Nicotiana tabacum (common tobacco): 107791059
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Entry
107791059 CDS
T04643
Name
(RefSeq) protein STABILIZED1-like
KO
K12855
pre-mRNA-processing factor 6
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107791059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107791059
Spliceosome [BR:
nta03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107791059
Complex C
U5 SnRNP specific factors
107791059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
ubiquitin
TPR_17
PMC2NT
Motif
Other DBs
NCBI-GeneID:
107791059
NCBI-ProteinID:
XP_016468538
UniProt:
A0A1S3ZW41
LinkDB
All DBs
Position
Un
AA seq
691 aa
AA seq
DB search
MVFINLPDNKTLSLDINPSISSLQNLNLKIHENFHIPITQQFLFLSCRRLLNTDVRLSDL
GIFPNSTLTLHVPLLGGMQAPAAPKARLDFLNTRPPPNYVAGLGRGATGFTTRSDIGPAR
AAPDLPDRSAAAVGGAAPAAGGVGRGRGKGGAGEEEEEDDNEEKGYDENQKFDEFEGNDV
GLFASAEYDEDDKEADAIWEAIDQRMDSRRKDRREARLKEEIEKYRASNPKITEQFADLK
RKLYTLSSDEWDSIPEIGDYSLRNKKKRFESFVPVPDTLLEKARQEKEHVSALDPRSRIV
GGMETPSAQTPVADLTAVGEGRGTVLSVRLDRILDSVTGQTVVDPKGYLTDLKSMKITSD
AEISDIKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKMQVARQLIKKGCEECPKNEDV
WLEACRLASPLEAKAVIAQGVKANPNSVKLWMQASKLEEDTANKSRVLRKGLEHIPDSVR
LWKAVVELANEEDARLLLQRAVECCPLHVELWLALAKLETYESAKKVLNKAREKLPKEPA
IWITAARLEEANGNTASVGKIIERAIRALQREGLEIDREAWMKEAEGCERAGSLGTCQAI
INNTVGIGVEEEDRKRTWVADAEECKKRGSIETAKYIYSHALTVFRTKKSIWLKAAQLEK
SHGTRESLDALLRKAVTYIPKAEVLWLMGAK
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggtttttatcaatcttcctgataacaaaaccctatccctagacattaatcctagtata
agttcgctccaaaacctaaacctaaaaattcatgaaaatttccacatcccaatcacccaa
cagtttctttttctttcctgtcggcggttactcaacaccgacgtacggttatccgatcta
ggaattttccctaattcgactctaaccctacacgttcctctactcggaggtatgcaagca
ccagcggcaccgaaagcgcgactcgatttcctaaacacaaggcctcctccgaattatgtt
gctggattgggccgtggtgctacgggtttcactacccgttctgatattgggcctgcccgt
gctgcccctgacctcccagatcgttcagctgctgctgttggcggcgctgcaccagcagct
ggcggcgttggccgtggccgtggcaagggtggtgcgggagaggaagaagaagaggatgat
aatgaggaaaaggggtatgatgagaaccagaaattcgacgaatttgaaggtaatgatgta
gggttatttgcttctgctgagtatgatgaagatgataaagaagctgatgctatttgggaa
gctattgatcagagaatggattcaaggaggaaagatagaagagaagctaggttaaaggaa
gaaattgagaagtatcgagcgtctaacccgaagatcacggaacagtttgctgatttgaag
aggaaactgtatacattgtcgagtgatgagtgggatagtatacctgaaatcggggattat
tcattacgaaacaagaaaaagaggtttgagagttttgtgcctgttccggatacccttctg
gagaaggctaggcaggagaaagaacatgtaagtgcattggatccaaggagcaggatagtt
ggtggcatggagacaccttcagcgcaaacgcccgtcgctgatttgactgctgtgggtgaa
gggagaggaaccgtgttgtcggtgaggttggataggattttggactcggttactggacaa
actgtggtggatcctaagggatacttgactgatttgaagagcatgaagattactagtgat
gctgagatttcggatataaagaaggctaggttgttgcttaagtcggttactcagacaaat
ccgaagcatcctcctggttggatagcagctgctagactggaggaggttgcggggaagatg
caggtagcgaggcagttgataaagaaaggttgtgaagagtgtcctaagaatgaggatgtt
tggttggaggcgtgccgtttggcgagcccccttgaggctaaggcagtgattgctcaaggt
gttaaagcaaatcctaattcagtgaaattgtggatgcaggcctcaaagttggaggaagat
acagcgaataagagccgtgttttgaggaaaggtctagagcatatccctgattcggtgagg
ttgtggaaagctgttgtggagttggctaatgaggaagatgctagacttttgcttcagagg
gccgtagaatgctgtccattgcatgtggagctgtggcttgctcttgctaagttggaaact
tatgaaagcgcaaagaaggtacttaacaaagctagagaaaagcttcctaaagagcctgcc
atctggatcactgcagctaggctggaagaagccaatgggaacactgcttctgttgggaaa
attattgaaagggcaatccgggctttgcaaagagaaggtttggagattgacagggaggct
tggatgaaggaggctgaaggatgcgaaagagctggttcccttgggacttgccaggcaata
ataaataacactgttgggattggtgttgaggaagaagataggaagagaacctgggttgct
gatgctgaggagtgcaagaaacggggttcgattgaaacagcaaaatacatttattcacat
gctcttactgtatttagaactaagaaaagcatctggcttaaagcagcacagctcgagaaa
agccatggcaccagggagtcacttgatgcactgcttcgaaaagcagtgacctacattcca
aaggccgaagttctatggttgatgggtgccaag
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