KEGG   Nicotiana tomentosiformis: 104117077
Entry
104117077         CDS       T05025                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    104117077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nto04121]
    104117077
   03036 Chromosome and associated proteins [BR:nto03036]
    104117077
Enzymes [BR:nto01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104117077
Ubiquitin system [BR:nto04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    104117077
Chromosome and associated proteins [BR:nto03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     104117077
    Noncanonical PRC1 (PRC1.1)
     104117077
    Noncanonical PRC1 (PRC1.3/1.5)
     104117077
    Noncanonical PRC1 (PRC1.6)
     104117077
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-RING_UBOX zf-RING_4 zf-rbx1 zf-RING_11 zf-RING_6 zf-RING_10 zf-C3HC4_4 zf-C3HC4_5 Prok-RING_4
Other DBs
NCBI-GeneID: 104117077
NCBI-ProteinID: XP_009626353
LinkDB
Position
Unknown
AA seq 508 aa
MPAQKRYLSNYQDDNNNNEDDDENSPQHQHSRRKQSRRVAGEQTRANMEEQQVDEQDEEE
DDQAQAQAQDNDDEDDDDQEEINQSSEDDSEGSGTDPEAFDELIAVSRSEIRTNDFDERS
FFAQLFQVRKDVECSICLGIIKRTRVVMGCQHRFCRECIDKSMRLGNNECPACRIHCASR
RSLRDDPGFDTLIEAIYPDVEKYEEEELVFLEEERALNEQIQASIAQISQRQSEALIKRR
KVGKDIAASSAQRTPRNYHNAYSRRRRNSQGAEPERSDPNESENDDHDRNKDSPAKDERG
TQTKFRKRRRRKGAPATPTSPSAASPDGGHIETAAELPRETVGSSPGPALKPETLTWGRG
GARSHSRHGSASSSRNARNTRISKLIDYLESVRTNDGELNIHLELIPLDKQTTPSLKKPH
LCCRPSTSVEHLYEFVAQETKSQAKDVELLAIKDNTTVNHSTLMDASNMLARVVRGSDVT
LQSLERRETCPLNKNLILAYVQKNSADM
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgccagcccagaaacgctatttgtcgaattatcaagatgacaataacaacaacgaagac
gatgatgagaactccccccagcatcagcacagccggcggaaacaatcccgacgtgttgcc
ggcgaacaaacacgagctaatatggaagagcaacaagtagatgagcaggatgaagaggaa
gatgaccaagcccaagcccaagcccaagataatgatgatgaggatgatgatgatcaagag
gaaattaatcaatcgtctgaagatgattctgagggaagtggcactgaccctgaagccttt
gatgaattgatcgctgtgtcacgatctgagattcgcaccaatgatttcgacgagagaagt
tttttcgcacaattatttcaagttcgtaaagatgtagaatgttcaatatgtctaggtatt
atcaagagaactcgggttgtgatgggatgccaacaccgtttttgcagagaatgcatagat
aaatcaatgagactggggaataatgaatgccctgcatgccgcatacattgtgctagccga
cggtcattgagagatgatcctggatttgataccttaattgaggcaatatatccagatgtt
gagaagtacgaagaggaggagcttgtctttcttgaagaggaacgtgcactcaatgagcag
attcaagcatccattgcccaaatttctcaacgtcaatctgaagcactaattaagaggcgc
aaagttggtaaagacatagctgcttcctctgcacaaagaacacctcgcaactatcacaat
gcttattcgagaagaagaagaaacagtcagggggctgaacctgagcgatctgatccaaat
gagagtgaaaatgatgatcatgacaggaacaaagattcacccgccaaggatgagcgtgga
acacaaaccaagttcaggaagcgccggaggcgcaaaggagctccggccaccccgacttct
ccttcagctgcaagtccagacggtggacacattgaaaccgcagcagaactacccagagaa
acagtaggcagttctcctggacctgcattgaagcctgaaacacttacttggggaagaggt
ggtgctcgaagtcacagtcgacacggcagtgccagcagtagcagaaatgctcgtaacact
cgaatatctaagttgattgattatcttgaaagtgtccgaacaaatgatggtgagttaaat
atccatcttgagcttattccattggacaaacaaacaacaccaagtctgaaaaagccccat
ctctgctgcaggccaagtacatcagttgaacacctctatgaatttgttgctcaggagaca
aaatcacaagcaaaagatgttgaattactggcaataaaggacaataccactgttaaccat
tcaaccttaatggatgcatcaaatatgctagcccgagttgtcagggggtccgatgttact
ctgcaaagcttggaaaggcgagaaacttgcccattaaataagaatctgatccttgcttac
gtgcaaaagaattcagccgatatgtga

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