Nicotiana tabacum (common tobacco): 107806820
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Entry
107806820 CDS
T04643
Symbol
rme-8
Name
(RefSeq) dnaJ homolog subfamily C GRV2-like
KO
K09533
DnaJ homolog subfamily C member 13
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nta03041
]
107806820 (rme-8)
03110 Chaperones and folding catalysts [BR:
nta03110
]
107806820 (rme-8)
Spliceosome [BR:
nta03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107806820 (rme-8)
Chaperones and folding catalysts [BR:
nta03110
]
Heat shock proteins
HSP40 / DNAJ
107806820 (rme-8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RME-8_N
GYF_2
DnaJ
Motif
Other DBs
NCBI-GeneID:
107806820
NCBI-ProteinID:
XP_016486551
UniProt:
A0A1S4BCL1
LinkDB
All DBs
Position
Un
AA seq
2462 aa
AA seq
DB search
MDFVSRHATDHHQPPTSESTTSSSSSAPPSSSHAHGSEEPEYLARYMVVKHSWRGRYKRI
FCISNFTLITLDPSTLSVTNSYDVGTDYDGAAPIIGRDDNSNEFTISVRTDGRGKFKAIK
FSSKYRASILTELHRIRWNKLGVVAEFPVLHLRRRTSEWVPFKLKITYIGVELIESKSGD
LRWCLDFRDMGSPSIILLSDPYGKKNTDSGGFFLCPLYGRKSKAFQAASGTTNAAIISNL
TKTATSMVGVGLTVDNSQAVTLSEYINRRAKEAVGADETPCGAWLVTRLRSAARGTLNTP
GVSMSIGPKGGLGEHGDAVSRQLILTKVSLVERRPENYEAVIVRPLSAVGALVRFAEEPQ
MFAIEFNDGCPIHVYASTSRDSLLAAVRDVLQTECQCPIPVLPRLTMPGHRIDPPCGRFH
LKFPASQQPVADLETATLHLKHLAVAAKDAVAEGGSIPGSRAKLWRRIREFNACIPYGGV
PSGIEVPEVTLMALITMLPAAPNLPPESPPLPPPSPKAAATVMGFIACLRRLLSSRSAAS
HVMSFPAAVGRIMGLFRNGSEGVAGETAGLVAVLIGGGPGETNMQTDTKGEWHATIMHTK
SVLFGQQSNLVVLVNRLRPVSVSPFLSMSIIEVLEAMVCEPHGETTQYTVFVELLRLVAG
LRRRLFALFGHPAESVRETVAVIMRTIAEEDAVAAESMRDAALRDGALLRHLLHALYLPA
GERREVSRQLVALWADSYQPALDLLSRVLPPGLVAYLHTRSNVVPVEGVTDRENSLLSRR
RKRLLHQRRIHPGKGITPQGHSLPSSTNYELSEQVPGSAVPFRTSDGYQRAAVDLVPGQV
PTMQSSAVNAGEYFQGELSAAAVPQTDQSSTIPALDSPSTNIHDVAESNVANAVDSDVSA
ISQDTGLPAPAQVVVEDAPVGCGRLLLNWPEFWRAFSLDHNRADLIWNERTRQELRESLQ
AEVHNLDVEKERTEDIVPGGANRNSITDQESAPQISWNYSEFSVRYPSLSKEVCVGQYYL
RLLLESGTSGRAQDFPLRDPVAFFRALYHRFLCDADTGLTVDGAIPDELGASDNWCDMGR
LDGFGGGGGSSVRELCARAMAIVYEQHYNTVGSFEGTAHITVLLDRTDDRALRHRLLLLL
KVLMKVLANVESCVLVGGCVLAVDLLTVVHEASERTTIPLQSNLIAASAFMEPLKEWMFL
DKDGAQAGPMEKDAIRRLWSKMEIDWTTRCWASGMPDWKKLRDIRELRWALAARVPVLTP
TQVGEVALSILHSMVAAHSDIDDAGEIVTPTPRVKRILSSPRCIPHIAQAMLSGEPSVVE
SAAALLKAIVTRNPKAMIKLYSTGAFYFALAYPGSNLLSIAQLFSVTHVHQAFHGGEEAA
VSSSLPLAKRSVLGGLLPESLLYVLERSGPAAFAAAMVSDSDTPEIIWTHKMRVENLIRQ
VLQHLGDFTQKLSQHCHSLYEYAPMPPVTYPELRDEMWCHRYYLRNLCDEVRFPNWPIVE
HIEFLQSLLVMWREELTRRPMDLSEEEACKILEISLDEVSRDDAPKRQSQETVNISKQIE
NIDEEKLKRQYRKLAMKYHPDKNPEGRERFLAVQKAYERLQATMQGLQGPQLWRLLLLLK
GQCILYRRYGDVLEPFKYAGYPMLLNAITLDKDDNNFLSSDRASLLVAASELIWLTCASS
SLNGEELVRDAGIQLLANLLSRCMCVVQPTTPSSELSTVIVTNVMRTFSVLSQFESARAD
MLEFSGLVDDIVHCTKLELVPAAVDAALQTIAHVSVSSEFQDALLKAGVLWYLLPLLFQY
DSTAEETDKSEAHGVGVSVQVAKNMHAVRTALALARLSGLGADENQTPYNMVAADALRAL
LTPKLASMLKDQSPKDLLFKLNSNLETPEIIWNTSTRAELLKFVDQQRASQDPNGSYDLK
DSHSFAYEALSKELFVGNVYLSVYNDQPDYETSEPEVFCVSLVDFISCLVRSDVAVGSDI
PSTTGTSDFQNDTTNGPYNEEQLSNDPSTPSDVKQMKNEEDELVKKLQFALIALQNLLTS
TPDLASVFSAKEKLLPVFECFSVPVTSTTIVPQLCLSVLSRLTTYAPCLEAIVSDGSSLL
LLLQMLHSSPSCREGALHVLYALASTPELAWAAAKHGGVVYILELLLPLQEVPLQQRAAA
ASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSIVEQTTETPELVWTPAM
AASLSAQIATMASELYREQMKGSVVDWDVPEQATGQQEMRDEPQVGGIYVRLFLKDPKFP
LRNPKRFLEGLLDQYLSSIAATHYDVQSVDPELPLLLSAALVSLLRVHPALADHVGFLGY
VPKLVSAVAYEGRRETMAIGEVKNTDHSKEAYEADDNSMQPPSPTLQERVRLSCLRVLHQ
LAASTTCAEAMAATSVGTPQVVPLLMKAIGWQGGSILALETLKRVVVAGNRARDALVAQG
LK
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtcagccgccacgccactgaccaccaccaacctccaacttctgaatccacc
acatcctcctcctcttctgctccaccctcctcctctcatgcccatggctccgaagagccc
gagtacttggcccgttacatggttgtcaaacactcctggcgaggtcgatacaaaaggatt
ttttgcatttcaaatttcactttgattacactggatcccagtacattatcagtcactaac
tcatacgatgttgggactgattatgatggtgcggcccctattattgggagagatgacaat
tcaaatgagtttaccataagtgtgaggactgatggccgcgggaagttcaaggctatcaag
ttctcttccaagtatagagcaagcattttgactgaattgcatagaattaggtggaataag
cttggagtggttgcagagttccctgttttgcatctaaggaggaggacttctgagtgggtt
ccttttaagttgaaaattacttatataggagttgagcttattgaatcaaaatctggagat
cttcgttggtgcttggactttagagacatgggctctccttccattatccttctatctgac
ccttatgggaagaaaaatacagattccggaggtttttttctttgcccgctttatggaaga
aaatctaaagctttccaagctgcttcgggaactacaaacgctgccatcatatcaaatctg
actaaaactgcgacatccatggtgggtgtgggattaactgtcgacaattctcaagcagtg
accttatctgagtacataaataggagagcaaaagaggctgttggggcagatgaaactcct
tgtggtgcttggttagtaacaagattgcgctcagctgctcgggggactctgaatactcca
ggagtaagtatgtctattggcccaaaagggggccttggagaacatggcgatgcggtatct
cgtcaactcattctcactaaggtctcacttgtggaaagacgacctgagaattatgaagct
gttatcgtgcgtcctctatctgccgttggtgctcttgttcgatttgctgaggagccccaa
atgtttgctatcgagtttaatgatggatgcccaattcatgtctatgctagcacttctcgt
gatagcttacttgcagcagttcgtgatgtcttgcaaacagaatgccagtgtcccatcccg
gtgctaccaaggctaacaatgcctggtcatcgaattgatccgccatgtggcagatttcac
ttaaaatttcctgcttcacaacaacctgttgctgatttggaaactgcaactctgcattta
aaacacttggcagtagccgctaaagatgctgtggccgagggaggatccattcctggatca
agagcaaaattatggcggcgaatacgagaatttaatgcatgtattccatatggtggagta
ccttctggtattgaagtacctgaggtgacactgatggctttgattacaatgcttccagct
gctcccaatctcccaccagagtcaccaccactgcccccgccgtctcctaaagctgctgct
acagtgatgggtttcattgcttgtttgcgtaggttgctttcatcaagaagtgctgcttct
catgtgatgtcttttcctgcagctgttggccgtataatgggtctatttagaaatgggtct
gaaggagtagctggtgaaaccgcaggccttgtggcggtacttattggtggtggtccaggg
gaaactaatatgcaaacagatacaaagggggaatggcatgcaacaataatgcataccaag
tctgtgctgtttggtcaacaaagtaatcttgtagttctggtaaatcggctaaggcctgta
tcagtatcgccatttttgtcaatgtctattattgaggttcttgaggcaatggtctgtgaa
ccacatggagaaacaacccagtatacagtgtttgtggagttattacgtctagtagctggc
ttgcgccgccggttgtttgcattgtttggacatcctgctgaaagtgtgcgagaaacagta
gctgtcattatgcgaacaattgctgaagaagatgcagttgcagcagaatcaatgcgtgac
gctgctttacgagatggtgcactactgcggcatttgttgcatgcactttaccttccagct
ggtgagcgacgtgaagttagcaggcaacttgtggctctttgggctgactcttatcaacct
gctcttgatctgttatctagagttttacctccaggacttgttgcttatctgcacaccaga
tccaatgtggttccagttgaaggtgtgactgaccgggaaaattcattgctgagtaggaga
cgtaaacgcttgcttcaccaaaggagaattcatcctgggaaagggatcacacctcaaggg
cattctttgccttcttctactaactatgaacttagtgagcaagttcctggaagtgctgtc
cctttcagaacttctgatggttatcagagagctgctgttgatttagttcctggacaggtt
ccaacaatgcaatcttcagctgtgaatgcaggtgaatacttccaaggtgagctgtctgct
gctgctgttcctcaaactgatcagtcgtcaaccattcctgctcttgacagtccttcgaca
aatatacatgacgtggctgaatcaaatgttgcaaatgctgtggattccgatgttagtgca
atttctcaggatacaggtcttccagctcctgcacaggtagtggtcgaagatgcacctgtt
ggatgtggaaggttgttattgaattggccagaattttggcgagctttcagtcttgaccat
aaccgtgctgacttgatttggaatgagcggaccaggcaggaattaagagagtcgttgcag
gctgaggttcataatctagatgttgaaaaagaacgcactgaagatattgttcctggcggt
gcaaacagaaactcaataactgaccaagagagtgcacctcaaatatcttggaactacagc
gagttttctgttagatatcctagcttatcaaaagaagtttgtgtaggccaatactatttg
cgtttacttcttgagagtggcaccagtgggagagcacaagattttcccctacgtgaccct
gttgcttttttcagagccctctatcaccggtttctatgtgatgctgacactgggcttact
gtcgatggtgctattcctgatgaattaggtgcttctgataattggtgtgatatgggaaga
ttagatggttttggaggagggggaggctcctcagtaagggagctctgtgcccgggccatg
gcaattgtttatgaacaacactacaacacagttggctcatttgaaggcacagcacacatt
acagttctcttggacaggaccgatgatagagctttacgacaccgtcttcttcttcttcta
aaggtcttgatgaaggttttggcaaatgtagagtcatgtgtcttggttggtggctgtgta
ctggctgttgatctactaacagtagttcatgaagcttcagaaagaacaactatacctctg
cagtcgaacttgattgctgcttctgcttttatggaaccattaaaggagtggatgtttctt
gacaaggatggtgcacaagctggaccaatggagaaggacgctattaggagactctggtca
aaaatggaaatagattggaccacaagatgttgggcttctgggatgccagactggaagaag
ttgcgagatattcgtgagcttaggtgggctttggctgcccgagttcctgttctcactcca
acccaggtaggagaagtagcattgagcatattacatagcatggttgcagcacactcggat
atagatgatgctggtgagattgttacgccaacacctagggtcaagcggatcttatcaagt
ccacgttgcattccgcatattgctcaggctatgctctctggagaaccgagtgttgtagaa
agtgctgctgctttgttgaaggccattgttactaggaacccaaaggcaatgataaaacta
tatagcactggagccttttactttgctctagcttatcctggttccaatctcctctcaatt
gctcagctgttctctgtgactcatgttcatcaagcatttcatggaggggaagaagccgct
gtctcctcttctttgcctttggcaaaacgcagtgttttgggtgggcttttacctgagtca
ttgctatatgttctggaacgtagcggtcctgctgcatttgcagcagcaatggtttctgat
tctgacactcctgagattatttggacgcacaagatgcgagttgaaaatcttattcgtcag
gtccttcagcatctaggtgattttacacagaagttgtcacaacattgccattctttgtat
gaatatgctccgatgccacctgtgacatacccagagctaagggatgagatgtggtgccac
cgttattaccttcgtaatttatgtgatgaagttcgctttcctaattggccaatagttgaa
cacattgaattcctgcaatcactgctggttatgtggcgagaagagttaactcggagaccc
atggatctttctgaagaagaggcttgcaaaatactggagatttccttggatgaggtatca
agagatgatgctcccaaaagacaatcacaggagacagttaatatttctaagcagattgag
aacattgatgaagaaaagctcaagcgacaatatcgaaaacttgcaatgaagtatcatcca
gacaaaaatcctgaggggagggagaggtttctggcagtgcagaaagcttatgaacggctg
caggctacaatgcaaggactgcaaggtccacaactttggagactattgcttttattgaaa
ggacaatgcattttgtatagacgatatggagatgtactggagccatttaaatatgctggt
tacccaatgttgttaaatgcaatcaccctggacaaagatgacaacaacttcctttcctct
gatcgagcatctcttcttgttgccgcatctgaattgatatggctaacgtgtgcatcttct
tcactgaatggtgaagaacttgtaagggatgccggaatacaacttcttgcaaatcttctg
tcccgttgcatgtgtgtagtacaaccaactactccttccagtgaactatcgactgtcatt
gtcacaaatgtgatgagaaccttttcagttttgagtcagtttgagagtgccagagctgac
atgcttgaattttctggcctagttgatgatattgtacattgtactaaacttgagcttgta
ccagctgctgttgatgctgcccttcagacaattgctcatgtttctgtgtcatctgaattt
caagatgctttacttaaggctggtgttttgtggtacctgttgccactgttgtttcagtat
gattctactgcagaagagacggataagtcagaagctcatggtgttggtgttagtgttcaa
gttgcaaagaatatgcatgctgtacggacagctctggctttggcaagacttagtggtttg
ggtgctgatgagaatcagacaccatataatatggttgctgctgatgcgcttagagctttg
ctgacaccaaagcttgccagtatgctgaaagatcaatctcccaaagacctattgttcaaa
ctaaattcgaacttggagaccccagagataatttggaatacgtcaacccgagcagaactc
ttaaagtttgttgaccagcagcgtgctagccaggatcccaatggttcatatgacctgaaa
gattctcattccttcgcatatgaagcattatctaaggaactttttgttggaaatgtatat
ttgagtgtgtacaatgaccaacctgattatgaaactagtgaacctgaggtcttctgtgtt
tcccttgttgattttatatcatgtctagtaaggagtgatgttgcagtgggatcagatatt
ccgtcaaccaccgggacatcagatttccaaaatgatacgactaatggaccatataatgaa
gagcagctgtctaatgatccttcaactccttcagatgtgaaacagatgaagaatgaggaa
gatgaattggttaagaaactccagtttgctctaattgcgctccagaatctcctgacgagc
accccagatttggcatcagttttttctgcaaaagaaaaattattaccagtttttgaatgc
ttctctgttcctgttacttcaacaaccattgttccccaactgtgtctgagtgtcctgtca
cgcttgacaacatatgctccgtgcttggaggcaattgtttctgatggatccagtctgctc
cttctattgcaaatgcttcactcctctcctagctgtcgtgaaggagctcttcatgttctg
tatgctttagctagcacaccagagcttgcatgggcagctgcgaagcatggtggagtagtt
tacattcttgaacttctcctgcctttgcaagaagtccctctgcagcaaagagcagcagct
gcctcgttgttgggaaagcttgttggacagccgatgcatggacctagagttgctataact
ctggctaggtttcttcctgatggcttggtatcggtcatcagggatggtcctggtgaagct
gttgtgagcattgttgaacaaacgacagagactccagaactcgtgtggactccagcaatg
gctgcttctttgtctgctcaaattgcaaccatggcatcagaactatatcgagaacagatg
aaaggcagtgttgtcgattgggatgtacctgagcaggcaactggccaacaggaaatgagg
gatgagccgcaggttggaggaatctatgttagactatttttaaaagatccaaaatttcct
cttagaaacccgaagcgatttttggaagggctactggatcaatatctttcatcaattgct
gcgacacattatgatgtccaatctgttgaccccgaacttcctctgcttctatctgctgct
ctggtgtccttattaagggtgcaccctgctcttgcagatcatgttggatttttaggatat
gtgccaaaacttgtgtctgcagtggcatatgaagggagaagagaaacaatggccatcggg
gaagtgaaaaatactgaccactccaaggaagcctatgaggctgacgataactcaatgcag
cccccttcaccaacactacaagagcgtgtgcgtcttagttgtttgcgtgttctgcatcaa
cttgcagcaagtacgacgtgcgctgaagctatggcagctactagtgttggtacaccccag
gttgttccccttttgatgaaagctatcggatggcaaggtggaagtattctagctcttgaa
acattaaaacgtgtagtcgttgctggaaaccgagctagggatgcgttggttgcgcaggga
cttaagtga
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integrated database retrieval system
