Nicotiana tabacum (common tobacco): 107822176 Help Entry 107822176         CDS       T04643                                  Name (RefSeq) THO complex subunit 2-like   KO K12879   THO complex subunit 2 Organism nta  Nicotiana tabacum (common tobacco) Pathway nta03013   Nucleocytoplasmic transport nta03040   Spliceosome Brite KEGG Orthology (KO) [BR:nta00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107822176   09122 Translation    03013 Nucleocytoplasmic transport     107822176  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nta03019]     107822176    03041 Spliceosome [BR:nta03041]     107822176 Messenger RNA biogenesis [BR:nta03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      107822176 Spliceosome [BR:nta03041]  Complex C   Other components    EJC/TREX     107822176  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     107822176 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 RVT_1 zf-RVT LIM_bind Motif Other DBs NCBI-GeneID:  107822176 NCBI-ProteinID:  XP_016504171 UniProt:  A0A1S4CSW1 LinkDB All DBs Position Un AA seq 2268 aa AA seqDB search DYRPISLIGSVYKITTKILAERLKKVIGKLVSNHQNAFIKHRQITDATLIANEVLDWRIK SGEPGVMCKLDIEKAFDQLNWSYLISILRKMGFGEKWIKWIRFSISTVKYSIIVNRGPVG FFSPQKGIRQGDPLSPFLFILAMEGLSKMLEKARQMQWIQGFRVGLNAENTVKVSHLLYA DNTLIFCEAERSQILYLNLTLLLFEALSGLHVNKLKSIIYPVNNVPNLEELSSIMGCAIG ALPTTYLGLPLGAKFKSCEVWNGVIEKFEKRLASWQMQYLSMGGRLTLINSVLDSIPTYH MSLFPIPKKIALDKDSSIAQNRTGNIWDVHLRRSIQDWEMDSLMDMLARVEVFTIDENLP DTMKWGNKGIFTVKECYKHICTQNQDNLNRRGFQLVNRCYMCKESSENVSHLLLHCPVAT DVWNMFFCLFGLNWVIPSHIREAYTSWSLWEVDKAIKEIWLMIPAVICGSLWNERNQRCF DGISTPNNTLKANCLLTLFRWVKLTPAKWLVESALVPLRFFLELCEEEFLWESEMIKIKA ADLKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLSQMPEGSTQNASTATVGIIKSL IGHFDLDPNRVFDIVLECFEHQPGNTTFLDLIPIFPKSHASQILGFKFQYYQRLEVNDPV PSGLYQLTALLVKRDFIDVDSIYAHLLPKEEDAFDHYNAFSAKRLDEANRIGRINLAATG KDLMDEEKQGDVTVDLYAALDTETEAVAERSAELENSQPLGLLMGFLEVDDWYHAHVLFD RLSHLNPAEHIQTCNGLFRLIERSISEPYDLVHKMQLLGLLPGVVTDSMEVATSSSSRSF INLPKELFEMLSSVGPHLYRDTLLLQKVCRVLRGYYICAHQLVASGVSGFISQTVTIGDQ TPRIHLKDARSRIEEALGGCLLPSLQLIPANPAVGLEIWELMSLLPYEARYRLYGEWEKD DEQFPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYR DMITPVVDAFKYLTQLEYDILEYVVIERLAQSGREKLKDDGLNLCDWLQSLASFWGHLCK KYPSMELRGLFQYLVNQLKRGNGIELVFMQELIQQMANVHYTENMTEEQLDAMAGSDTLR YQATSFGITRNNKALIKSTNRLRDSLLAKDEPMLAIPLLLLIAQHRSVVVINAEAPYIKM VSEQFDRCHGALLQYVEFLSSAVTPTAAYALLVPALDELVHVYHLDPEVAFLIYRPVMRL FKCQRNSDVFWPSDSDEAVGPATAEKESESSDLSAYLLLDLGSSRKPILWTDLLDTIKTM LPSKAWNSLSPDLYATFWGLTLYDLHVPRSRYESEIAKQHAALKALEELSDNSSSAITKR KKDKERIQESLDRLSMELQRHEEHVTSVRRRLTREKDTWLSSCPDTLKINMEFLQRCIFP RCTFSMPDAVYCAVFVNTLHSLGTPFFNTVNHIDVLICKTIQPMICCCTEYEVGRLGRFL YETLKTAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLI QCLESTEYMEIRNALILLTKISNVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAA LASRKPSWVTDEEFGMGYLELKPAATPGSKSSTVNSVAIPNGSGPSISQVEPSVGRSVAA GRVVDGKLDRLESSMPKPDLGQVKLKCSQSVNGLDLQSMPSAALHSGTPSQRHVNEFMSR PLEENTIKAASKMSGEQEGRATGRRAAPAGSLSKQQKHDIEKDDKSGKAVGRATGATYVD VGHPSESRPSGNVNVSATVSGNGSLLSAVPKSAASLMRSLDLSSELKAELAATKSAELMF SAGKDDGNESSDLHKQSSSRLVHSPRQDASRVNEKVQKRSSPTEELDRLNKRRKGELDSR DIDGGDVRSSERERLIDARAADKLHAADYDKHGSDDQILNRASEKPLDRSKDKGSERHEK DHKERGDRPDKSRGDDTLSEKSRDRSTERHGRERSVERVQERGADRNFDRLSKDERIKDD RSKPRHSEASVEKSHTDDRFHNQNLPPPPPLPPHMVPQSINAGRRDEESDRRFGTARHSQ KLSPRHDERERRRSEENNALLQEDLKRRREEDFRDRKREERELPMKGEEREREREKASLV KEDLDPNASKRRKLKREHMASEPGEYSPATHPPVLSINMSQPYDGRDRGERKGVIVQQRP GYLDEPGLRLHGKESASKAPRRDVDPIYDREWDEDKRQRAEPKRRHRK NT seq 6808 nt NT seq  +upstreamnt  +downstreamnt agactataggccaattagtctcattggaagtgtttacaagattacaacaaagatactagc agaaaggctgaagaaggtaattgggaagctagtctccaaccatcagaatgccttcattaa acacagacaaataactgatgcaactctcattgctaatgaggtactagactggaggattaa aagcggtgaacctggggttatgtgcaaactagatatcgagaaggcctttgatcaacttaa ttggtcttaccttatctctattttaaggaagatgggatttggggaaaagtggatcaagtg gatcagatttagtatttcaacagtgaaatactcaattattgttaacagaggacctgtggg ttttttctctccgcaaaaagggataaggcagggagatccactctcacctttccttttcat cctagccatggagggactgagcaaaatgttggagaaggccagacaaatgcaatggattca gggtttcagagttggtttaaatgctgagaacactgtcaaagtatcacatctactgtatgc cgataatactttgatcttctgtgaggcagaaagatctcaaattctatacttgaatctgac tcttctgctatttgaggctttatcagggctacatgtcaacaagttgaaaagcatcatcta tccggtaaacaatgtgccaaacttagaggagttgtctagtatcatgggctgtgctattgg agcacttcctacgacctacctaggtctcccattgggggctaaattcaagagttgcgaggt atggaatggagtcattgagaaatttgagaagagattagcatcatggcagatgcaatacct atcaatgggtggtaggttaactctcataaatagtgtgctcgatagtatccctacatatca catgtctttgttccccattcccaaaaagattgcccttgataaggattcctccattgccca gaacagaactggcaatatttgggatgtgcacctcagaagatctatacaagattgggaaat ggacagcttgatggacatgttagccagagtggaggtcttcaccatcgatgagaatctacc cgacactatgaagtgggggaacaagggcatctttacagtgaaagaatgctataagcacat ttgtactcagaaccaggataatctcaatagaagaggcttccaactggtcaacagatgcta catgtgtaaggaaagctctgagaatgtcagtcacctgctcttgcattgcccagttgccac tgatgtgtggaacatgtttttttgtcttttcggcttgaactgggtcataccatcgcatat tagagaggcatacacaagctggagtctttgggaagttgataaggccatcaaggagatctg gttaatgattcctgcagttatttgtgggagtttgtggaatgaaaggaaccaaagatgctt tgatggaatctcaactccaaataacactcttaaagctaattgtttacttaccctttttag gtgggtgaagttaacccctgcaaaatggctcgtggaatctgctttggttcctttgagatt ttttctggagctatgtgaggaagagtttttgtgggaatctgagatgatcaagataaaggc tgcagatttgaagtcgaaagaggttagggtaaacactcgtcttctttatcagcaaacaaa gtttaaccttctccgggaagagagtgaaggctacgccaagctggtcacgctcctttctca aatgccagaggggtctacacaaaatgcttcaaccgctacagttggcataatcaagtcatt gattgggcacttcgatctggatccaaaccgagtctttgatattgttttggagtgttttga acatcagcctggtaatactacatttttggacttgattcccatatttcccaagtcccatgc ctcccagattctggggtttaagtttcaatactaccaacgactggaagtaaatgatcctgt tccaagtggtctttatcagctaacagccttgctggtgaaaagagacttcattgatgttga cagcatttatgcacatttacttcccaaggaggaggatgcttttgaccattacaatgcatt ttcagcgaagagacttgatgaggctaacagaatagggagaataaatcttgctgctactgg gaaggatctcatggatgaagagaaacaaggagatgtgacagtggatctgtatgctgcatt ggacacggaaacagaggcagttgctgagcgttccgcggagctagaaaatagtcaacccct gggcttgcttatgggatttcttgaagtggatgactggtatcatgctcatgtgttgtttga ccgtctctcacatcttaatccagcagagcatatacaaacatgcaatggattattcaggct cattgaaagatcaatatctgaaccgtatgaccttgttcataagatgcaacttttgggttt acttcctggagtcgtcactgactctatggaagtggcaacttcatccagcagtagatcttt tatcaatcttccaaaagagctttttgagatgctttcttctgttggacctcatctttatcg agatacattgttgctacagaaggtatgcagagtgttaagaggttattacatttgtgcaca tcagcttgtcgctagcggtgtgtcaggttttatctcccaaactgttacaattggagatca aactcctcgtatacacctgaaagatgctaggtcaagaattgaagaagcattaggaggatg cttgcttccttccttacagttgataccagcaaatcctgcagttggactggagatctggga actaatgagtctccttccatatgaggcacgctatcgtttatatggtgaatgggagaaaga tgatgagcaatttccaatgcttttggcggcaaggcaaacagcaaagttggacactaggag gatcctgaagcgccttgcaaaagaaaatctaaagcagctcggtcgaatggttgccaaact tgctcatgctaatccaatgacagtattgcgaacaatcgttcaccagattgaggcttacag ggatatgattacacctgttgtagacgcttttaagtatctgactcagctggagtatgatat tttggaatatgttgttattgaacggttggcacaaagtgggagagagaagctgaaagatga cggccttaatttgtgcgattggcttcagtctttggcatcattttggggtcacctgtgtaa aaagtacccgtcaatggaattgaggggcctttttcagtatcttgttaatcagttgaagag aggaaacggtattgagcttgttttcatgcaggagctcattcagcaaatggctaatgtaca ctatacagagaacatgacagaggaacaattggatgccatggctggaagcgatactctacg ctatcaggctacctcattcggaataacccggaataataaggcattgattaaatcgactaa caggctgagggattctttgctcgcaaaagatgaaccaatgttggcaattccactgttgct actcattgctcaacatcgttctgtggtagttattaatgccgaagctccatacattaaaat ggtcagtgaacagtttgataggtgtcatggagcccttcttcagtatgttgaatttttgtc tagtgcggtgactccaacagctgcctatgctcttctcgttccagctctggatgagcttgt acatgtgtatcatcttgatcccgaggtagcatttttgatttatcggcctgttatgaggct cttcaagtgtcagagaaattcagatgtcttttggccttcagatagtgatgaagcagtggg gccagcaactgctgaaaaggagtctgaaagctcagatttatctgcctacttactccttga tcttggttcttctcggaaacctattttatggacagatcttcttgataccatcaaaacaat gttgccttcaaaggcctggaatagcttatccccggacttgtatgccacattctggggtct tacactctatgatcttcatgttcctagatcccgttacgagtctgaaattgctaagcagca tgctgctcttaaagctctggaagaactttctgataattcgagttctgcaatcacaaaaag gaaaaaagataaagaaagaattcaagagtcactagatcggttaagtatggagctccagag gcatgaagaacatgttacatctgttcgtagacgactgactcgtgaaaaggatacatggct gagttcgtgtcctgatactttaaagatcaacatggagttccttcagcggtgtatatttcc acgctgtacgttcagtatgccagacgctgtgtattgcgccgtgtttgttaatactcttca ttcccttggaacacccttctttaacactgtgaaccacatagacgttttgatatgtaagac aatacaacccatgatttgttgttgcaccgagtatgaagtgggtcgactaggaagattttt gtatgagacattgaagactgcttactattggaagagtgacgaatcaatttatgaacgtga atgtggaaatatgcctggatttgccgtctattacagatatccaaacagccagcgtgttac atatggccaatttattaaggtgcactggaagtggagccaaaggatcacgaggttgctcat acagtgtctggaatcaactgagtacatggagatcagaaatgctcttattttattgacaaa gatctcgaatgtctttccagttactcggaagagtggaataaaccttgagaagagggttgc caaaattaaatctgatgaaagagaggatctcaaagtattggctacaggggttgctgcagc tctggcttctagaaagccatcatgggtgacagatgaagagtttggtatgggttacctaga actaaaacctgcggcaacacctggttctaaatcttcaactgttaattcagtagccatacc aaacgggagtggccctagtatttctcaagttgagccttctgttggaagaagtgtggcagc aggaagagtagttgatggcaagttggataggctggagagctctatgccaaaacctgactt aggtcaggtaaaactgaaatgtagtcaatcagttaatgggctggatttgcaatctatgcc atctgctgccctgcactctggtactccaagtcagagacatgtcaatgagtttatgagtag accattggaagagaataccataaaagctgcttctaagatgtctggcgagcaggagggaag agctacaggtaggcgagctgctcctgctggatctctttcaaagcaacaaaagcatgatat tgaaaaggacgacaagtctgggaaagctgttggaagagcaactggagctacttatgttga tgttggtcatccttctgaaagcagaccaagtgggaatgtcaatgtttctgctacagtttc aggaaatggtagcttgttgtctgctgtacctaaaagtgcagcttcattaatgagatcgct agatctttcaagtgaattgaaagcagaacttgcagctaccaaatcagctgagctgatgtt ttctgctggaaaagatgatggcaatgaaagctctgatctgcataagcagtcctcatcgcg tctggtccattcgcctcggcaggatgcttctagagttaatgaaaaagtacagaagagatc tagccccacggaagagcttgatagactgaataaacgccggaaaggtgaacttgacagtag agatattgatggtggtgatgttcgttcatctgagagagagcggttaatagatgcacgagc tgctgataaacttcatgcagcagattatgataaacatggatctgatgatcaaatattgaa ccgggcctcggagaagcctcttgatagatccaaagataagggtagtgaaagacatgagaa agaccacaaagaaagaggggaccgtcctgacaagtctcgtggggatgatacgttgtctga aaaatcaagagataggtcgacagagcggcatggaagagaacgttctgttgaaagagtaca ggagagaggtgctgataggaacttcgataggttaagtaaggatgaaagaatcaaagatga taggagcaagccgcgacatagtgaagcgtctgtagagaaatctcatacggatgatcggtt tcacaatcaaaatttgcctccacctccaccacttccgcctcacatggtcccccaatccat taatgcaggcagaagagatgaagaatctgatagacgttttggaacagccaggcatagtca aaaactttctccaaggcatgatgagagagagagacgacgatcagaagagaataatgcatt attgcaggaagatttgaagcgaaggagagaagaagattttcgagatagaaagcgggaaga aagagaacttccaatgaagggagaggagagggaaagagagagggagaaagcaagcctcgt gaaggaggatttggatccaaatgcctcaaagaggcgcaaacttaagagagagcatatggc ttcagaacctggcgagtattcacccgctactcatcctcctgtcctttctattaatatgtc acagccctatgatggaagagataggggagagcggaagggtgtcattgttcagcagcgtcc aggttacttggacgagcctggtcttaggcttcacggaaaagaaagtgccagcaaagcacc tcgtcgtgatgttgaccctatatatgatagagaatgggatgaggacaagaggcaaagagc tgagcccaagaggcggcatcgcaagtaa

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