KEGG   Nicotiana sylvestris (wood tobacco): 104246383
Entry
104246383         CDS       T05026                                 
Name
(RefSeq) DNA repair protein rhp26
  KO
K10841  DNA excision repair protein ERCC-6
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    104246383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nsy03036]
    104246383
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104246383
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    104246383
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Other TCR factor
      104246383
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HDA2-3 ResIII
Other DBs
NCBI-GeneID: 104246383
NCBI-ProteinID: XP_009800493
UniProt: A0A1U7YBJ3
LinkDB
Position
Unknown
AA seq 1212 aa
MEEEEEDKILLSSLGVTSANPEDIEHDILEKATRHPGESNEAMGSAEEEIVERKKGNEEG
QDKKLDLYNKLRAVEVEIDAIKSGFEHLERFRRHEEEVPDTDGSSEAKQTESEQSVIQAP
LDDSNLQHALADDRLRSLLKTKAQLKKELSDFTDDTSSDALIRDLVKDQPEFKRKVKEVQ
KSSNKKSKRRKTTLLDDDDDFDAVLTAASSGFVETERDALVRKGMLTPFHQLKGFERRVQ
DSESFGRQSTAADINSNDNDLASTSIAKAVQSISQAAQARPTTKLLDSASLPKLEAPTHP
FQRLRKPLKIPQSLETTPEKNGDGTRKKKRPLPSKKWRKLASREQRQNEGSDVNTSSHED
NQGDIEDVEPPFVALEGGFRIPEAIFNSLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGK
TVQVLSFLGSLHFSNMYKPSIIICPVTLLRQWKREAKKWYPSFHVEILHDSAHDLSSKKK
QADSESDYESEDLLDSETEGNTSSRTSKKWDPVIARVVRSNSGLLITTYEQLRILGEKLL
DIEWGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGK
LGVLPVFEAEFAVPISVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTK
KTEHVLFCSLTPEQRSVYRAFLASSEVEQIFDGNRNSLYGIDVMRKICNHPDLLEREHSC
RDPDYGNPERSGKMKVVAEVLKVWKEQGHRVLLFSQTQQMLDIFERFLVTCEYNYRRMDG
VTPVKQRMALIDEFNNTDDIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARER
AWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKARDMKDLFTL
NDDENGGSTETSSIFSQVSEDVNIVGVPGNQDKQSFKATAEKDDDSNIGGGNNSKTKGKA
GDGNSNGELDGEASILRSLFDAHGIHSAMNHDAIMNAHDEEKLKLEEQASQVAQRAAEAL
RQSRMLRSRENVAVPTWTGKSGAAGGPSSVKRKFGSTVNPQLTSKSSEESLNDSASRANA
FAAGASAGKALSSAELLARIRGNQEKAVSDGLVHQFGMSASTSNGRAGSLNSGHRSASSS
YVVQPEVLVRQICTFIQQRGGKTNSASIVDHFRDRVPSKDLPLFKNLLKEIATLDKNPSG
SFWVLKPEYQDQ
NT seq 3639 nt   +upstreamnt  +downstreamnt
atggaagaagaggaggaagataagattttactcagcagtttgggtgtgacctctgcaaat
cctgaagatattgagcatgacatcttggaaaaggcaacaaggcaccctggggagagcaat
gaagctatggggagtgctgaagaagagatagtggaaagaaagaaaggcaacgaagaagga
caggataagaaattagatttgtataataaactgagagcagtagaagtagaaatagatgcg
attaagagtggttttgaacacttggagcgcttcagaagacatgaggaggaagtcccagat
actgatggtagcagcgaggcaaagcagacagagagtgagcaaagcgttattcaggcacct
ctggacgattcaaaccttcaacatgctttagctgatgatcgtctaagaagtctcctcaag
acgaaggctcaacttaagaaagaactttcggattttactgatgatacttcgtctgatgca
ttgatacgagatcttgttaaggatcaacctgaattcaaaagaaaggtgaaggaagttcag
aaatcaagcaacaagaagagcaaacgacggaagacgacattgttggatgatgatgatgat
tttgatgcagtgttaactgcagcatcttctggatttgttgaaacagaaagagatgcactg
gtaaggaaaggaatgttaacccccttccaccagctcaaaggctttgaacgccgggttcaa
gattcggagtcttttggcagacaaagtactgcagctgatataaacagtaatgacaatgac
ctggcttccaccagtatagccaaggctgtccagtcaatttcacaggcagctcaagctcgt
ccaaccaccaagttgcttgattctgcttcattaccaaaacttgaggcaccaacccaccct
ttccaaagactaaggaaaccccttaaaatccctcaatcattagagactacaccagagaag
aatggagatggtactagaaagaagaaaagaccattacctagcaagaagtggagaaagttg
gcatctcgggagcaaagacagaacgaaggatcagatgtcaatacctccagtcatgaggac
aaccaaggggatattgaagatgtagaacctccttttgtggcacttgaaggtggattcaga
atcccggaagctatctttaacagtctttttgactatcagaaggttggtgtacagtggctg
tgggaacttcactgtcaaagagctggtgggataattggagatgagatgggtcttggtaaa
accgtacaggttttatcttttctcggatcactgcattttagcaatatgtataagccaagc
attataatttgtccagtcactcttttgaggcaatggaagagggaagctaaaaaatggtat
cccagcttccacgtggagatattacatgattcagctcatgatctatcaagtaaaaagaag
caagcagattctgaaagtgactatgaaagcgaagatctgcttgacagtgagactgaagga
aacacatcttcgaggacttccaaaaaatgggatcctgtgatagctcgtgttgtaagatca
aattctggactattgatcactacttatgagcaactccgtatattaggagagaaattactt
gacatcgaatggggttatgcagtgttagatgaaggacatcgaattcggaatccaaatgct
gaagttactcttgtatgcaagcagctccagactgttcaccgtatcataatgacaggggcc
ccaattcaaaacaagctgagtgaactgtggtcattgtttgattttgtcttccctggaaag
ttgggagttctacctgtgtttgaggctgaatttgctgttcccatatctgttggggggtat
gctaatgcaacacccttgcaagtttccacagcttacagatgcgctgtggtgttgcgtgac
ttaatcatgccttacctcctccggcggatgaaagctgatgtcaacgctcatctcactaag
aaaactgagcatgtcctcttctgcagcctcacaccagagcagcgatctgtttaccgagct
tttcttgctagctctgaggttgaacagatctttgatgggaacaggaattctctgtatgga
attgatgtaatgcggaaaatttgcaaccatcccgatcttctcgagagagaacactcctgt
agagatccagactatggaaatcctgaacgcagtgggaaaatgaaagttgttgcagaagtg
cttaaggtatggaaagaacaggggcaccgtgttctccttttttctcaaactcaacagatg
cttgatatttttgagagatttctcgttacttgtgagtacaattataggcgaatggatggt
gtcactcctgtaaagcagaggatggctttgatagatgaatttaacaatacagatgatatt
ttcatcttcatcttgacaacaaaagttggtggtctggggacaaacttgacaggagctaac
agagtaatcatttttgatcctgactggaacccatcaactgacatgcaggcccgggagcgt
gcttggcgaattggtcaaaaaaaggatgttacagtgtatcgattgattacccgaggaacc
atagaggagaaggtgtatcatcgacagatttacaagcactttcttaccaacaaaatattg
aagaacccacagcaaagaagatttttcaaagcaagagatatgaaggacctatttacatta
aatgatgatgaaaatgggggatctacagaaacatctagcattttcagccaggtatctgaa
gatgtgaacattgttggggtcccaggtaatcaagacaaacaatcttttaaagcaacggca
gaaaaggatgatgattccaatattggcgggggcaataactcaaaaaccaagggaaaagcg
ggagatggtaacagcaatggagagttagatggagaagcaagcatcctgcggagtcttttt
gatgctcatgggatccatagtgcgatgaatcatgatgctatcatgaatgctcatgatgaa
gagaagttgaagctagaggagcaggcatcccaagtagctcagagagctgcagaagcactg
cgacagtcaagaatgcttcgaagtcgagaaaatgtagcagtgccaacttggactggcaaa
tcaggagctgctggggggccatcatctgttaaaaggaaatttggttctactgttaatcct
caattaaccagtaagtcatctgaagaatcactgaatgactctgctagtagggcaaatgct
tttgctgctggggcatctgctggaaaagcattatcttcagcggagttattggctaggatt
agggggaaccaagagaaagccgttagtgatggacttgtgcatcagtttggtatgtcggct
tcaacctcaaacggcagagcaggttctctaaatagtgggcatcggagtgcatctagcagc
tacgtagttcagccagaggtgttggttcgccagatctgcacgtttatacaacagagaggt
gggaaaaccaattcagctagcattgtagatcatttcagggaccgggtaccatcaaaggat
ctgccactgttcaagaatcttttgaaggaaatagcgactctggataaaaaccctagtgga
tctttttgggtgttaaagcctgaatatcaggatcagtag

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