Neobacillus thermocopriae: BTDUT50_12235
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Entry
BTDUT50_12235 CDS
T06692
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ntm
Neobacillus thermocopriae
Pathway
ntm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ntm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BTDUT50_12235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntm03400
]
BTDUT50_12235
Enzymes [BR:
ntm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BTDUT50_12235
DNA repair and recombination proteins [BR:
ntm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BTDUT50_12235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
AAA_22
UvrD_C
T2SSE
AAA_12
AAA_16
NTP_transf_4
AAA_28
DUF4926
nSTAND3
AAA
RsgA_GTPase
AAA_29
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
QAV27337
LinkDB
All DBs
Position
complement(2302916..2305270)
Genome browser
AA seq
784 aa
AA seq
DB search
MALQQQLDLDGRSFIKGVHVGTIFHNEDNLYSVIRVRVEETNEAHIEKDVVVTGYFPLLG
EYDTYTFFGTFKEHPRFGKQYVVDHFRKEFPETKEGVIQYLSGGMFKGIGKKTAAAIVET
LGERAISKILEDPDVLANVPKLTKAKAKQLYETLREHEGLEQIMIALSQFGFGPQLSMKI
YQVYKDETLQIIRTNPYQLVEDVEGIGFGRADDLGLQLGISGNHPDRIRAGCLYVIEQHC
MQEGHVYMTYEQLLTEVKQLLEAKRQEVVEVACISREMIHLSEEGKLIVEEDRFYIPSLY
FAEKGIVSNVKRLLEQKGMTTFSEAEFLLALGEWEEEANIQYSQKQKEAIQQALCSPLFI
LTGGPGTGKTTVINGIVHLFAKLHGLSLDPTSYDTDEPFPILLAAPTGRAAKRMTESTGL
PAMTIHRLLGWSGDGFQRGEDEPINGKLLIVDEMSMVDTWLANQLLKSVPSSMQVIFVGD
EDQLPSVGPGQVLKDLLRANVIPTVRLTDIYRQAEGSSIISLAHAIKDGNIPHDLTFPQK
DRSFIRCTGGQVVDVVKKVAENAKQKGYRAKDVQVLAPMYRGHAGIDRLNETLQQLFNPK
HDHKRELTFGDVVYRVGDKVLQLVNQPDENVFNGDIGEIVAIFYANENVEKQDLVVVSFD
GNEVTYPKQELNQITHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAITRSKRY
LILCGEEEAFQLGVMRTDDGTRQTTLYEKLTNTISPEQQLLPMEDANIGMEGVTPYDFME
NDVT
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgcaacaacagttagatttagacggacgatcgtttattaaaggcgtccatgtc
ggtaccatttttcataacgaagacaatttatattcagttattcgtgtacgcgtagaagaa
acaaatgaagcgcatatagaaaaagacgttgttgtgacaggctatttccctttgctcggt
gagtatgatacatatacgtttttcggcacatttaaagaacatccgcgctttggaaaacaa
tatgttgttgatcattttcgaaaagagtttcctgaaacgaaagaaggagtgattcaatat
ttatcgggcggcatgtttaaaggaatcggaaaaaaaacagcagccgcgatcgtagaaacg
ttaggtgagcgagcgatttcaaaaatattagaagatcccgatgtgcttgcgaacgtaccg
aagctaacaaaagcaaaagcaaagcagctgtatgagacgttgcgcgaacatgaaggatta
gaacaaattatgattgctttgtcgcaatttgggtttggacctcagttatcgatgaaaatt
tatcaagtgtacaaagatgaaacgttacaaatcattcgcacaaatccatatcaacttgtc
gaagacgttgaaggaattggatttggtcgcgctgatgatctcggcttgcagctcggtatt
tcgggcaatcatccggatcgcattcgggcaggttgtttatacgtcatagagcaacattgc
atgcaagaagggcatgtgtatatgacgtatgaacaactccttacagaagtgaaacaattg
ttagaggcgaaacggcaagaagtcgttgaagttgcttgcatttcccgtgaaatgatccat
ttatctgaagaagggaagttaattgtggaagaagatcgtttttacatcccttccttgtat
tttgcggaaaaaggtatcgtgtcaaacgtgaagcggctgcttgagcaaaagggcatgact
acgttttctgaagccgaatttttactagcgctcggtgaatgggaagaagaagcaaacatt
caatattcgcaaaaacaaaaagaggcgattcaacaagccctttgttccccgttgttcatt
ttaacaggcggaccagggacaggaaaaacgacggtcattaatggtattgttcatttgttc
gctaaattgcacgggctatcgcttgatccgacgagctatgatacggacgagccgtttccg
attttacttgctgctccaaccggccgtgcagcgaagcgcatgacggaatcgacaggtttg
ccggcgatgacgattcatcgtttgctcggctggagtggtgacgggtttcaacgtggggaa
gacgaaccgattaacggaaagttgttaattgtcgatgaaatgtccatggtcgatacgtgg
ctagcgaatcagttattaaagtctgttccatcatccatgcaagtcattttcgttggcgat
gaagaccaattaccgtccgtcggaccaggacaagtgctgaaagacttgcttcgcgcaaac
gtcattccgaccgttcgcttgacagacatttatcgccaggcagaaggttcgtcgatcatt
tcccttgcccatgcgattaaagatggaaacattcctcacgatttgacgtttccacaaaaa
gaccgttcatttattcgttgcacgggcggacaagtcgttgacgtcgtaaaaaaagtagct
gaaaacgcaaaacaaaaaggatatcgcgcaaaagacgttcaagtgctcgcaccgatgtat
cgcggtcatgcaggaattgatcgattaaacgaaacgttgcaacagctatttaatccaaaa
catgatcataaacgagagcttacgtttggtgatgtcgtttatcgcgtaggcgataaagtg
ttacagctagtcaatcagccggatgaaaatgtgtttaatggcgatatcggtgagatcgtt
gcgattttctatgccaacgaaaacgtagaaaaacaagatctcgttgtcgtttcgtttgat
ggaaacgaagtgacatacccaaaacaagaattgaatcaaattacgcacgcctactgttgt
tcgattcataaatcgcaaggaagcgaatttccgatcgtcattttgcctgttgtaaaaagt
tattatcgcatgttaaggcgcaatttattgtacacagccattacgcgcagtaaacgatat
ttaattttgtgcggtgaagaagaagcgttccagcttggggtcatgcgaacagatgacgga
acgagacaaacgacattgtacgaaaaattaacaaatactatttcgcctgagcaacagctg
cttccgatggaagatgcaaacatcggaatggaaggtgttaccccgtatgactttatggaa
aatgacgtaacataa
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