Nicotiana tabacum (common tobacco): 107796602
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Entry
107796602 CDS
T04643
Name
(RefSeq) THO complex subunit 4A-like
KO
K12881
THO complex subunit 4
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03013
Nucleocytoplasmic transport
nta03015
mRNA surveillance pathway
nta03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107796602
09122 Translation
03013 Nucleocytoplasmic transport
107796602
03015 mRNA surveillance pathway
107796602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nta03019
]
107796602
03041 Spliceosome [BR:
nta03041
]
107796602
Messenger RNA biogenesis [BR:
nta03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107796602
TREX complex
107796602
Spliceosome [BR:
nta03041
]
Complex C
Other components
EJC/TREX
107796602
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107796602
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_5
RRM_3
Motif
Other DBs
NCBI-GeneID:
107796602
NCBI-ProteinID:
XP_016474881
UniProt:
A0A1S4AE25
LinkDB
All DBs
Position
Un
AA seq
247 aa
AA seq
DB search
MSNLDVSLDDLIKRNKSSSSRNPRPRTSGSGSGSGGPGPRRRFPNRAANRSAPYSSGPVH
APESTWDHDMFAEHAPAYPAARGAGGISGIETGIKLLISNLDYGVSNEDIKELFSEAGDI
KRYSIHYDKSGRSKGTAEVIFSRRRDAEAAIKKYNNVQLDGKPMKIEFAGPNIGAPALPP
IRNRLYRNPNPAPRSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYH
SEAMETN
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatctcgatgtatccctcgacgatttaatcaaaaggaacaaaagttccagcagt
cggaaccctagaccaagaacatccggatctggatccggatccggaggccccggtccaagg
cgtcgcttccctaaccgtgccgccaaccgttccgctccatattcctccggaccggttcac
gcaccggagagtacatgggaccacgacatgtttgcagagcatgccccggcgtatccagct
gcccgtggagccggtgggatatcggggattgagaccggtatcaagctcctcatttcaaac
ttggattatggggtttcaaatgaagatatcaaggagcttttttcagaagctggtgatata
aagcgttactcaattcattatgacaaaagtggaagatcaaagggaactgcggaagtaatc
ttttcacgtcgaagggatgcagaggcagctatcaagaaatataacaatgttcagctagat
ggaaagcccatgaaaattgagtttgcgggaccaaacattggtgctcctgctcttcctcca
attagaaatcgtctgtacagaaatccaaatcctgctccaagaagtcaacaaagaggtggt
ggatttagacgtcctcctcgaggtggtagagggagcatgagaaaggagggtggaaggggc
agaggtcgtggtgagaacatttctgcagaagatcttgatgccgacttggaaaagtatcat
tcagaagcaatggagacgaactga
DBGET
integrated database retrieval system