Nicotiana tomentosiformis: 104086494
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Entry
104086494 CDS
T05025
Name
(RefSeq) RNA pseudouridine synthase 5 isoform X1
Organism
nto
Nicotiana tomentosiformis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
Pyridoxal_deC
DUF5996
Motif
Other DBs
NCBI-GeneID:
104086494
NCBI-ProteinID:
XP_009589056
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MSKKAELAAPPSAAYFGEPWPEFNDGLTYHDMVRPIDAGLTLIEFYSRKYKSSAPLQGWL
QRIQNKQITVDSKVVTIPDTELSFWMSRAGTELVYHRLPWREPDAPYLLQVLFEDDYLIA
LNKPSGLQVLPGGLFQQRTVLTQLQWHVSKLTTSSSGCRKTHPVPVHRLGRGTSGILLCA
KTKLAKSRLAAYFAEGTSVVEDKYTNSECKKMRKISKIYRALVSGVIDMDEVLIKQPIGT
IKYPGVAKGLYVASPSGKPALSSVHVLERDLENNSTLVQVEIQSGRPHQIRIHLSFIGLP
LIGDPLYVSGGQPKCFDPELMDESFEKDGGYQRPENPVPGDCGYNLHAHQIVLIHPITNE
NRCVNMIARLFSVPLEEETAIGVGTVSSSEAIMLAGLAFKKKRQNKHKAEGKSCDKPIIV
TGANAHLLMFSTMERNYFFSI
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaagcagaactagctgcgccgccgtcagcggcgtacttcggagagccctgg
ccggaatttaatgacggattaacttaccatgacatggtccgacccattgatgctggtctt
acactgatcgaattctactccagaaagtacaaaagttctgctcctttacaaggttggttg
cagagaattcaaaataagcagataacagttgacagtaaagttgttactataccagatact
gaactcagtttttggatgagcagagctggtacagaactagtatatcatcgacttccttgg
agagaacctgatgcaccttacttgttacaagtactatttgaagatgactatttgattgct
ctaaataaaccttctggtttgcaagttcttcctggagggttgttccagcagcggactgtc
ttgacacaactccaatggcatgtgagcaagctgacaacctcttcatcgggttgtcgaaaa
acacatcctgttccagttcatcgcctaggaaggggtacatcaggaatacttctctgtgcg
aaaacaaagctcgctaaatctcgccttgcggcatattttgctgaggggacatcggttgtt
gaagacaaatacaccaactcagagtgcaagaaaatgaggaaaattagcaagatatatcgg
gcgcttgtaagtggtgtgattgatatggatgaggttctcatcaagcaaccgattgggacg
attaaatatcctggagttgctaaagggttgtatgttgcttctccttcagggaagccagct
ctgagcagtgttcacgttcttgaaagagatttagagaataacagcacattggtccaggtt
gaaattcaatctggaaggccacaccaaatccgtatccacctctctttcattggacttcca
ctaattggtgatcctctttatgtttctggcgggcaaccaaagtgctttgatcctgaatta
atggatgaaagttttgagaaagatggcggctatcaaagacctgagaatcctgttcctgga
gactgtggatataacctgcatgcacatcaaatagttcttatacacccaatcacaaatgag
aatcggtgcgtgaacatgatagcacgtttattcagcgtgccattggaagaggagacagca
attggagtgggaacagttagttcatcggaggccataatgttagcaggcctggctttcaag
aaaaaaaggcaaaacaaacacaaagctgagggcaaatcttgtgataagcccatcattgtc
actggtgccaatgctcatcttttgatgttttctacaatggaaagaaattacttcttttcc
atttag
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