KEGG   Nicotiana sylvestris (wood tobacco): 104234935
Entry
104234935         CDS       T05026                                 
Name
(RefSeq) HBS1-like protein
  KO
K14416  elongation factor 1 alpha-like protein
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104234935
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104234935
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104234935
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 Mg_chelatase SMC_N G-alpha
Other DBs
NCBI-GeneID: 104234935
NCBI-ProteinID: XP_009786888
UniProt: A0A1U7X7S4
LinkDB
Position
Unknown
AA seq 470 aa
MSISSKPRSVDTGKSDSATSSSKNKPQKSVQPPRIKDNFNQLNLAIVGHVDSGKSTLSGR
LLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESAEERERGITMTVGVAYFNTKCYR
VVLLDSPGHRDFVPNMISGATQADAAILVIDASVGAFEAGIDATGGQTREHAQLIKSFGV
DQIIIAVNKMDAVGYSKERFNAIKKQLGTFLRACKFKDSSVAWIPVSAMENQNLVTGPAE
AQLSSWFQGPCLLDAIDSLQLPQRDYSKPFLLPICDVVRAQSQGQVSICGKLERGALQTG
NKVLVMPSREMATVRSLECDSQVCNSAKAGDSVTINLQGIDANHVMEGGVLCHPEFPVPV
ANHLELKVLILDNSIPILIGSQLEFLVHHAKEAARVVRILSLLDPKTGKETKKSPRCLLA
KQNAIIEVVLQGMVCIDEHSNCKALGRVSLRSSGRTVALGLVTRMIGKKE
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtctatatcatcaaagcctcgcagtgtggatactggaaagagtgacagtgcaacatca
agctcaaagaataagcctcagaaaagtgtacagcctcctcgaataaaagataacttcaac
cagctaaatcttgcaattgttggccatgtggattctgggaagtcaacgctgtcaggaagg
ttgctacatcttttggggcggatatcccagaaagaaatgcacaaatatgaaaaagaggcc
aagctacaaggaaaagggtcgtttgcttacgcttgggcattggatgagagtgctgaagaa
agagagaggggaataactatgacagtgggcgttgcctacttcaacacaaaatgttaccgt
gttgttctgcttgattccccaggtcacagggactttgtcccaaatatgatatcaggggca
acacaagcagatgcagcaattcttgtaattgatgcttcagtaggtgcatttgaagcaggt
attgatgctactggaggtcagacgagggagcatgcacaacttatcaaaagctttggggtg
gatcagattataattgctgttaacaaaatggacgcagtgggatactccaaagaacgattt
aatgcaattaagaaacaattaggcacatttctccgtgcttgtaagtttaaagattcttca
gtagcatggattcccgtaagtgccatggaaaaccaaaatttggtgacaggtccagcagaa
gcgcagttgtcatcctggttccaaggtccttgcctattggatgcaatagactctctccaa
cttcctcaaagagattactcgaagccattcttattgccgatttgtgatgttgtaagggca
cagtctcagggacaagtgtcaatatgcggtaagttggagaggggagctcttcaaactggg
aataaggttttagttatgccatcgagagaaatggcaacagtgcgttctttggaatgtgat
tctcaggtttgtaacagtgcaaaagcaggagacagtgtcactatcaacctacaaggtatt
gatgcaaatcacgtgatggaggggggtgtcttgtgccaccctgaatttcctgttccagtt
gcaaatcatttggaactgaaggttctcatcctggacaattccattccaattttaattggc
tctcagttggaatttcttgtacaccatgctaaggaggctgcaagagttgtgaggattttg
tcattgcttgatccaaagaccggaaaggagaccaagaaatcacctcgatgtcttctggca
aagcagaatgctatcattgaggtcgttttgcaagggatggtttgcatcgacgagcattct
aattgtaaagctctcggaagggtgtccctcaggtcatctggaagaaccgttgctcttggt
ctggtgactagaatgatagggaagaaggaataa

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