgttggtgcatggagatgaagaggggaaatctgaaggtgatactagtaga
gagaaggaaagcattttaactataaattctattcttcacagcataaaacattcagaagat
gcagtagattcggcaatattaaagaactcatatgctgtctcagaccttggcctgatgatt
gcgaaacggctagttcctaaccaggatgatcttaaggagtctgaagcatcagtatctctt
cctccatctctttacaaacaacttgagaagggtgaagagaaggaccagtctctggttgaa
gtgaagacatggttggctgatgagagcgtcatggttcactttgaatcaatcaagtttgaa
actaatggaacattgaagtcggaaattactgaagacgaggccatgaaagacagtgaaacc
gaaggaaatgaggtgcctttgggaaaaataatggaacggcttaaagctagatctaagatg
cggaaagaggtgaaggatcctgaggtgagaactgaacatgatcttgacatcttgaaagtg
ttgagggagatagattcaaataatgctggcgatgacaataagttggatgcaagcaatggc
catgaatctgcagtcaaaactaaagcaaccaataaacgtcagaaaagaaaaacaggaact
gatatttctgtaccaaaaggtgcaaagcgacaaagatcatcttcttcgggccataaactt
tctgcaaaaatcaaggattctattgaaaatgaggatgatcttctatccatgtcggaagat
aagtcctcagaagaagatgtttatgaacctgaagagtcagacctgttaacatcatccatc
aggatgaaaacaagcttctcgcctaaacaaaagcgtaaatctactgataagacttgtggt
gacacccatgaagttggagtggatagtcgtggactgaaaaagtctaaacaaaacacagaa
gcagttaatacacatgtcgaaagtaataacatgtcaggatctcacaagcaacagaagaag
aaaagtatagctggactggccaagtgcacgtcaaagggtgatacagctcccactgtggac
ttgattggttgcagaataaaagtttggtggcccatggataagaagttctatgaaggtgtt
attaagtcatttgacactcaaaagaacaaacacgttgttctatatgatgatggtgatgta
gaagtcctccgattggaaaaagagtgttgggagcttgttggtggtgggcagaagcctgtg
aagggttcaaattcgaaaaagggttcaaattccaaaatggtttcacgccacgagaaagta
aatggagagaggaaaaataaagctcttgctgcctccaagcaaaagaaagagacagataac
atgcctccattatcacaagtacgaggcaagagaactccaaggaagaacttgaagtatgga
caaaaaggcccatcaaaatcttctttcagcagaggaaggctgcttttaggaaagccgttg
gcaacctcaaagtccaaggaaaacaatttaagctcaggcaattcagaaggtgagcagaaa
gagagtatgcatgggagtttgtctgaacacgaactgtctgacaaggatgacagatcgtac
tctgatgggaaaccaggggctgatgatgatgatgataggtcaagcggtatggaagagtcc
gtaaaagaagaaagtcccttggaaaataaaaaatttgaggatgaacctggcacccctctg
gattcccgtggattggacgaggagatctcttcttcacatgagaaaccacagccagatgta
tcgacggagaagtcaaatgatgatgctgaaagatcagattctcaggggagtttaggagat
gatgcagacagtcattcaactgatcgaggtgactctgaaaggagttcagctacaagatct
gatgaagaactatctgatgatgagctactgagcacgtggaaaagtcgagcagggaaatcg
gctggagggaagtaa
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integrated database retrieval system
