Nicotiana sylvestris (wood tobacco): 104232674
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Entry
104232674 CDS
T05026
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 3 homolog
KO
K11642
chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104232674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsy03036
]
104232674
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104232674
Chromatin remodeling factors
NuRD complex
104232674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chromo
Helicase_C
SNF2-rel_dom
PHD
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
104232674
NCBI-ProteinID:
XP_009784236
UniProt:
A0A1U7X3H0
LinkDB
All DBs
Position
Unknown
AA seq
1332 aa
AA seq
DB search
DKKDVEPFRSELRVDRTANCKGSKQGDKTEGESKDCLICKQEGNLLSCAGQGCKRSFHLS
CVDPPLSYFPPGPWHCYWCVRRKLKLGVHSVSEGVDSLLDVRECNFGNEVMQNREYLVKY
KGLAHVHNHWITERQLLLEAPAALRRFKKKNKSVSWKTEWSLPHRLLDKRLIAVTDHKNT
HVHGIDENDADCHYEWLVKWTGLGYSHATWEVENASFLRSLEAVKLMTNYEIRHQQAKKE
LHPLTEDEKRKADFQELPRPLFGSVPQVHNHLTYINTLRKYWQKGQSAVVIDDQERILKV
VLFLLSLPKDIGLPFLIITTSAELPLWEAEFLHWASSANIVVYKGNKDIRAIIRTLEFHN
KQGAIMFQVLLSPYDAIVEDLEMLQPISWGAVIIDQCQGSAMSILLSQIKVLVSDMRLLI
FRQLEGRCDRGFNHCNVLSLLDPEYDKANNDLSDADPNIDLTEFKERLKSFVAYECNSST
SKFIEYWVPVKLSNEQIEQYCNCLSSNSALLCSRWRNNSPNSLHNILVSTRKCCDHPYLE
DRSLRDIVLEGIPVDQHFDAEIKLSGKLEFLYKILREIKQQGQRVLILFRSLGGSGVISI
GDILDDFIHRKFGEDSYTRISGEFSRKLKQATLNKFNNEGSGKFACLMETRVCAPSIKLS
RIDTIILFNSDWDPTNDLRSLQKIAIYSKLEQIKVLRLYSYFTVEEKALILAKQGMTIDS
NIENIKQFHELLTWGASYLFNMLDCFHVQSSQSKRSSDIAALDDVFAELLRLMSSNSENS
DYNSCSKILKVQQNGGTYPRNISLLGEVEMQLMDDSSFVRGMTNELPNVFWISLLHGTVR
RWKHLPRLSQGIRTVRPRGDLCQPSEREQVSEKKGRKEGNKVHLTPEPKLRTKRKLHVQG
KRHKLGMSHLSGGNKYKSRRLVSNPSPQCDIDRQGRAAIDKVQSQVGLTMTDQHRKESIS
KKSNQPPDSNLPASTGRDQAHAFVPTDNHQSHRNCIDSSSHQVLDFVDLQPEELNLPIDS
SIQRSAGNLPLQQHTSIGAGNDASMRSRNSQEYRCRPDASPDASELLQSPCSYALQMEME
RILKEREQTTKLHENLNLLLISEYEKELDAIKKKYDLLFEVADTELVQKRKDLDTLYNKV
HMNKLLAEAMIQIQNTAWSLEMAEGTGQSSPSRPSSVPAVISASTQPASQSSDVLKYPSL
FSEHVNLEQRAADYQISSQNFSMAVIPSQNAELPMVTESAAVPPTSARVTLQTTTSANLP
TSGSPMTPTRNLQPVILTPVLSTSVPSQPSIQTFSYAAIPGTGCVLRAQAPHMRHFRPPP
TMNSWNSSLLQW
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
gacaaaaaggacgttgagccttttagatcagagcttagagttgacaggactgcgaattgc
aagggctccaaacagggtgataagactgaaggtgaatctaaggactgtttaatctgtaag
caggagggaaatctattatcctgtgctggacaaggatgcaaaaggagcttccatctttct
tgtgttgacccccctctgtcctattttccacctggaccatggcactgttattggtgtgtt
agaaggaagttgaaactaggtgttcattctgtgtctgaaggagtagattcccttttggat
gtcagagagtgtaattttggtaatgaagttatgcaaaatcgggagtatttagtaaagtac
aaaggtcttgctcatgttcataatcactggattacagagaggcagctgcttcttgaggct
ccagcagcccttagaagattcaagaaaaaaaacaagagtgtaagttggaaaactgagtgg
agtcttccccatcgtttgctagacaaaaggttgatagcagttacagatcacaagaacact
cacgtgcatgggattgatgaaaatgatgcagattgccattatgagtggcttgtgaaatgg
acaggtctgggctacagtcatgccacgtgggaagtggagaatgcttcatttctaaggtcg
cttgaggcggtcaaactcatgactaattatgaaatccgacatcagcaggctaagaaagag
ttgcatcctttgacggaagatgagaaaaggaaagccgactttcaagaactgccgagacct
ctatttggaagcgtgcctcaggtccataatcatcttacttatatcaacactcttcgtaaa
tattggcagaagggtcagagtgctgtcgtcattgatgaccaggagcggattttgaaggtg
gtcttatttctattatccttgcccaaggatattggtttgccttttctcataatcacaact
tctgctgaacttcctctttgggaagctgagttcttacattgggcttcttctgctaacatt
gttgtgtacaaaggtaataaagatatacgagccattataaggacacttgagtttcacaac
aaacaaggtgccataatgtttcaggttcttctgtcaccttatgacgctattgttgaggat
cttgaaatgcttcagccaataagctggggagcagtaattatagaccagtgccagggttct
gccatgtcaatacttctctcacaaattaaagtgcttgtttctgatatgagattgcttatt
ttccgtcaactagagggtagatgtgatagagggttcaatcactgtaatgttctctcttta
cttgatcctgagtatgacaaggccaacaatgatctgtcggacgctgatcccaacatagac
ctaactgaattcaaggaaaggttaaagagctttgttgcatatgagtgcaactcctccaca
tcgaagttcattgagtactgggttccagtcaaactctccaatgaacaaattgagcaatat
tgcaattgcctctcttcgaattcagctttactttgctcacgttggaggaataactcacca
aattccctccacaacatacttgtatctaccaggaagtgttgtgatcacccttacctcgaa
gaccggtctctgcgagacatagttctagaaggcattcctgtcgatcagcactttgatgct
gaaattaaactaagtggaaaattggaattcctctataagattcttcgtgagatcaaacag
caaggacaaagagtgctcattctttttcggtctcttggtggatcgggggttatttccatc
ggggacattttggatgattttattcatcgaaaatttggtgaggattcttatacacgcatt
agtggggaattcagtcgtaaattgaagcaagctaccttgaacaagttcaacaatgaggga
agtgggaaatttgcttgtttgatggagactcgtgtttgtgctcccagcatcaagctttcg
agaatagatacaattattttgtttaacagtgactgggacccaactaatgatttaagatcc
ctgcagaagattgcaatttattcaaaattggagcaaataaaggtactccgtctatattca
tattttactgttgaagagaaagcactcattcttgcaaagcaaggtatgacaattgacagc
aacatagagaatataaaacaattccatgaactgctaacttggggtgcctcttatcttttc
aatatgcttgattgtttccatgtacaatcttcacaatcaaaaagatcgtctgacattgct
gctttagatgatgtctttgctgaattgttacgcctgatgtctagtaacagtgagaacagt
gattataacagctgttcaaagatattgaaagtgcagcagaatggagggacttatccaaga
aatatatctctacttggtgaagtggaaatgcaactgatggatgattcttcttttgtgaga
ggaatgacgaatgaacttcccaatgttttctggataagtctgttacatggaacggttcgt
aggtggaaacacttgcctagactatcacaagggattaggacagttagaccccggggtgat
ttgtgtcagccatccgaaagggaacaagtttctgaaaagaaaggcaggaaagagggcaat
aaagttcatcttactccagaacccaagttaaggacgaaaaggaaattgcatgtccaggga
aagagacacaaacttgggatgtctcatctttctggtggtaacaagtataaaagcaggcgt
cttgtgagtaatcccagtccgcagtgcgatattgacaggcaaggtagagcagctattgac
aaggttcagtcccaagttggcttaaccatgactgatcagcatcgaaaagaaagtatttcc
aagaaatcaaatcagccgccagattccaatttgcccgcctctactggccgtgatcaagct
catgcatttgtgcccactgacaatcaccagagccataggaattgtattgattcttccagt
caccaggttttagatttcgtggaccttcagccagaggagttgaatttgccaatagactct
tctattcagcggtctgcaggaaatttgccactgcaacagcatacgagtataggtgcagga
aacgatgcgagtatgagaagcagaaacagccaggaatatcgatgtcgtcctgatgcctct
ccagacgcatctgagctgcttcaatccccttgttcatacgcacttcaaatggagatggag
aggatactaaaggagagagaacaaactacaaaattgcatgaaaatctgaatttgctcctg
atatctgaatatgaaaaagagctagatgcaataaagaagaagtacgatttgctgtttgag
gttgctgacacggaattagttcaaaagcgcaaagatcttgatacactctacaacaaagtg
catatgaataagttactagctgaagccatgatccagatacaaaatactgcgtggtcacta
gagatggcagaaggaactggacaatcatcaccaagccgacctagtagtgtcccagcagtg
atttctgcatcaacacaaccagcaagtcaatcatcagatgttctgaagtatccaagttta
ttttctgaacatgtcaacttagagcaacgagctgcggactatcaaatatcctctcagaat
ttttcaatggctgtcattccatctcaaaatgctgaattgcctatggtgacagagtcagct
gcagttccgccaacaagtgcaagggtcaccctgcaaacgacaacctctgctaatctgccg
acaagtggttcacctatgaccccaacacgaaacttgcagcctgtcatcctcacaccagtt
ttatcgactagtgttccaagtcaaccctcgatccaaacttttagttatgcggcgatccct
ggaacaggctgtgtactaagggcacaagctcctcatatgagacattttagaccaccgcca
acaatgaattcttggaattccagcctgttgcagtggtga
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