Nicotiana tabacum (common tobacco): 107799899
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Entry
107799899 CDS
T04643
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107799899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nta04131
]
107799899
Membrane trafficking [BR:
nta04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107799899
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
Vps39_2
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
107799899
NCBI-ProteinID:
XP_016478552
UniProt:
A0A1S4AP85
LinkDB
All DBs
Position
Un
AA seq
962 aa
AA seq
DB search
MNSIVMSRMPSENGIDGDDEREEEDSEEDSGEEEEEEEHEPRLKYQRMGGSVPSLLSTDA
ATCIAVAERMIALGTHAGAVHILDFLGNQIKEFAAHTAAVNDLCFDTEGEYVGSCSDDGS
VVINSLFTDERMKFDYHRPMKAIALDPDYARKSSRRFVTGGLAGHLYLNVKKWLGYRDQV
LHSGEGPIHAVKWRSSLVAWANDTGVKVYDAANDQRITFIERPRGIPRPELLLPHIVWQD
DTLLVIGWGTSVKIALIRTTQSKGVNGTYKHIPMSSLNQVDIVASFQTSYFISGIAPFGD
SLVILAYIPGEEDGEKDFSSTIPSRQGNAQRPEVRVVTWNNDELATDALPVHGFEHYKAK
DYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHINWLLQHGWHEKAL
EAVEANQGQSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQ
LPVLVPYIPTENPRLRDTAYEVALVALATNPSFHKDLLSTVKSWPPRIYSTMPVISAIEP
QINTSSMTDPLKEALAELFVIDGQHDKAFALYADLMKPDLFDFIEKHNLHDAVREKVVQL
MMIDCKRAVLLLIQQRDLISPSEVVSQLIAAKDKCDYRYFLHLYLHSLFEANLHAGKDYH
DMQVELYADYDPKMMLTFLRSSQHYTLEKAYEICVKKDLLKEQVFILGRMGNAKQALSVI
INSLGDIEEAIEFVSMQQDDELWEELIKQSFHKPEMVGVLLEHTVGNLDPLYIVNMLPNG
LEIPRLRDRLVKIVTDYRTETSLRHGCNDILKADCVNLLVKYYKEAKRAVCLSDEVDEAS
SHRGEKRASHLGERVMSMKSMEVKSKTRGGGRCCICFDPFSIQNVSIIAFFCCHAYHTTC
LMESTISIGGKKEAGAAAHGTVSYDEYDNGVRDDDDDEDKDEDEDASGAPRMRCILCTTA
AG
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtatcgtgatgtctcgaatgccatcggagaatggaatcgacggcgacgatgag
agagaagaagaagattctgaagaagattctggagaagaagaagaagaggaggagcatgag
ccgaggttgaagtatcagagaatgggcggtagtgtgccgtcgctactatcaactgatgct
gccacgtgtattgccgtcgccgaacgaatgatcgcccttggtacacacgctggagctgtt
cacattctagatttcctcggtaatcagattaaggagtttgctgctcacactgctgctgtg
aatgacctttgctttgacacagaaggggaatacgttggtagctgctctgatgatggctct
gttgtaataaatagtctttttactgatgagagaatgaaatttgattatcaccgaccaatg
aaggccattgctctagaccctgattatgcaagaaaatcttccagaagatttgttactggt
ggtttggcaggtcatttgtatttaaatgttaagaagtggctaggctatcgtgaccaggtt
ttgcactctggtgaaggtccaattcatgcggtgaagtggagaagtagcctcgtcgcctgg
gcaaatgatacaggagttaaagtctatgatgctgccaatgatcagcgtataacatttatt
gaaagacctcgtgggattcctcgacctgaactgctgctccctcatatagtttggcaggac
gacactcttttggtcattggttggggaacttctgtgaaaatcgcattgataagaacaact
caaagcaaaggcgtgaatgggacgtataagcatatacctatgtctagtctgaatcaggtg
gatatagtggcatcttttcaaaccagctatttcatttcaggaattgctccttttggtgat
tctttggttattctagcttatattccgggtgaagaagatggagagaaggacttcagcagc
actattccctccagacagggaaatgctcaaagaccagaagtgcgagttgtgacgtggaat
aatgatgagctcgcgacggacgctcttcctgttcacggttttgagcattacaaggccaaa
gactattcgctcgctcatgctccattctctggtagcagctatgcaggaggtcagtgggct
gctggtgatgaacccttatactatattgtatccccaaaggatgtcgttattgcaaaacca
agggatgcagaggatcacattaattggctactccagcatggatggcatgagaaagcttta
gaagctgttgaagccaatcagggtcagagtgaactacttgatgaggttggttctagatac
cttgatcatttgattgtcgaaagaaaatatgctgaagcggcatctttgtgtccaaagttg
ttgcgaggatcagcttccgcatgggaaagatgggttttccactttgcacatctccggcag
cttccagttttggttccatatatcccaactgaaaacccaagattacgtgatacggcttat
gaggtagctcttgttgctttggcaacaaatccatctttccacaaggatctcttatcaact
gtcaaatcttggccacctcgcatttattctacaatgcctgttatctccgctattgaacct
cagattaatacctcatctatgactgatccactcaaagaagcactagctgagttatttgta
attgatggacaacacgataaagcttttgctctttatgctgatcttatgaaaccggatcta
tttgacttcatcgaaaagcataatttgcatgatgctgttcgtgaaaaggtagtccaactt
atgatgatcgactgcaagcgtgcggtactgctgttaatccagcaacgtgacttaatatca
ccatctgaagtggtatcacagcttattgctgcaaaggataagtgtgattaccgatacttt
ttgcatctctatcttcattcactatttgaagcaaatctccatgctggaaaggattatcat
gacatgcaggttgagctgtatgctgactatgatcctaagatgatgcttacctttctaaga
agcagccagcattatacattggagaaggcttatgaaatctgtgtgaagaaagatttactg
aaagagcaggttttcatccttggaagaatggggaacgcaaagcaagccctttctgttatc
attaatagcttaggagatatagaagaggccatagaattcgtaagcatgcaacaagatgat
gaactctgggaagaactgataaagcaaagttttcataagcctgaaatggttggtgtactg
ttagagcatactgtaggaaatctcgatcccctttacattgtcaatatgttgccaaatggc
ctggagatacctcgtctgagggatcgtctggtcaagattgtgacagactacaggacagag
acttctcttagacatgggtgcaatgatatactcaaggctgattgcgtgaacttgttagtt
aaatattacaaagaagcgaagcgcgctgtttgcttgagtgatgaagtagatgaggcatct
tcccataggggtgagaagagggcttcacatctgggagagagagtaatgagcatgaaatcc
atggaggttaagtctaaaaccaggggaggtggaaggtgttgcatatgtttcgatccattt
tctatacagaatgtatcaatcattgccttcttttgttgccatgcctatcatacaacttgt
cttatggagtccaccatttccattggtggaaaaaaagaggcgggagctgctgcccatggg
actgtctcatatgatgaatatgataatggcgttcgcgatgatgatgatgatgaggataag
gacgaggacgaggatgcctcaggtgccccgcggatgcgttgtattttatgtaccacagct
gcaggttaa
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