Neurospora tetrasperma: NEUTE1DRAFT81451
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Entry
NEUTE1DRAFT81451 CDS
T03451
Symbol
NEUTE1DRAFT_81451
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
nte
Neurospora tetrasperma
Pathway
nte03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
NEUTE1DRAFT81451 (NEUTE1DRAFT_81451)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nte03400
]
NEUTE1DRAFT81451 (NEUTE1DRAFT_81451)
Enzymes [BR:
nte01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
NEUTE1DRAFT81451 (NEUTE1DRAFT_81451)
DNA repair and recombination proteins [BR:
nte03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
NEUTE1DRAFT81451 (NEUTE1DRAFT_81451)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
DNA_ligase_A_C
RNA_ligase
BRCT
DNA_ligase_IV
TSC22
FAM171A1-2-B_C
Motif
Other DBs
NCBI-GeneID:
20830407
NCBI-ProteinID:
XP_009850774
JGI:
Neute_matA2_81451
UniProt:
F8MM01
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MNTNRRSRSPDEEALEEDQHQYGAGTLSLEELDEQPRNHSKTFPFSDLFRTLFNPLIDCK
PSTSGGTVRGPKPGRGGHFSKVSYHEQRRHIIERFMSRWRSEVGNDFYPAMRLILSDKDR
DRGVYGLKENTIGKLLVKVMKIDRNSEDGYNLMHWKLPGSQSGVSRSVGDFAGRCFEVVS
KRAMRAQPGELTIADVNVLLDRLAAASGEAEQLPIFEEFYRQMNAEEMMWLVRIILKDMR
VGATERTFLNLWHPDAEALFSVSSSLRRVCWELFDPEFRLEQQETGIKLMQCFQPQLAQF
QMTTTWEKLVKNLGVTEENPEFWIEEKLDGERMQMHMIEDDTVPGGFRFAFWSRKAKDYT
YLYGESLEDEQSALTRHLHKAFDDGVRNLILDGEMITWDIDIDKMVPFGTLKTAALEQQK
NPSKAGPRPLYRVFDILLLNDKPLTEYTLNDRRRALERAVVGVHRRLEILPFERATSPDA
IEPLLRRVVAEASEGLVLKNPRSRYSLNSRNNDWIKVKPEYMSDFGESLDCVVVGGYFGS
GRRGGTLSSFLCGVRVSQNFIKSGNASAEKCLSFVKVGGGFKAEDYAEIRHHTEGKWQDW
DPSSPPTEYIELGGGEKLQYEKPDVWIRPSDSVVISVKAASITQSDQFAMGWTLRFPRFR
KLRLDRAWDSALDMDEFEVLRSKIKDQEQERKKMEMENRKRKPATKRARKDLVIAGMSDP
SSSSAATPVIAPRETREASERLFEGLDFCVLSDSLKPNKMAKPALEKLIKDHGGRIHQQV
VDHSGQGKIIIPIADKNVIKVASLRKANPEMDIVRPKWIFDCLVQPILFTKQKENKKGYL
LLFEPTHLFHSGSEETSEEAEQAVDRYGDSYAGDLADINELKAIMEGMESDDYVSDSDWD
SDPGRGRGRGDGFDMDHFLDHLEEQGTSLDELRSFMFRRCRVFFALPSAGNGDGAAESKA
SRLKNYIRFGNGKVVDELETATHVVVVTAPSGESSKKEGREMAAEIRYKISLREMGSPMP
RIVKGEWVEDSWKEATVVDEEEYVAG
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaataccaacaggcgatccagatcaccagatgaggaggcattggaagaggaccaacat
cagtacggggcaggtactctaagcctagaagaactcgatgagcaaccacgaaaccactcc
aaaaccttcccattctctgacctctttcggaccctcttcaaccctctcattgactgcaaa
ccctcaacctctgggggtacggtgcgcggccccaaaccaggacgaggcggccacttctcc
aaggtctcctaccatgaacagcgccggcacatcatcgagcgcttcatgtcgcgctggcgg
tccgaagttggcaacgatttttacccggccatgcgcctcatcctctccgacaaggaccgc
gaccgcggcgtgtatgggttgaaggagaacaccatcggcaagctgctggtcaaagtcatg
aagattgatcggaactcggaggatgggtataacctcatgcactggaagcttccggggagc
cagagtggggtaagccggtctgtaggggactttgcggggcgctgttttgaagtggtcagc
aagcgcgcgatgcgtgctcagccgggggaattgacgattgcggatgttaatgtcctgttg
gatcgcttggcggcggcaagcggggaggccgagcagttaccgatctttgaggagttttat
cggcagatgaatgcggaggagatgatgtggttggtgaggatcatattgaaggatatgagg
gtgggcgccacggaaaggacgtttctgaacctgtggcatccggatgccgaggcgctgttt
agcgtttcgtcgagcttgcggagggtgtgttgggagctgtttgatccagagtttcggctg
gaacagcaggagacggggattaagctgatgcagtgctttcagccgcagctggcgcagttt
cagatgacaacgacgtgggagaagttggtgaagaatttgggggtgacggaggagaacccg
gagttctggatcgaggagaagttggatggcgagaggatgcagatgcatatgatagaggat
gatactgtgcccggaggatttcggtttgccttttggtcgagaaaggcgaaggattatact
tatctctatggtgagagcttggaagatgagcagtccgctctgacacggcatctgcacaag
gcctttgacgacggcgtgcggaatttgattctcgacggagagatgattacctgggatatc
gatatcgacaagatggtgccctttggaacgctcaagacggccgcgttggaacaacagaag
aacccttctaaggctggtcctcgcccgctctaccgtgtctttgatattttgctgctcaac
gacaaaccactcaccgaatacaccctcaacgaccggcggagagctctcgagcgtgccgtc
gtcggtgtccaccgccgcttggaaattcttcccttcgagcgagccacctccccagacgct
attgagccactcttgcgacgagtcgtggccgaagcatcggagggtcttgtcctcaagaac
ccacgctctcgctattcactcaacagccgtaacaatgactggatcaaggttaaaccggag
tacatgtccgactttggcgaatcgctcgactgcgtcgtggtgggcgggtactttggctcc
ggccggcgcggcggcacgctctcctccttcctctgcggtgtgcgcgtatcccagaacttc
atcaaaagcggcaacgccagcgccgagaagtgcctctccttcgtcaaagtaggcggcggt
ttcaaagcggaggactacgccgaaatccggcaccacaccgaaggcaaatggcaggactgg
gacccttccagtccaccaacggaatacatcgagctcggcggcggggaaaagttacagtac
gagaagccggacgtgtggatccgacccagcgactcggtcgtcatctcggtcaaggccgcc
agcatcacacaatcggaccagttcgccatgggctggacgctgcgatttccacgcttccgc
aaactgcggctggatcgcgcgtgggattcggcgctggacatggacgagtttgaagtttta
agatccaaaatcaaggaccaggaacaggaacggaagaagatggagatggagaaccgcaag
cggaaaccggcgaccaagcgagcgaggaaggacctagttattgcggggatgtctgatcct
tcgtcttcttctgctgctacacccgtcatcgccccgagagagacaagagaagcgagcgaa
cggttgtttgaaggcttggacttttgcgtcctttcggattctctgaaaccaaacaaaatg
gctaaaccggctttggagaaactaatcaaagatcacggtggtcgtattcaccagcaggtt
gtggaccactccggtcaggggaagattatcatccccatagcagacaagaacgtgatcaaa
gtggctagtctgagaaaggccaacccggagatggacatcgtccggcctaaatggatcttt
gattgtcttgtgcagccgattcttttcacgaaacaaaaggaaaacaagaagggttatctc
ctcctcttcgaacccacccacctcttccactccggcagcgaagagacgtcagaagaagcg
gaacaagcagtggatagatacggcgatagctacgccggggacttggcagacataaatgag
ttgaaggcgatcatggagggtatggagtctgatgattatgtgtccgattccgactgggat
tcggatcctggcagaggaagaggaagaggcgacggatttgacatggatcatttcctagat
cacttggaagagcaggggacttcgttggatgagctacggtcgttcatgttccggaggtgt
cgggttttctttgctttacccagtgctggcaacggagacggggcagcagaaagtaaagcc
tcaagattgaagaactatatacgatttgggaacgggaaggtagttgacgagctggagacg
gcgacgcatgtcgttgtcgtgactgctccttctggggagagttcaaagaaggaagggaga
gaaatggcggcggaaataaggtataaaatcagcttaagagagatgggaagtccgatgccg
aggatcgtcaagggggaatgggtggaggactcgtggaaggaggcgacggtggttgatgag
gaagagtatgtggctgggtga
DBGET
integrated database retrieval system
