KEGG   Nicotiana tabacum (common tobacco): 107784173
Entry
107784173         CDS       T04643                                 
Name
(RefSeq) lysine-specific demethylase lid-like
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nta01009]
    107784173
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nta03036]
    107784173
Enzymes [BR:nta01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     107784173
Protein phosphatases and associated proteins [BR:nta01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107784173
Chromosome and associated proteins [BR:nta03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107784173
SSDB
Motif
Pfam: JmjC PLU-1 zf-C5HC2 JmjN ARID PHD KDM5_C-hel DUF5661
Other DBs
NCBI-GeneID: 107784173
NCBI-ProteinID: XP_016460742
UniProt: A0A1S3Z950
LinkDB
Position
Un
AA seq 1309 aa
MGRGRPRAVELGQNTSASPIGLLNIPPGPVYYPTEDEFKDPLGFIYKIRPEAEKYGICKI
IPPKSWKPPFALDLNAFMFPTKTQAIHQLQARCASCDPKTFELEYYRFLEEHCGKKAAKK
RVVFEGEELNLCKFFNSVKRLGGYDKVAKEKKWGEVFRFVRPAGKISECAKHVLCQLYLE
HLCDYEEYYNKLNKMRNKSYRRGNGSERKRESDSQFSSSKRRRKNSECDRTETCKAKEEE
HDQICEQCKSGLHGEVMLLCDRCNKGWHIYCLSPPLKQIPPGNWYCLQCLNSEKDSFGFA
PGRDLPLDAFRRIADRARKKWLGSASISQVELEKKFWEIVDGSAGEVEVKYGSDLDTSIY
GSGFPRVTDEKLSSVEQGTWDEYSASPWNLNNLPKLPGSMLRAVHHSIAGVMVPWLYIGM
LFSSFCWHFEDHCFYSMNYLHWGEPKCWYSVPGNEAQAFEKVMRNSLPDLFDAQPDLLFQ
LVTMLNPRVLQENGVPVYNVVQEPGDFIITFPRSYHGGFNFGLNCAEAVNFAPADWLPHG
GFGADLYQLYRKPAVLSHEELLCAVARSEFDSKAAPYLKTELARIYSREKSWRERLWKNG
IVNSSAMPPRRKPEYVGTEEDPTCIICQQYLYLSAVVCSCAPSSFVCLEHWEHLCECKPQ
KRRLLYRHTLAELNDLVFTTDKGNHEEAAKNFRKQLLSSNDPPALSKKVKGGCITHVQLA
EKWLMKFSKLFQDPYSSDAYRRAIKEAEQFMWAGHEMDPVRELVKKLIEAQSWAQNVKDC
LSKVKSWMSDRSSDVVKVQMEVVNSLLSLNPVPCNEPAHLRLKDFQKEASQLTLEIDSVL
SSCSNILVSDLEALYSKTVDCPIYIEESEELLNKLSSVKAWAERVRKCVSETSARVEADI
VYKLEKESLSLQVQLPEGELLLDLIRQVECCQSQCRDLLEGSLSLKELELLLNKWDGLAV
NITELELLRQYHKDAMSWIARANHALLGISEREDQETVFGELTCLLKDASLLKVKVEELP
CLDVELKKAGCRVKALKALRCKMSMDYIEQLLMEASILQIEKEKLFADVSEVKANAVVWE
ESARRVLVSKEQISEFEDVIRASEEIFVILPSLDEVKDAVSIAKSWLSRSQPFLSRDSMA
LGSSPLEVETLKELVSDSKLLKLSLREQLMIQTLLDTCTRWEQDACSVLYDTKCLLNVEN
IDDEILIRHGKSEKQIQAIDSVVEAGQGLGFKFDLVPKLQDACYTLRWCFKALSFATAIP
TLEVINCHMCQFSFPPKGRYDLDTDMLFLLLLNMAVVRRHVRKYVIDIG
NT seq 3930 nt   +upstreamnt  +downstreamnt
atggggagagggaggcctagggctgtagaattagggcaaaatacaagtgcatccccaatt
gggttattgaatataccacccgggccagtgtattatccaactgaggatgaatttaaggac
cctttagggtttatttacaagatcaggccagaggctgagaaatatggcatttgtaaaatt
atcccacctaagagttggaaacccccttttgcattggatttgaatgccttcatgtttccg
acgaaaacgcaagcgattcatcagttacaggctcggtgcgcgtcttgcgatccgaagacc
tttgaattagagtactataggttcctagaggagcattgcgggaagaaggcggcgaagaaa
cgtgttgtgtttgagggggaggagcttaatttgtgtaagttctttaattccgtcaagcgg
ctcggagggtacgataaagtagctaaggaaaagaagtggggcgaggtttttaggttcgta
cgacctgctgggaagatttcggagtgcgccaagcatgtattatgtcagttgtacctggaa
catttgtgtgattatgaagagtactataataagttaaataagatgagaaataaaagttac
aggagaggaaatggaagtgagagaaaaagggagtcagactcccaattctcgagttcaaag
agaaggagaaagaatagtgagtgtgaccgaactgaaacgtgtaaggcgaaggaggaagaa
catgatcaaatatgtgaacaatgcaaaagtggattgcacggggaggtgatgcttctctgt
gatcggtgcaataaagggtggcatatttactgtttatcaccacctctgaaacaaattcca
cctgggaactggtattgcttgcaatgcttgaattctgaaaaggacagcttcggttttgca
cccggtagagacttaccattggacgcatttaggcgcattgctgatcgtgccaggaaaaaa
tggcttggttccgcatctatttcacaagtggaattagaaaagaagttctgggaaattgtg
gacggatcagctggggaggttgaagtgaagtatggcagtgacttggatacttccatctat
ggtagtggatttccacgtgtaaccgacgaaaaactatcatcagttgaacaaggtacatgg
gatgaatatagtgctagcccatggaatctcaataacttacccaagttgccaggttcgatg
cttcgagctgtacatcatagcattgctggtgttatggtgccttggctgtatatcggaatg
ctattctcctcattctgctggcattttgaagaccactgcttttactccatgaattatctt
cactggggagagccgaaatgttggtatagtgttcctggaaatgaagcccaagcttttgag
aaggtaatgcgtaatagccttcccgatctgtttgatgcgcaaccagatctgctatttcag
cttgtaaccatgctgaatccacgtgtgttgcaagaaaatggggttcctgtttataatgta
gtacaggagcctggggacttcattattacctttcccagatcgtatcacggaggcttcaac
ttcggcttaaattgtgctgaggctgtcaattttgcccctgccgactggttacctcatggt
ggatttggagcagatctttaccagctttatcgcaaacctgctgttttgtctcatgaagag
ctgctctgtgcagtagccaggagtgaatttgacagcaaggcagcaccttacttaaaaaca
gaactggccaggatctattctagagaaaagtcttggagagagcggctttggaaaaatggc
attgttaattcttctgccatgccgcctcgtcggaagcctgaatatgtgggcacggaggag
gatcctacatgcatcatatgccagcaatatttgtatctttctgctgtagtatgcagctgt
gcaccatcatcttttgtttgtcttgagcactgggaacatttgtgtgaatgtaagccacaa
aagcgtcgactcctttatcgtcatacgctggctgaattgaatgatttggtgtttactact
gataagggtaatcatgaagaggctgcaaaaaacttcagaaagcaacttctatcttccaac
gatccacctgctttgtcaaaaaaggtaaaaggtggatgtatcacacacgtgcagcttgct
gaaaaatggctgatgaagttcagtaagctttttcaggatccttattcttcagatgcttat
cgtcgtgcaataaaggaagccgaacagtttatgtgggctggtcatgaaatggatccagta
agagagttggtgaagaagttgattgaagctcagagttgggctcaaaatgttaaggactgt
ctctctaaagtaaaatcttggatgtctgatcgcagtagtgatgtagtgaaggtgcagatg
gaagttgttaacagtttgctcagtttaaaccctgtaccctgtaatgaacctgcacatctc
agattgaaggatttccagaaagaagcgagccagctgactctggagattgattctgttctt
tcatcatgctcaaatattcttgtatctgatttggaggccttgtactccaagactgtagat
tgccccatctacatcgaagaaagtgaagaattgttgaacaagttgtcgtcagttaaggct
tgggctgaaagagtaaggaaatgcgtgtctgagacttctgcaagagttgaggcagatatt
gtctacaaattagagaaggagagtttaagccttcaagtgcaacttcctgaaggtgaactg
ctcctagatttaattagacaagttgaatgttgtcaatctcagtgccgtgatctgttggaa
ggttctctcagtctcaaggaacttgaattacttctcaacaaatgggatggtttggcggtt
aatattacagagcttgaacttctaagacaatatcataaagatgctatgtcttggatagcg
cgtgctaatcatgctctattgggcatcagcgaaagggaggatcaagaaactgtatttggc
gagttaacttgccttctaaaggatgcgtctttgcttaaagttaaagtggaggagctgcct
tgtttggatgttgagctaaagaaggctggttgtagggtaaaagctctgaaggcacttcgt
tgcaaaatgtccatggattatattgagcagctgttgatggaggctagcatattgcagatt
gagaaagagaagttgtttgctgatgtttctgaggtaaaagcgaatgctgtagtttgggag
gaaagtgccaggcgcgtccttgtaagcaaggaacaaatatctgaatttgaggatgttata
agggcttccgaggagatatttgtgattctgccttctcttgatgaagtcaaggatgcggta
tcaattgcgaagtcttggttatctaggtcacagccctttttatcacgtgactccatggca
cttggttcaagtcctcttgaagtagagactttgaaggaattggtatcagactctaagctt
ttgaagctatctttgagagaacaactgatgattcaaacattgcttgatacttgcaccagg
tgggagcaggatgcctgctctgtgttgtatgatacaaagtgtctgttgaatgtcgaaaat
atagatgatgaaatattgatcagacatggcaaaagtgaaaagcaaatacaagccatagac
tcggttgtagaagcaggtcaaggtcttggtttcaagtttgatttggttcctaaacttcaa
gatgcttgttatacacttcgttggtgctttaaggctctatcttttgctactgcaattcca
acacttgaggtaattaattgtcacatgtgtcagttttcttttccacctaaagggagatac
gatctggacactgatatgttgtttctgcttcttctcaatatggctgttgtgagaaggcac
gtgagaaaatatgttattgatattggatga

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