Nicotiana sylvestris (wood tobacco): 104246383
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Entry
104246383 CDS
T05026
Name
(RefSeq) DNA repair protein rhp26
KO
K10841
DNA excision repair protein ERCC-6
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104246383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsy03036
]
104246383
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104246383
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104246383
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
104246383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
104246383
NCBI-ProteinID:
XP_009800493
UniProt:
A0A1U7YBJ3
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MEEEEEDKILLSSLGVTSANPEDIEHDILEKATRHPGESNEAMGSAEEEIVERKKGNEEG
QDKKLDLYNKLRAVEVEIDAIKSGFEHLERFRRHEEEVPDTDGSSEAKQTESEQSVIQAP
LDDSNLQHALADDRLRSLLKTKAQLKKELSDFTDDTSSDALIRDLVKDQPEFKRKVKEVQ
KSSNKKSKRRKTTLLDDDDDFDAVLTAASSGFVETERDALVRKGMLTPFHQLKGFERRVQ
DSESFGRQSTAADINSNDNDLASTSIAKAVQSISQAAQARPTTKLLDSASLPKLEAPTHP
FQRLRKPLKIPQSLETTPEKNGDGTRKKKRPLPSKKWRKLASREQRQNEGSDVNTSSHED
NQGDIEDVEPPFVALEGGFRIPEAIFNSLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGK
TVQVLSFLGSLHFSNMYKPSIIICPVTLLRQWKREAKKWYPSFHVEILHDSAHDLSSKKK
QADSESDYESEDLLDSETEGNTSSRTSKKWDPVIARVVRSNSGLLITTYEQLRILGEKLL
DIEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGK
LGVLPVFEAEFAVPISVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTK
KTEHVLFCSLTPEQRSVYRAFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLEREHSC
RDPDYGNPERSGKMKVVAEVLKVWKEQGHRVLLFSQTQQMLDIFERFLVTCEYNYRRMDG
VTPVKQRMALIDEFNNTDDIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARER
AWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFTL
NDDENGGSTETSSIFSQVSEDVNIVGVPGNQDKQSFKATAEKDDDSNIGGGNNSKTKGKA
GDGNSNGELDGEASILRSLFDAHGIHSAMNHDAIMNAHDEEKLKLEEQASQVAQRAAEAL
RQSRMLRSRENVAVPTWTGKSGAAGGPSSVKRKFGSTVNPQLTSKSSEESLNDSASRANA
FAAGASAGKALSSAELLARIRGNQEKAVSDGLVHQFGMSASTSNGRAGSLNSGHRSASSS
YVVQPEVLVRQICTFIQQRGGKTNSASIVDHFRDRVPSKDLPLFKNLLKEIATLDKNPSG
SFWVLKPEYQDQ
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggaggaagataagattttactcagcagtttgggtgtgacctctgcaaat
cctgaagatattgagcatgacatcttggaaaaggcaacaaggcaccctggggagagcaat
gaagctatggggagtgctgaagaagagatagtggaaagaaagaaaggcaacgaagaagga
caggataagaaattagatttgtataataaactgagagcagtagaagtagaaatagatgcg
attaagagtggttttgaacacttggagcgcttcagaagacatgaggaggaagtcccagat
actgatggtagcagcgaggcaaagcagacagagagtgagcaaagcgttattcaggcacct
ctggacgattcaaaccttcaacatgctttagctgatgatcgtctaagaagtctcctcaag
acgaaggctcaacttaagaaagaactttcggattttactgatgatacttcgtctgatgca
ttgatacgagatcttgttaaggatcaacctgaattcaaaagaaaggtgaaggaagttcag
aaatcaagcaacaagaagagcaaacgacggaagacgacattgttggatgatgatgatgat
tttgatgcagtgttaactgcagcatcttctggatttgttgaaacagaaagagatgcactg
gtaaggaaaggaatgttaacccccttccaccagctcaaaggctttgaacgccgggttcaa
gattcggagtcttttggcagacaaagtactgcagctgatataaacagtaatgacaatgac
ctggcttccaccagtatagccaaggctgtccagtcaatttcacaggcagctcaagctcgt
ccaaccaccaagttgcttgattctgcttcattaccaaaacttgaggcaccaacccaccct
ttccaaagactaaggaaaccccttaaaatccctcaatcattagagactacaccagagaag
aatggagatggtactagaaagaagaaaagaccattacctagcaagaagtggagaaagttg
gcatctcgggagcaaagacagaacgaaggatcagatgtcaatacctccagtcatgaggac
aaccaaggggatattgaagatgtagaacctccttttgtggcacttgaaggtggattcaga
atcccggaagctatctttaacagtctttttgactatcagaaggttggtgtacagtggctg
tgggaacttcactgtcaaagagctggtgggataattggagatgagatgggtcttggtaaa
accgtacaggttttatcttttctcggatcactgcattttagcaatatgtataagccaagc
attataatttgtccagtcactcttttgaggcaatggaagagggaagctaaaaaatggtat
cccagcttccacgtggagatattacatgattcagctcatgatctatcaagtaaaaagaag
caagcagattctgaaagtgactatgaaagcgaagatctgcttgacagtgagactgaagga
aacacatcttcgaggacttccaaaaaatgggatcctgtgatagctcgtgttgtaagatca
aattctggactattgatcactacttatgagcaactccgtatattaggagagaaattactt
gacatcgaatggggttatgcagtgttagatgaaggacatcgaattcggaatccaaatgct
gaagttactcttgtatgcaagcagctccagactgttcaccgtatcataatgacaggggcc
ccaattcaaaacaagctgagtgaactgtggtcattgtttgattttgtcttccctggaaag
ttgggagttctacctgtgtttgaggctgaatttgctgttcccatatctgttggggggtat
gctaatgcaacacccttgcaagtttccacagcttacagatgcgctgtggtgttgcgtgac
ttaatcatgccttacctcctccggcggatgaaagctgatgtcaacgctcatctcactaag
aaaactgagcatgtcctcttctgcagcctcacaccagagcagcgatctgtttaccgagct
tttcttgctagctctgaggttgaacagatctttgatgggaacaggaattctctgtatgga
attgatgtaatgcggaaaatttgcaaccatcccgatcttctcgagagagaacactcctgt
agagatccagactatggaaatcctgaacgcagtgggaaaatgaaagttgttgcagaagtg
cttaaggtatggaaagaacaggggcaccgtgttctccttttttctcaaactcaacagatg
cttgatatttttgagagatttctcgttacttgtgagtacaattataggcgaatggatggt
gtcactcctgtaaagcagaggatggctttgatagatgaatttaacaatacagatgatatt
ttcatcttcatcttgacaacaaaagttggtggtctggggacaaacttgacaggagctaac
agagtaatcatttttgatcctgactggaacccatcaactgacatgcaggcccgggagcgt
gcttggcgaattggtcaaaaaaaggatgttacagtgtatcgattgattacccgaggaacc
atagaggagaaggtgtatcatcgacagatttacaagcactttcttaccaacaaaatattg
aagaacccacagcaaagaagatttttcaaagcaagagatatgaaggacctatttacatta
aatgatgatgaaaatgggggatctacagaaacatctagcattttcagccaggtatctgaa
gatgtgaacattgttggggtcccaggtaatcaagacaaacaatcttttaaagcaacggca
gaaaaggatgatgattccaatattggcgggggcaataactcaaaaaccaagggaaaagcg
ggagatggtaacagcaatggagagttagatggagaagcaagcatcctgcggagtcttttt
gatgctcatgggatccatagtgcgatgaatcatgatgctatcatgaatgctcatgatgaa
gagaagttgaagctagaggagcaggcatcccaagtagctcagagagctgcagaagcactg
cgacagtcaagaatgcttcgaagtcgagaaaatgtagcagtgccaacttggactggcaaa
tcaggagctgctggggggccatcatctgttaaaaggaaatttggttctactgttaatcct
caattaaccagtaagtcatctgaagaatcactgaatgactctgctagtagggcaaatgct
tttgctgctggggcatctgctggaaaagcattatcttcagcggagttattggctaggatt
agggggaaccaagagaaagccgttagtgatggacttgtgcatcagtttggtatgtcggct
tcaacctcaaacggcagagcaggttctctaaatagtgggcatcggagtgcatctagcagc
tacgtagttcagccagaggtgttggttcgccagatctgcacgtttatacaacagagaggt
gggaaaaccaattcagctagcattgtagatcatttcagggaccgggtaccatcaaaggat
ctgccactgttcaagaatcttttgaaggaaatagcgactctggataaaaaccctagtgga
tctttttgggtgttaaagcctgaatatcaggatcagtag
DBGET
integrated database retrieval system