KEGG   Nicotiana sylvestris (wood tobacco): 104243087
Entry
104243087         CDS       T05026                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2 isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104243087
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    104243087
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 zf-C3HC4_4 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 GIP1_N zf-Di19
Other DBs
NCBI-GeneID: 104243087
NCBI-ProteinID: XP_009796533
UniProt: A0A1U7Y078
LinkDB
Position
Unknown
AA seq 1017 aa
MGNKIAEELVSTVRSIVGDEYTEMDIIRALHMAKNDPTAAINIIFDTPSFKKLEIVNVIS
NSSSNNTSEIQKLEPSTVSSNEGLNINESRIESECDRGSEWWYVGCGEVAGMSTCKGRIL
KAGEEVQFTFPVEKKKLSSASPAGKFGRGRQAAAACSEIVRFSTKACGEMGRIPNEWARC
ILPLVRDKKIRIEGCCKSAPNILAIMDSVLLSVRVYINSSMFHKSHQTSLKARSTDDTVV
HPLPTLFHLLGLTPFKKAEFTPADLYTRKRPLSEQDSSGGPASVLHANLSKSSSSADGDK
VENDETISDTDLDYIVGSADNSEIQEMEPPSTLQCELRPYQKQALHWMTQLERGRTTDEA
ATTLHPCWDAYRLKDERELVVYLNAFSGDATTEFPSTLEMARGGILADSMGLGKTIMTIA
LLLSHSERGGSSGSQPTSQLSGENGEASNILGQSTTFAKKSAKFSSLDKLLKHKPTLISG
GNLIICPMTLLGQWKAEIEAHAQPGALSLYVYYGQTRSKDTKVLARSDVVLTTYGVLASE
FSTENAEDSGGLFSIRWFRVVLDEAHTIKSSKSQISNAAAALIADRRWCLTGTPIQNNLE
DIYSLLRFLRIEPWGSWAWWNKLVQKPFEEGDERGLKLVQQILRSIMLRRTKSSTDREGR
PILVLPPADIQVTYCELTEVERDFYDALYKRSKVKFDQFVEQGRVLHNYASILELLLRLR
QCCDHPFLVMSRGDTQEFSDLNKLAKRFLKGGKETGEGKDVPSRAYIQEVVEELRKGEQG
ECPICLEAFEDAVLTPCAHRLCRECLLASWRSSTSGLCPVCRNTVSKQELITAPTDSRFQ
IDVEKNWVESSKVSALLGELERLRSVGSKSIVFSQWTAFLDLLQIPLSRSNIPFVRLDGT
LNQQQREKVIKKFSEEDGILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAVMRV
HRIGQTQQVMIKRFIVKGSVEERMEAVQARKQRMISGALTDQEVRTARIEELKMLFA
NT seq 3054 nt   +upstreamnt  +downstreamnt
atggggaacaagatcgcagaggagctcgtttctacggtacggtccattgttggcgatgaa
tatacagagatggacataattagagcacttcacatggccaaaaacgaccccacagctgca
attaatatcatttttgacaccccaagtttcaagaaactcgaaattgtaaatgtaatttca
aattcaagcagtaataatactagtgagatccaaaaacttgagcctagtacagtttcttca
aatgagggattaaatattaatgagagtagaattgagagtgagtgtgacagggggagtgag
tggtggtatgtggggtgtggtgaggtggcgggtatgtcaacatgtaaaggaaggatattg
aaggctggcgaggaagttcaatttacgttccctgtggagaagaagaaattgagttcagct
tcaccagctgggaagtttggacgagggcgtcaagcggctgctgcttgttctgaaattgta
aggttttctaccaaggcttgtggagagatggggcgtattccaaatgaatgggctcgatgt
attctgccgttggtgagggataagaagattagaattgaagggtgttgcaaatcagctcct
aatatattggcgattatggactctgttcttttgtccgtcagagtgtatattaatagctcc
atgttccataaaagccatcagacatcactaaaggctagatctacagatgatacagttgtt
cacccccttccaactttgttccatttgctcggacttactccttttaagaaggcagaattc
actccagctgatttatacacgaggaagcggcctttgagcgaacaggacagctctggtggt
cctgcctcagtattgcacgcgaacttatccaaaagctcttcatctgcagatggagataaa
gttgagaatgatgagacaatttctgatactgatcttgattatattgttggttcagctgat
aactcggagatacaggaaatggaaccaccaagtacactccagtgcgaactgcgaccctat
cagaagcaggcacttcattggatgacacaactggagaggggaagaaccacggatgaagcg
gcaacaactctgcatccatgttgggatgcttaccgtctgaaagacgagagggagcttgtt
gtttacttgaatgcattttcgggtgatgcgaccactgaattcccgagtacccttgaaatg
gctagaggaggaattttggcagattcaatggggttagggaagactataatgactatagct
ctcctcctcagtcattctgaaagaggtggatcatcagggagccaacctacaagccagctg
tctggtgaaaatggtgaagctagtaatattttaggtcaatctacaacttttgcaaagaaa
tcagcaaaattctctagtcttgataagctcctgaaacataagcccacacttatctctggt
gggaatctgataatatgtccaatgacactactaggtcaatggaaggcagagattgaagcc
catgcacaacctggtgctctatctctttatgtttactatgggcagacaagatcaaaggat
acaaaagtgcttgctcgaagtgatgtcgtgctgacaacatatggagtgttggcctccgaa
ttttctacagagaatgctgaggacagtgggggacttttctctattagatggtttagagtg
gtgcttgatgaggcacatactatcaaatcttctaaaagccaaatctccaatgctgctgct
gctcttattgctgaccgtcggtggtgtcttactggtacccctatccagaacaatctggag
gatatttacagtcttcttagatttttgaggatcgaaccatggggaagctgggcatggtgg
aacaagcttgttcagaaaccttttgaggagggagatgagagggggctaaagttggttcaa
caaattttaagatcgatcatgttgagaagaacaaagtctagtacagacagggaaggcaga
ccaattttagttctaccaccagcagatattcaagtgacatattgtgaactaacagaagta
gagcgcgacttctatgatgcattgtataaaagatccaaggtgaagtttgatcagtttgtt
gagcaagggcgagttctccacaactatgcttctatattggagttgcttttgcgacttcgt
caatgttgtgaccacccgtttcttgtaatgagtcgaggtgatacccaagaattctccgat
ctaaataagcttgctaaacgtttccttaagggtggtaaggagactggagaaggcaaagat
gttccttcacgtgcttacattcaggaggttgtggaagagttgcggaagggagaacaggga
gaatgtcctatttgtcttgaagcttttgaagatgcagtcttgactccatgtgctcatagg
ttatgtcgagagtgtctcttggcaagctggcgaagttctacttccggcctttgtcctgtt
tgtagaaacactgtcagtaagcaggagcttataacggccccgacagatagccgctttcag
attgatgttgagaagaattgggtggagtcatcaaaagtatcagccttgttgggtgaacta
gaacgtcttcgttccgttggctccaaaagcattgtttttagtcagtggactgccttctta
gatttattgcagattcctctttctcgtagtaatattccatttgttcgccttgatgggacg
ttaaaccagcaacaacgtgagaaagtaataaagaagttctcagaagaggatggcatattg
gtgttgctaatgtcattgaaggctggtggtgttgggataaacctgacggctgcatctaat
gcttttgtcatggatccgtggtggaatccagctgttgaggaacaagcggtcatgcgtgtt
catcgtattggacaaactcagcaagtaatgattaaacgattcattgtgaagggttcagtt
gaggaaagaatggaggcagtacaagctaggaagcaacggatgatttctggtgctttgacg
gaccaagaagttcggactgcaagaattgaggaacttaagatgctttttgcatag

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