Neokomagataea tanensis: D5366_05305
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Entry
D5366_05305 CDS
T06079
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ntn
Neokomagataea tanensis
Pathway
ntn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ntn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5366_05305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ntn03019
]
D5366_05305
03009 Ribosome biogenesis [BR:
ntn03009
]
D5366_05305
Enzymes [BR:
ntn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D5366_05305
Messenger RNA biogenesis [BR:
ntn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5366_05305
Ribosome biogenesis [BR:
ntn03009
]
Prokaryotic type
rRNA helicases
D5366_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
QDH24742
UniProt:
A0A4Y6V3Q1
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All DBs
Position
1134470..1136296
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AA seq
608 aa
AA seq
DB search
MLSSDIHPALKRALEARGYEQLTPVQEAVLQPGLDERDLLVSAQTGSGKTVAFGIAIAPT
LLGEAERLAPSPQPMALVIAPTRELAIQVQNELEWLYADTGARISSCIGGTDARREAREL
NRGAHIVVGTPGRLCDHMSRGALDLSALRCVVLDEADEMLDMGFRDELEQLLDGAPAERR
TLLFSATIAREIASLAKRYQKNAARVDTVSGAKQHSDITYRAVVTAPQEIERSLVNVLRF
YESPTAMVFCNTRMMVGQVQAALLERGFASVAISGEMGQNERSRAIESLRSGQARVCVAT
DVAARGIDVPALGLVVHASIPTSAETLLHRSGRTGRAGRKGTSVLMVPFSQRRRAERLLA
LAKLNASWESVPTADAIAEQDAQRLLEDPILTAASGDTNDALVTKIAETHDAKALAAALV
GMYRARLPGVEALRPVSIEAPRRERTERGERGERAERAPREEMAGQWFRMSVGRTERADP
KWLIPLICRLGGVQKREIGSIRIDQEQTHFQIADESVDRFKSCLAGADADEVTIEPSDAP
QGGHYGARGRNPGEGKRFGKGGPRGGGAGGSGGGYKGRGGSGFSRSKSEGPRGGGRPTGD
GSSRRRRP
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcttccgatatccatcccgcactcaagcgcgctctagaagcgcgtggttacgaa
cagctgactcctgttcaggaagctgtcttacagccgggacttgatgagcgggatctgctg
gtttcggctcagacaggatcgggcaagacggttgcttttggcatcgcgatcgccccgact
ctgctgggcgaagctgagcgtcttgcaccatcccctcagccaatggctcttgttattgca
ccaacgcgtgaactcgcgattcaggtacaaaatgagcttgaatggctttacgctgataca
ggcgcacgcatttcaagctgcattggcggcaccgatgcccgccgtgaagcgcgcgagctt
aaccgcggcgcacatattgttgttggtacgccgggccgtctgtgcgaccacatgtcacgc
ggtgcacttgatctgagcgcgctgcgttgcgtcgtactcgacgaagccgacgaaatgctc
gacatgggcttccgtgacgagctggaacaacttttggacggtgcgcctgcagagcgccgc
acattgttgttctcagcaacgattgcgcgcgagattgcatctctcgcaaagcgttaccag
aagaatgcagctcgtgttgatacggtaagcggtgcaaagcagcacagcgacattacatac
cgtgcggttgtgacggctcctcaagaaatcgaacgttctttggtgaacgttctgcgtttc
tatgaaagcccaacagcaatggtgttctgtaacacccgtatgatggtcggtcaggttcag
gcagctctgcttgagcgtggtttcgcgtctgtcgccatttctggtgaaatgggtcagaac
gagcgtagccgtgcaattgagagcttgcgctcgggtcaagcgcgtgtttgcgtggcaacc
gacgttgctgcgcgtggcattgacgtgcctgcgctgggcttggttgtgcatgcgagcatc
ccgacatcagccgagactttgctgcaccgttcaggtcgtacaggtcgtgcgggccgtaag
ggcaccagcgtcctgatggttccgttcagccagcgccgccgtgcggagcgtctgttggct
ctggctaagttgaatgcgtcatgggaatctgtcccaacggcagacgctatcgcagagcaa
gatgcacaacgtttgttggaagacccgattttgaccgcggcttccggcgatacaaacgat
gcgctagttacaaagattgccgagacccacgatgccaaggctttggccgcggcattggtt
ggcatgtatcgtgcccgtctgccgggtgtagaagctcttcgccctgtatccattgaagca
cctcgccgtgagcgtaccgagcgcggtgaacgtggagagcgtgctgaacgcgcacctcgt
gaagaaatggccggccagtggtttcgtatgagcgttggccgtacagagcgtgctgacccg
aaatggctgatcccgttgatttgccgtttgggcggtgtgcagaagcgcgagatcggtagc
attcgtatcgaccaagagcaaacgcatttccagattgcggacgagagcgttgatcgcttc
aagtcttgcctggcaggtgcggatgcggatgaagtgacgatcgaaccttcagatgctccg
cagggtggccattatggtgcacgcggtcgtaacccaggcgaaggtaagcgctttggcaag
ggcggaccacgtggtggtggtgcaggcggcagcggtggtggctataaaggccgcggcggc
tcaggcttcagccgttcaaagtccgaaggtccacgcggtggcggccgtccaacaggcgac
ggatcaagtcgtcgtcgtcgtccataa
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