Nicotiana sylvestris (wood tobacco): 104248296
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Entry
104248296 CDS
T05026
Name
(RefSeq) putative chromatin-remodeling complex ATPase chain isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104248296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104248296
03036 Chromosome and associated proteins [BR:
nsy03036
]
104248296
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104248296
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104248296
RSF complex
104248296
WICH complex
104248296
B-WICH complex
104248296
NORC complex
104248296
BRF complex
104248296
NuRF complex (fruit fly)
104248296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
Myb_DNA-binding
HAND
HDA2-3
DEAD
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
104248296
NCBI-ProteinID:
XP_009802832
UniProt:
A0A1U7YFE6
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MGKHSRSKSSSSEPPSDSSEEEQVQDQVNEEEDEEELEAVARTAEDSDEEDNDAATDVAD
QDDEDNEEEVAANEISKREKARLKEMERIKKKKIQEMLDSQNAAIDADMDNKGKGRLKYL
LQQTELFAHFAKSEQSTSQKKTKGRGRHASKVTEEEEDEEYLKDEEDGLSGNTRLVAQPS
CIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLREFRGITGPHMV
VAPKSTLGNWMNEIKRFCPVLRAVKFLGDPDERRYIREELLVAGKFDVCVTSFEMVIKEK
SALRRFTWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWALLNFL
LPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKV
GMSQMQKQYYKALLQKDLEVVNSGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGE
HLVENAGKMVLLDKLLPKLKERGSRVLIFSQMTRLLDILEDYLMYKGHQYCRIDGNTGGE
DRDASIEAFNKPGSEKFAFLLSTRAGGLGINLATADVVILYDSDWNPQADLQAQDRAHRI
GQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGA
EMVFSSKDSTITDEDIDRIIAKGEEAKAELDAKMKKFTEDAIKFKMDDTADLYDFGDEED
KNKVDFKKIISDNWVEPSKRERKRNYSESEYFKQTMRQSAPARPKEPRIPRMPQLHDFQF
FNTQRLSELYEKEVRYLMQTHQKNQVKDTIEVEEPEDAGDPLTAVEQEEKERLLEEGFST
WSRRDFNTFIRACEKYGRNDLKSIAAEMEGKTEEEVERYAKVFKERYKELNDYDRIIKNI
ERGEARISRRDEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGY
GNWDELKAAFRSSPLFRFDWFVKSRTTQELARRCDALIRLIERENQEFDERERQARKEKK
LAKNMTPSKRTLARQAAESPPTSKKRK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacactcgagatccaaatcctcgtcgtcggagcctccatcggatagttcggag
gaggaacaagtccaggatcaggtcaatgaagaagaagatgaagaggagcttgaggccgtc
gcgaggaccgctgaggactccgacgaggaggacaatgacgccgccaccgacgtggcagac
caagacgatgaggataatgaggaagaggttgcagccaatgaaatctccaagcgcgaaaag
gccaggttgaaagagatggagaggatcaagaagaagaaaatacaagaaatgttggattca
cagaatgctgccattgatgctgacatggacaacaagggaaaggggcgactgaagtatctc
ttgcagcaaactgagctatttgcacattttgccaaaagcgagcagtccacctctcaaaag
aagaccaaaggaaggggccgtcatgcatcaaaagtaactgaagaggaagaagatgaagag
tatctcaaagatgaagaagacggactttctgggaatacacgattggtggcacaaccctcc
tgtattcaagggaagatgagggattatcaactcgctggtttgaactggctgatacgactg
tatgagaatgggataaatggaatacttgctgatgaaatgggtcttggtaagacattgcaa
accatctccttgctgggatatctacgtgaatttagaggaataactggtcctcatatggtt
gttgctccaaaatcgactcttggcaattggatgaatgaaatcaaacgtttctgtcctgtt
ttacgtgctgttaagttccttggagatcctgatgaaaggagatacatacgtgaggagtta
cttgttgcggggaagtttgatgtgtgtgtcacaagctttgagatggttatcaaagagaag
tctgctttacgacgctttacttggcgttacatcataattgatgaggcacataggatcaag
aatgaaaattctcttctttcaaaaacaatgaggctctacaacactaattatagactactt
atcacggggacaccacttcagaataatcttcacgaactctgggcgcttctgaactttctg
ttgcctgagatatttagctcagctgagacttttgatgagtggttccagatttctggtgaa
aatgaccagcaggaggtggtccaacagctacataaggtcctccgtccatttcttcttagg
aggctgaagtctgatgtggagaaaggcctgcctcccaaaaaagaaacaattcttaaggtt
ggtatgtcccagatgcagaagcagtactacaaggctctgctgcagaaagatcttgaggtt
gtcaattctggaggagagcgcaagcgtcttctcaatatagcaatgcagctacgtaaatgc
tgtaatcatccatatcttttccaaggtgctgagccaggacctccatatacaacaggagag
catctcgtagaaaatgctgggaaaatggttcttctagataagttgcttcctaaattgaag
gaacgtggctcaagggtcttaatattttcacagatgacaaggctattggacatccttgaa
gactacttgatgtacaaaggtcaccaatattgtcggattgatggaaatactggtggtgag
gatcgtgatgcttctattgaggcttttaacaaaccagggagtgaaaaatttgcattctta
ttgtcaaccagagctggtggtcttggtatcaatcttgctacagcagatgttgttattctt
tatgatagtgattggaatccacaggctgatttgcaggctcaggaccgagcccataggatt
ggtcagaagaaggaagtccaagtattccgcttctgcactgagtataccattgaggaaaag
gtgattgaaagggcttacaagaagctagcacttgatgcattggttatccagcaggggcgg
ctagcagagcagaaagctgttaataaggatgagctgctgcaaatggtgcgattcggtgct
gaaatggttttcagttccaaagatagcaccattactgatgaggatatagatagaataatt
gctaaaggagaagaggcaaaagctgaacttgatgccaagatgaagaagtttacagaagat
gctatcaagtttaagatggatgacactgctgatttgtatgactttggtgatgaggaggat
aaaaacaaggtggatttcaagaaaattatcagcgacaattgggtagaaccttcaaaaaga
gaaagaaagcgcaactactcagagtctgaatacttcaagcagaccatgcgtcagagcgcc
cctgcaagacctaaagagcctcgaattcctcggatgcctcagctgcacgattttcagttc
ttcaatacacagagactgagtgagttgtatgagaaggaagtgcgctatcttatgcaaaca
caccagaagaatcaggttaaagacactatagaggtggaagaacctgaagatgctggagat
cctttaacagctgtagagcaggaggagaaggagcgactattggaagagggattttcaaca
tggagtagaagagacttcaatacctttatcagggcttgtgagaagtatggtcgcaatgac
ttaaaaagtattgctgctgaaatggaagggaaaactgaggaggaggttgaaagatatgcg
aaagttttcaaagaaagatacaaagaactaaatgattatgacaggattattaagaacatt
gaaagaggagaggctagaatttcacggagagatgagattatgaaagcaattggtaagaag
ctggatcgatacaaaaatccatggttggaattgaagatccagtatggtcagaacaaaggg
aagctgtataacgaggaatgtgatcgtttcatgatatgtatggttcacaagctcggctat
ggaaattgggatgagctgaaggctgcatttcgctcatcacccttattccgatttgattgg
tttgtgaagtctcgtaccactcaagaacttgccagaagatgcgatgcacttattcggttg
attgagagggaaaatcaagaatttgatgagagggagaggcaggcacgcaaagaaaagaag
cttgcaaagaacatgactccatcaaagcgcaccttggcaagacaggcagctgaaagccct
cctacttcgaagaagcggaagtaa
DBGET
integrated database retrieval system
