Nicotiana tomentosiformis: 104102998
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Entry
104102998 CDS
T05025
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nto
Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nto03036
]
104102998
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nto00535
]
104102998
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104102998
Meiosis-specific proteins
Cohesin complex and associated proteins
104102998
Proteoglycans [BR:
nto00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104102998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
DOT1
AAA_29
Motif
Other DBs
NCBI-GeneID:
104102998
NCBI-ProteinID:
XP_018628618
LinkDB
All DBs
Position
Unknown
AA seq
1201 aa
AA seq
DB search
MYIKQVIIEGFKSYREQVATEDFSPKVNCVVGANGSGKSNFFHAIRFVVSDLFHNLRSEE
RQAFLHEGAGHQVLSAFVEIVFDNSDNRMPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VQNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLNELEQEKEELKKYQQLDKQRKSLEYTIFDKELHDARQKLN
EVEEARTKVAENSTEKYNSVLEAHEKSKELEKLSKDLTKEIQILSKEKEAVEKQRTEAIR
KRAKLDLDYKDLQEKMSTNIKAKDDAQKQLILLEREIQETKNALNDIKPLHERQVKEEED
ITRGIMDSEKKLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLSSNVTQERKLRDEI
DQLKKDMRDQDDIIKHRRVEVDKKEILISGYRNAYNQYKVERDKMHDERKSLWTQETELT
TEIERLKAEVVKAEKSLDHATPGDIRRGLNSVRRICREYEISGVFGPIFELLVCDEKFFT
AVEVTAGNSLFHVVVDNDETSTKIIRHLNAQKGGRVTFIPLNRVKAPHVNYPNSSDVIPL
VKKLTFSDVYEKAFKQVFARTVICKDLDVATRVARADGLDCITLEGDQVSKKGGMTGGFY
DYRRSKLRFMSTIKQNIVSINLKERELEEVRYKLQEIDQKINELVAEQQKNDAALAHDKS
ELEQLKQDIRNADRQRQSILKALQKKEKLLGNILSQIDQLRASIAMKQDEMGTDLVDHLT
PEERDSLSRLNPEITTLKEKLIACRANRIETETRKEELEMNLSTNLERRKQELVAMNSSV
DVDMLQGEVESKNQELKDAESLVDHVTEELTRVSGSIDERNKRLKKIKQDKDKLKALEDE
YQNTLQDEARELEQLLSKRNTYLAKQEEYSKKIRELGPLSSDAFETYKRRNVKELYKMLH
KCNEQLKQFSHVNKKALDQYVNFTEQREELQRRQAELDAGDEKIKELISVLDMRKDESIE
RTFKGVAKHFREVFSQLVQGGHGFLVMMKKKDGEDDDNDPDDDEPRADMEGRVEKYIGVK
VKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAVG
NMVRDLADRGSTQFITTTFRPELVKVADKIYGVIHKNRVSRVNVISRDDALDFIEHDQSH
N
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaaacaggtcatcatcgaagggtttaagagctaccgggaacaagtagccact
gaagattttagtcctaaagttaactgtgttgttggcgcgaatggatctggcaagtctaac
tttttccatgcaatccgttttgtcgtaagcgacctctttcataacctgcgcagtgaagaa
aggcaggcttttcttcatgaaggagcaggtcaccaagtattatctgcttttgtggaaatt
gtatttgataattcagacaatcgaatgccggttgataaagaggaagtacggctgcgaaga
acaattggtctcaagaaggatgagtatttcttggacggaaaacatatcacgaagacagag
gtccagaatttgctggaaagtgctgggttttctcgttctaatccctattatgttgtgcag
cagggaaagatagcatcattgacgttaatgaaggattcagaacgacttgatctgctgaag
gaaattggagggacacgtgtttatgaggagaggcgtcgagaaagtttaaaaatcatgcag
gaaactggtaacaagagaaagcaaataattcaagttgtacaatacttggacgagagattg
aacgagcttgaacaagagaaggaggaactgaaaaaatatcaacagcttgacaagcagcgt
aaatctctggaatacacaatttttgacaaagaacttcatgacgcacgccagaaattgaat
gaggtagaagaggctcggaccaaagttgctgagaactctactgagaagtataatagtgtc
ctggaggctcatgaaaagtccaaggagctggagaagttgtccaaagatctgacaaaagaa
attcaaattttaagcaaggagaaagaagctgtagagaaacagcggacagaggctatcaga
aagcgagctaagcttgatcttgattacaaagaccttcaagagaagatgtctacaaatatt
aaagctaaagatgatgcgcagaaacaacttatacttctggaaagagaaattcaggaaaca
aagaatgcactcaatgatatcaagcctttgcatgagagacaagtaaaagaggaggaggac
atcacgagggggattatggatagtgaaaagaaacttagcattctttaccagaaacaaggc
cgtgccacccaatttgcgagcaaagctgccagggacaaatggctccagaaggaaattgat
gaatatgaacgagttttatcttcaaacgtaacacaggagagaaagcttagagatgaaatt
gatcagctcaaaaaagacatgagagatcaagatgatataatcaagcatcgtagagttgaa
gtggacaaaaaagaaatcctcatatctggctatcgaaatgcttataatcagtataaagtg
gagagagacaagatgcatgatgagaggaagtctttgtggacacaggaaaccgagctcact
actgaaattgaacggctcaaggctgaagttgtgaaggcagaaaaaagcctagatcatgca
actcctggcgatatcagaaggggtctgaactctgtgaggaggatatgcagagagtatgaa
atttctggagtatttggcccgatttttgagttgcttgtatgtgatgaaaagttttttaca
gctgttgaagttactgctggaaacagcttattccatgtggtggttgataatgatgaaaca
tcaactaaaattattagacacctcaatgcacaaaaaggtggacgagttacatttattcca
ttgaacagggttaaggctccacatgttaattatccaaatagttctgatgtgattccgctt
gtgaagaaattgacgttttctgatgtatatgaaaaagcatttaagcaggtgtttgcaaga
accgtaatttgtaaagatctggatgttgctaccagggttgctcgtgctgatgggcttgac
tgcattactctggaaggtgaccaagttagtaaaaaggggggaatgaccggtggattttat
gactatagacgctcaaaattgaggtttatgagcaccatcaaacagaatatagtgtccatc
aacctgaaggagcgtgaacttgaggaagttagatataaacttcaagagatagaccagaaa
attaatgaacttgtggctgagcagcagaaaaatgatgctgccctggctcatgacaagtct
gagttagaacagcttaaacaagatatccgtaatgctgacagacagagacaatccatctta
aaagctcttcaaaagaaggagaaactgcttggtaatattttgagtcaaatagatcagcta
agagctagtatagctatgaaacaagatgaaatgggaacagatcttgttgatcatttaaca
ccagaagagcgagattctttgtcacgcttgaaccctgaaattacgactctgaaggagaag
ctgattgcgtgcagggcaaatcggatagagactgaaactagaaaagaggagcttgagatg
aatctgtcaacaaatcttgaaagacgaaaacaagagttagtggcgatgaattcttctgtc
gacgttgatatgctacagggtgaagttgagagcaagaatcaggaacttaaggatgcagag
tcactagttgaccatgtgactgaagagcttacaagggtttctggaagtatagatgaacga
aacaagaggctcaagaagatcaaacaggacaaggataagctgaaggctcttgaagatgag
tatcagaatacacttcaggatgaagcaagagaattggagcagctactaagtaaacggaac
acctatcttgccaagcaagaagagtactcgaagaaaattcgggaactgggtcctttatct
tctgatgcctttgagacgtacaaaagaaggaatgtaaaagaattatataagatgctgcac
aagtgtaacgagcagctgaaacaattcagccatgtaaacaaaaaagcacttgatcaatat
gtaaatttcaccgagcaaagagaagaactccaaagaaggcaagctgaattagatgctggt
gatgagaaaatcaaggaacttatatcagttttggatatgaggaaggatgaatcaattgag
cgcacgttcaagggcgtggctaaacatttccgcgaagtattctctcaactcgtgcaagga
ggtcatgggttcttagttatgatgaagaaaaaggatggtgaggatgatgacaatgatcct
gatgatgatgagcctcgtgctgatatggagggaagggttgagaaatatattggtgtgaaa
gtgaaggtgtcgttcactggacaaggagaaacacagtcaatgaaacagttatcagggggt
cagaaaactgtggtagcgctggcacttatatttgccatacaaagatgtgatcctgcccca
ttttatctttttgatgagatagatgcagcactagatccccagtacagaacagctgtgggc
aatatggttcgcgatttggcagacaggggcagcacccaatttattacgacgacgttccgg
ccggagcttgtgaaagtggctgataagatatatggtgtgatacacaaaaatagagttagc
cgtgtcaacgtcatctcgagggacgatgccttagattttattgagcatgatcaatctcat
aactga
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integrated database retrieval system
