Nicotiana tabacum (common tobacco): 107792831
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Entry
107792831 CDS
T04643
Name
(RefSeq) chromodomain-helicase-DNA-binding protein Mi-2 homolog
KO
K11642
chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107792831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nta03036
]
107792831
Chromosome and associated proteins [BR:
nta03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107792831
Chromatin remodeling factors
NuRD complex
107792831
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Chromo
Helicase_C
SNF2-rel_dom
PHD
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
107792831
NCBI-ProteinID:
XP_016470560
UniProt:
A0A1S4A1T1
LinkDB
All DBs
Position
Un
AA seq
1416 aa
AA seq
DB search
MEEEKKVKSLKRKRMTGQSFRKWVIQQAQRRKCSENANKKEDHVSEEEHHVTESNRLNEE
ETIKYAHRVDDQREKHACPSEKNDKKDIEPFRSELRVDRTANCKGSKQDDKIEGESKDCL
ICKQEGNLLSCAGQGCKRSFHLSCVDPPLSYFPPGPWHCYWCVRRKLKLGVHSVSEGVDS
LLDVRECNLGNEVMQKREYLVKYKGLAHVHNRWITEKQLLLEAPAALRRFKKKNKSVSWK
TEWSLPHRLLDKRLIAVTDHNNTHVHGIDENDADCHYEWLVKWTGLGYSHATWEVENASF
LRSLEAVKLMTNYEIRHQQATKELHPLTEDEKRKADYQELPRPLFGSAPQVHNHLTYINT
LRKYWQKGQSAVVIDDQERILKVVLFLLSLPKDIGLPFLIITTSAELPLWEAEFLHWAFS
ANIVVYKGNKDIRAIIRTLEFHNKQGAIMFQVLLSPYDAIVEDLEMLQPISWGAVIIDQC
QGSAMSMLLSQIKVLVSDMRLLIFRQLEGRCDRGFNHSNVLSLLYPEYDKADNDLSYTDP
NIDLTEFKERLKRFVAYECNSSTSKFIEYWVPVKLSNEQIEQYCNCLSSNSALLCSRWKN
DSPNSLHNILVSTRKCCDHPYLEDRSLRDIVLEGIPVDQHFDAEIKLSGKLEFLYKILRE
IKQQGQRVLILFRSLGGSGVISIGDILDDFIHRKFGEDSYTRISGEFSRKLKQATLNKFN
NEGSGKFACLMETRVCAPSVKLSRIDTIILFNSDWDPTNDLRSLQKIAIYSKLEQIKVLR
LYSYFTVEEKALILAKQGMTIDSNIENIKQFHELLTWGASFLFKMLDCFHVQSSQSKRSS
DIAALDDVFAELLGLISSNSENSDYNSCSKILKVQQNGGTYPRNISLLGEVEMQLMDDSS
FVRGMTNEFPNVFWTSLLHGTVRRWKHLPRLSQGIRRKVRPRVDLCQPSEREQVSEKKGR
KEGNKVHLTPEPKLRTKRKLHVQGKRLKLGMSHLSAGNKYKCRRLVTNPSLQCDIDRQGR
AAIDKVQSRVGLTMTDQHRKESISMKSNQLPDSNLPASTGRDQAHAFVPIDNHQSHRNCI
DSSSHQVLDFMDLQPEELNFPIDSSIQWSTGNLLLQQHTSTGAGNDASMRSRNSQEYQCR
PDASPDASELLQSPCPYPLQMEMERILKEREQTTKLHENLNLLLISEYEKELDAIKKKYD
LLFEIADTELVQKHKDLDTLYNKVHMNKLLAEAMTQIQNTAWSLEMTEGTGQSSPSRPSR
VPAVTAASTQPASQSSNILNYPSLVSEPVNSEQRAADHQISSQNFSMAVIPSQNAELPIV
TESAAVPPTSARVTLQTTTSANLPISGSPMTPTRNLQPVILTPFLSTSVPSQLSIQTFSY
AASPATSCVLRAPAPHLRHFRPLPTMNSWNSSLLQW
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagaaaaaggtgaaaagtttgaagaggaagagaatgactgggcaaagcttt
agaaagtgggtaatacaacaagcacaacgaagaaagtgctctgaaaatgctaataaaaag
gaggatcacgtgtctgaagaagaacaccatgtgactgaaagtaaccgtctcaacgaagaa
gaaaccataaaatatgcacacagggtggatgatcaaagagaaaaacacgcttgtccatca
gagaaaaatgacaaaaaggacattgagccttttagatcagagcttagagttgacaggact
gcgaattgcaagggctccaaacaggatgataagattgaaggtgaatctaaggactgttta
atctgcaagcaggagggaaatctattatcctgtgctggacaaggatgcaaaaggagcttc
catctttcttgtgttgacccccctctgtcctattttccacctggaccatggcactgttat
tggtgtgttagaaggaagttgaaactaggtgttcattctgtgtctgaaggagtagattcc
cttttggatgtcagagagtgtaatttgggtaatgaagttatgcaaaagcgggagtattta
gtaaagtacaaaggtcttgctcatgttcataatcgctggattacagagaagcagctgctt
cttgaggctccagcagcccttagaagattcaagaaaaaaaacaagagtgtaagttggaaa
actgaatggagtcttccccatcgtttactagacaagaggttgatagcagttacagatcac
aacaacactcacgtgcatgggattgatgaaaatgatgcagattgccattatgagtggctt
gtgaaatggacaggtctgggctacagtcatgccacatgggaagtggagaatgcttcattt
ctaaggtcgcttgaggcggtcaaactcatgactaattatgaaatccgacatcagcaggct
acgaaagagttgcatcctttgacggaagatgagaaaaggaaagccgactatcaagaactg
ccgagacctctatttggaagcgctcctcaggtccataatcatcttacttatatcaacact
cttcgtaaatattggcagaagggtcagagtgctgtcgtcattgatgaccaggagcggatt
ttgaaggtggtcttatttctattatccttgcccaaggatattggtttgccttttctcata
atcacaacttctgctgaacttcctctttgggaagctgagttcttacattgggcattttct
gctaacattgttgtgtacaaaggtaataaagatatacgagcaattataaggacactcgag
tttcacaacaaacaaggtgccattatgtttcaggttcttctgtcaccttatgatgctatt
gttgaggatcttgaaatgcttcagccaataagctggggagcagtaattatagatcagtgc
cagggttctgccatgtcaatgcttctctcacaaattaaagtgcttgtttctgatatgaga
ttgcttattttccgtcaactagagggtagatgtgatagagggttcaatcacagtaatgtt
ctctctttactttatcctgagtatgacaaggccgacaatgatctgtcgtacactgatccc
aacatagacctaactgaattcaaggaaaggttaaagcgctttgttgcatatgagtgcaac
tcctccacatccaagttcattgagtactgggttccagtcaaactctccaatgaacaaatt
gagcaatactgcaattgcctctcttcgaattcagctttgctttgctcacgttggaagaat
gactcaccaaattccctccacaacatacttgtatctaccaggaagtgttgtgatcaccct
tatctcgaagaccggtctctgcgagacatagttctagaaggaattcctgtagatcagcac
tttgatgctgaaattaaactaagtggaaaattggaattcctctataagattcttcgtgag
atcaaacagcaaggacaaagagtactcattctttttcggtctcttggtggctcgggggtt
atttccatcggggacatcttggatgattttattcatcgaaaatttggtgaggattcttat
acacgcattagtggggaattcagtcgtaaattgaagcaagctaccttgaacaagttcaac
aatgagggaagtgggaaatttgcttgtttgatggagactcgtgtttgtgctcctagtgtc
aagctttcgagaatagatacaattattttgtttaacagtgactgggacccaacaaatgat
ttaagatccctgcagaagattgcaatttattcaaaattggagcaaataaaggtactccgt
ctatattcatattttactgttgaagagaaagcactcattcttgcaaagcaaggtatgaca
attgacagcaacatagagaatataaaacaattccatgagctgctaacttggggtgcctct
tttcttttcaaaatgcttgattgtttccatgtacaatcttcacaatcaaaaagatcgtct
gacattgctgctttagatgatgtctttgctgaattgttaggcctgatatctagtaatagt
gagaacagtgattataacagctgttcaaagatattgaaagtgcagcagaatggagggact
tatccaagaaacatatctctacttggtgaagtggaaatgcaactgatggatgattcttct
tttgtgagaggaatgacgaatgaatttcccaacgttttctggacaagtctgttacatgga
acggttcgtaggtggaaacacttgcctagactatcacaagggattagaaggaaagttaga
ccccgggttgatttgtgtcagccatccgaaagggaacaagtttctgaaaagaaaggcagg
aaagagggcaataaagttcatcttactccagaacccaagttaaggacgaaaaggaaattg
catgtccagggaaagagactcaaacttgggatgtctcatctttctgctggtaataagtat
aaatgcaggcgtcttgtgactaatcccagtctgcagtgcgatattgaccggcaaggtaga
gcagctattgacaaggttcagtcccgagttggcttaaccatgactgatcagcatcgaaaa
gaaagtatttccatgaaatcaaatcagctgccagattccaatttgcccgcctctactggc
cgtgatcaagctcatgcatttgtgcccattgacaatcaccagagccataggaattgtatt
gattcttccagtcaccaggttttagatttcatggaccttcagccagaggagttgaatttt
ccaatagactcttctattcagtggtctacaggaaatttgctactgcaacaacatacgagt
acaggtgcaggaaacgatgcgagtatgagaagcagaaacagccaggaatatcaatgtcgt
cctgatgcctctccagacgcatctgagctgcttcaatccccttgcccatacccacttcaa
atggagatggagaggatactaaaggagagagaacaaactacaaaattgcatgaaaatctg
aatttgctcctgatatctgaatatgaaaaagagctagatgcgataaagaagaagtatgat
ttgctgtttgagattgctgacacagaattagttcaaaagcacaaagaccttgatacactc
tacaacaaagtgcatatgaacaagttactagctgaagccatgacccagatacaaaatact
gcttggtcactagagatgacagaaggaactggacaatcatcaccaagcagacctagtaga
gtcccggcagtgactgctgcatcaacacaaccagcaagtcaatcatcaaatattctaaac
tatccaagtttagtttctgaacctgtcaactcagagcaacgagctgcggaccatcaaata
tcctctcagaatttttcaatggctgtcattccatctcaaaatgctgaattgcctatagtg
acagagtcagctgcagttccgccaacaagtgcaagggtcaccctgcaaacgacaacctct
gctaatctgccgataagtggttcacctatgaccccaacacgaaacttgcagcctgtcatc
ctcacaccatttttatcgactagtgttccaagtcaactctcgatccaaacttttagttat
gcggcgagccctgcaacaagctgtgtactaagggcaccagctccacatctgagacatttt
agaccactgccaacaatgaattcttggaattccagcctgttgcagtggtga
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integrated database retrieval system
