KEGG   Nicotiana tabacum (common tobacco): 107796602
Entry
107796602         CDS       T04643                                 
Name
(RefSeq) THO complex subunit 4A-like
  KO
K12881  THO complex subunit 4
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03013  Nucleocytoplasmic transport
nta03015  mRNA surveillance pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107796602
  09122 Translation
   03013 Nucleocytoplasmic transport
    107796602
   03015 mRNA surveillance pathway
    107796602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nta03019]
    107796602
   03041 Spliceosome [BR:nta03041]
    107796602
Messenger RNA biogenesis [BR:nta03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107796602
    TREX complex
     107796602
Spliceosome [BR:nta03041]
 Complex C
  Other components
   EJC/TREX
    107796602
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107796602
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_5 RRM_3
Other DBs
NCBI-GeneID: 107796602
NCBI-ProteinID: XP_016474881
UniProt: A0A1S4AE25
LinkDB
Position
Un
AA seq 247 aa
MSNLDVSLDDLIKRNKSSSSRNPRPRTSGSGSGSGGPGPRRRFPNRAANRSAPYSSGPVH
APESTWDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDIKELFSEAGDI
KRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIEFAGPNIGAPALPP
IRNRLYRNPNPAPRSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYH
SEAMETN
NT seq 744 nt   +upstreamnt  +downstreamnt
atgtcaaatctcgatgtatccctcgacgatttaatcaaaaggaacaaaagttccagcagt
cggaaccctagaccaagaacatccggatctggatccggatccggaggccccggtccaagg
cgtcgcttccctaaccgtgccgccaaccgttccgctccatattcctccggaccggttcac
gcaccggagagtacatgggaccacgacatgtttgcagagcatgccccggcgtatccagct
gcccgtggagccggtgggatatcggggattgagaccggtatcaagctcctcatttcaaac
ttggattatggggtttcaaatgaagatatcaaggagcttttttcagaagctggtgatata
aagcgttactcaattcattatgacaaaagtggaagatcaaagggaactgcggaagtaatc
ttttcacgtcgaagggatgcagaggcagctatcaagaaatataacaatgttcagctagat
ggaaagcccatgaaaattgagtttgcgggaccaaacattggtgctcctgctcttcctcca
attagaaatcgtctgtacagaaatccaaatcctgctccaagaagtcaacaaagaggtggt
ggatttagacgtcctcctcgaggtggtagagggagcatgagaaaggagggtggaaggggc
agaggtcgtggtgagaacatttctgcagaagatcttgatgccgacttggaaaagtatcat
tcagaagcaatggagacgaactga

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