Neurospora tetrasperma: NEUTE1DRAFT41251
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Entry
NEUTE1DRAFT41251 CDS
T03451
Symbol
NEUTE1DRAFT_41251
Name
(RefSeq) hypothetical protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
nte
Neurospora tetrasperma
Pathway
nte03030
DNA replication
nte03410
Base excision repair
nte03420
Nucleotide excision repair
nte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
03410 Base excision repair
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
03420 Nucleotide excision repair
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
03430 Mismatch repair
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nte03032
]
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
03400 DNA repair and recombination proteins [BR:
nte03400
]
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
Enzymes [BR:
nte01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
6.5.1.6 DNA ligase (ATP or NAD+)
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
DNA replication proteins [BR:
nte03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
DNA repair and recombination proteins [BR:
nte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
NER (nucleotide excision repair)
Other NER factors
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
MMR (mismatch excision repair)
Other MMR factors
NEUTE1DRAFT41251 (NEUTE1DRAFT_41251)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
MctB
Motif
Other DBs
NCBI-GeneID:
20827781
NCBI-ProteinID:
XP_009850238
JGI:
Neute_matA2_41251
UniProt:
F8ML59
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MKIKDKSPAKTGRGRGRPAKGKEVAKEVAKEESKADVAKEKSSAEEDEDVMEVVEEEVSS
ASASEIEAEEEEEDEDEKTEAVAKEARKVIQTTLATKVKDPYPDWKAGEPVPYAALCTTF
SLIEQTRKRLLIMEYCSLFLRQVLRLTPDDLLPTVLLMINKLAPDYAGIELGIGESLIMK
AIGETTGRSIAVVKNDQKEIGDLGLVAVKSRSKQPTMFKPKPLTIRGVHKGLMDIATTMT
GTGAQQKKVDGIKKLLSAADANSTGKVDITKEKGGPSEAKFIVRFLEGKLRLGLAEKSVI
VSLAQAMIAHEFAQKGKIPSESDFSKAESILKTVYSELPSYDVIIPAMLQHGIMNLREHC
KLRPGVPLKPMLANPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVAKDAPKSEGDLSQ
VASKDTGKGVAAIFSRNSEDLSQKYPDVLAKLPTWVKEGTKSFVLDCESVAWDTVDHKLL
PFQQLMTRKKKDVKLEDVKVKVCVFAFDLLYLNGQAVVEKSLRERRELLREAFKPVEGEF
AFATSMDGQELDEIQTFLDESVKAGCEGLMVKMLDGAESGYEPSKRSRNWLKIKKDYLAG
IGDSLDLVVLGAYHGKGKRTSVFGAFLLACYNPSTDTYETVCNIGTGFSDEVLQELHSSL
SPIIIDRPKPFYAHSSGGQHQPDVWFEPKYVWEVKTADLTLSPRYKAGMKEGVDPSGEKG
ISLRFPRFIKVRDDKKPDEATTSRMVAEMYRKQESVGKNKGPAVDDNFEY
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaggataagagtcctgccaagacggggagggggaggggaaggccggctaag
gggaaggaagttgctaaggaggtagctaaggaggaaagcaaggcggatgtggctaaggag
aaaagcagcgcagaggaggacgaggatgtgatggaggtcgtggaggaggaggtatcctca
gcatccgcatccgaaatcgaagccgaagaggaagaggaagacgaggacgaaaagaccgaa
gcagttgccaaagaggctcgcaaggtcatccagaccacactcgcaaccaaggtcaaggac
ccctacccagactggaaggccggcgagcctgttccttatgctgccctctgcacgacgttt
tcgctcattgagcagacgcggaagagactactcatcatggagtactgctctcttttcctg
cgccaagtcctccgtcttacgcccgacgatctgctgcctaccgttttgctcatgatcaat
aagcttgcgccggattatgcaggtatcgagctgggcattggcgagtcgctcatcatgaag
gctatcggcgagactacgggccgcagcatcgctgttgtcaagaacgatcagaaggagatt
ggagatctggggctggtggctgtcaagtcgaggtcgaagcagccgactatgttcaagccc
aagccgctgaccattcgcggtgtgcataagggtttgatggatatcgctacgacgatgacg
ggcacgggtgctcagcagaagaaggtggatggtatcaagaagcttttgtcggctgcggat
gcgaattccactggcaaggtggacatcaccaaggagaagggcgggccgagcgaggccaag
ttcatcgtccggttcctggagggtaagttgcggttgggactagcagagaagtccgtcatt
gtctccctggcgcaagccatgattgcacatgagttcgcgcaaaaggggaaaatccccagc
gaatccgactttagcaaagccgagtcgatcctcaagaccgtctacagcgagctgcccagc
tacgacgtcatcatccccgccatgctccagcatggcatcatgaacctccgcgagcactgc
aagcttcgcccgggcgtgccgctcaagcccatgctggctaacccgaccaaggccatcacc
gaggtgctcgatcgcttcgagggccagacgttcacgtgcgagtacaagtacgacggcgag
agagcgcagatccattacgtggccaaggacgcgcccaagagcgaaggcgacctcagccag
gtcgctagcaaggacactgggaaaggtgttgcggctattttttcacgcaactcggaggat
ttgtcacagaagtacccggatgtgctcgcgaagctgccgacctgggtcaaagaaggcacc
aagagttttgtgctggactgcgagtccgtggcgtgggacacggtcgaccacaagttgttg
ccgttccagcagctgatgacgcggaagaagaaggatgtcaagctggaggatgtcaaagtc
aaagtgtgcgtgtttgcgtttgacttgttgtatctgaacggccaggcggtggtggagaaa
agcctgagggaacggagggagttattgagggaggcgttcaagcctgtggagggcgagttt
gcgtttgcgaccagcatggatggccaggagctggatgagattcagacttttctggatgag
tccgtgaaggcgggttgtgaagggttgatggttaagatgttggatggcgcggagagtggg
tacgagccatctaaaaggagtcggaactggttgaagatcaaaaaagactacctagccggc
ataggcgactcgctcgacctcgtcgttcttggcgcctaccacggcaaaggcaagcgcacc
tccgtcttcggcgccttccttttagcctgctacaatcccagtaccgacacctacgaaaca
gtctgtaacatcggcaccggcttctccgatgaagttctacaggaactccactcttcctta
tcgcccatcatcatcgaccggcccaagcccttttacgcgcactcctcaggtgggcagcac
cagccggatgtctggttcgaaccgaaatacgtgtgggaggtcaagacggccgatctgacg
cttagcccgaggtataaggcgggcatgaaggaaggggtggacccgagtggtgagaagggc
atttctctcaggtttccgaggttcatcaaagtcagagatgataagaagccggatgaggcg
acgacgagtagaatggtggctgagatgtataggaagcaggagagcgtggggaagaataag
ggaccggctgttgatgataattttgagtattag
DBGET
integrated database retrieval system