Nicotiana sylvestris (wood tobacco): 104236485
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Entry
104236485 CDS
T05026
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104236485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104236485
Membrane trafficking [BR:
nsy04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
104236485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
LepB_N
Motif
Other DBs
NCBI-GeneID:
104236485
NCBI-ProteinID:
XP_009788707
UniProt:
A0A1U7X9B8
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MSRKLSDNGIDERDEEEEEDSEEEEEKEEEYEPRLKYQRMGGSVQSLLSSDAATCIAVAE
RMIALGTYGGAVHILDFLGNQVKEFAAHTAAVNDLCFDAEAEYIGSCSDDGSIVINSLFT
NERMKFEYHRPMKAVALDPDYARKSSRRFVTGGLAGNLYLNAKKWMGYRDQVLHSGEGPI
HAVKWRTSLIAWANDAGVKVYDAANDQRITFIERPRGSPRPELLVPHIVWQDDTVLVIGW
GTSVKIASIRTNQNKGVNGTYKYITMSSLNQVDIVASFQTSYFISGIAPFGDSLVILAYI
PAEEDGEKNFSSTIPSRQGNAQRPEVRVVAWNNDELATDALPVHGFEHYKAKDYSLAHAP
FSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDTEDHINWLLQHGWHEKALEAVEANQG
RSELHEEVGSRYLDHLIVERKYGEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYI
PTENPRLRDTAYEVALVALATNPAFHKDLLSTVKSWTPSIYSSSPVISAIESQLNTSSMT
DYIKEALAELYVIDGQHEKAFAIYADLMKPDLFDFIEKHNLHDAVREKVVQLMMVDSKRA
IPLLIQHMDLIHPPEVVSQLMAARNKCDHRYLLHLYLHSLFEVNPHAGRDYHDMQVELYA
DYDPKMMLPFLRSSQHYTLEKAYDICVKRDLLKEQVFILGRMGNAKQALAVIINKLGDIE
EAIEFVSMQHDDELWEELIKQSLNKPEMVGVLLEHTVGNLDPLYIVNMLPNGLEIPRLRD
RLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYKEAKRAICLSDDVDEARSRKSEQKA
SHLGERVMSMKSTEVKSKTRGGGRCCICFDPFSLQNVSIIAFFCCHAYHTTCLMESTISV
GGKKESGVASKGTGSYYEFDNGIDEEEEEDDDDDDGDASSGAPRMRCILCTTAAG
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggaagctatcagataacggaatcgacgagagggatgaagaagaagaagaagat
tccgaagaagaggaggagaaagaagaagaatatgaaccgagacttaagtatcagaggatg
ggaggcagtgtacaatcgcttctctcaagcgatgctgccacgtgtattgccgtcgccgaa
cgaatgattgctcttggtacttacggtggagccgttcacattctagatttccttggcaat
caggttaaagagtttgctgctcatactgctgcagtcaacgatctttgctttgacgcagaa
gcggaatacattggaagctgttccgatgatggatctatcgtaataaatagtcttttcact
aatgagaggatgaaatttgagtatcatcgtccaatgaaggccgttgctttagacccagat
tatgcaagaaaatcttccagaagatttgtgactggtggtttagctggtaacttgtatctt
aatgctaagaagtggatgggctaccgggaccaggttctgcactctggtgaaggtccaatt
catgcagtgaagtggcggactagtctcattgcctgggcgaatgatgcaggagttaaagtt
tatgatgctgccaatgatcagcgcataactttcattgaaagacctcgtggaagtccacgc
cctgaacttctggtccctcacatagtttggcaggatgacactgttttggtcattggatgg
ggaacctctgtgaaaattgcatcgataagaacaaaccaaaacaaaggcgtgaatgggaca
tacaagtatataaccatgtctagtctgaatcaggtggacattgtggcatcctttcaaacc
agctatttcatttcaggaattgctccttttggtgattccttggttattctagcttatatt
cctgccgaagaagatggagagaagaacttcagcagcactattccctcaagacagggaaat
gctcaaagaccagaagtgcgcgttgtggcatggaataatgatgagctcgctaccgatgct
ctccctgtacatggctttgagcattacaaggcgaaagactattcacttgcacatgctcca
ttttcaggtagcagctatgcagggggtcagtgggctgctggtgatgaacccttatactac
attgtgtccccaaaagatgtggtcattgcgaagccaagggatacagaagatcatattaat
tggcttctccagcatggatggcatgagaaagctttagaagcagttgaggccaatcagggt
aggagtgagctccatgaagaggtgggttcgagataccttgatcatctgattgtggaaagg
aagtacggagaagcggcatcattatgcccaaaattgttgcgaggatcagcttctgcgtgg
gaaagatgggtttttcattttgcacatctgcgacaactccctgtgttggtcccatacatc
ccaacagaaaatccaagattgcgtgatacagcttatgaggtagctcttgttgctctggca
acaaatccagctttccacaaggatctcttatcaactgtcaaatcctggacacctagcatt
tattcttcatcacctgttatctcagctatagaatctcagcttaatacttcatctatgact
gattacatcaaagaggcattagcagaattatatgtgattgatgggcaacatgaaaaagct
tttgctatttatgcggatcttatgaagccggatctgttcgacttcattgaaaagcataat
ttgcatgatgctgtacgtgaaaaggttgtccaacttatgatggttgacagcaagcgtgcc
atacctttgttgatccagcatatggacctaatacatccacccgaagtagtgtcacaactt
atggctgcaaggaataagtgtgaccatcgctaccttttgcatctgtaccttcattcacta
tttgaggtgaatcctcatgctggacgggattaccatgacatgcaggtcgagctttatgct
gactatgatccaaagatgatgcttccctttctcagaagtagccagcattatacactcgag
aaggcttatgatatctgtgtgaagagagatttattaaaggagcaagttttcatccttgga
agaatggggaatgcaaagcaagcccttgcagttatcataaataaattaggagatatagaa
gaggccatagaatttgtaagcatgcaacatgatgatgaactctgggaagagctgattaaa
caaagtcttaataagcctgaaatggttggagtattattagagcatactgtagggaatctt
gatcccctttacattgtaaatatgttgcctaatggcttggaaatacctcgtctgagggat
cgtctagtcaaaattgtcactgactacagaacagaaacttctcttagacatggatgtaat
gacatactcaaggctgattgcgtcaacctgctagtcaaatactacaaggaagcaaagcgt
gcgatatgtttgagcgatgacgttgatgaagcacgttcccgcaagagtgagcagaaggct
tcacatttaggagagagagtcatgagtatgaaatcaacggaggtcaaatcaaaaaccaga
gggggcggaaggtgttgcatatgttttgatccgttttctctacagaatgtatcaattatt
gccttcttttgttgtcatgcctaccatacaacgtgtcttatggaatccaccatttccgtg
ggcggtaaaaaagagtccggggttgcttccaaggggactgggtcatattatgaatttgat
aatggtattgatgaagaagaagaagaagatgatgatgacgatgatggggatgcttcttca
ggtgcccctcggatgcgttgtattttatgtactacggcagcaggttga
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