Nicotiana tomentosiformis: 104117077
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Entry
104117077 CDS
T05025
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104117077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nto04121
]
104117077
03036 Chromosome and associated proteins [BR:
nto03036
]
104117077
Enzymes [BR:
nto01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104117077
Ubiquitin system [BR:
nto04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104117077
Chromosome and associated proteins [BR:
nto03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
104117077
Noncanonical PRC1 (PRC1.1)
104117077
Noncanonical PRC1 (PRC1.3/1.5)
104117077
Noncanonical PRC1 (PRC1.6)
104117077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-rbx1
zf-RING_11
zf-RING_6
zf-RING_10
zf-C3HC4_4
zf-C3HC4_5
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
104117077
NCBI-ProteinID:
XP_009626353
LinkDB
All DBs
Position
Unknown
AA seq
508 aa
AA seq
DB search
MPAQKRYLSNYQDDNNNNEDDDENSPQHQHSRRKQSRRVAGEQTRANMEEQQVDEQDEEE
DDQAQAQAQDNDDEDDDDQEEINQSSEDDSEGSGTDPEAFDELIAVSRSEIRTNDFDERS
FFAQLFQVRKDVECSICLGIIKRTRVVMGCQHRFCRECIDKSMRLGNNECPACRIHCASR
RSLRDDPGFDTLIEAIYPDVEKYEEEELVFLEEERALNEQIQASIAQISQRQSEALIKRR
KVGKDIAASSAQRTPRNYHNAYSRRRRNSQGAEPERSDPNESENDDHDRNKDSPAKDERG
TQTKFRKRRRRKGAPATPTSPSAASPDGGHIETAAELPRETVGSSPGPALKPETLTWGRG
GARSHSRHGSASSSRNARNTRISKLIDYLESVRTNDGELNIHLELIPLDKQTTPSLKKPH
LCCRPSTSVEHLYEFVAQETKSQAKDVELLAIKDNTTVNHSTLMDASNMLARVVRGSDVT
LQSLERRETCPLNKNLILAYVQKNSADM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccagaaacgctatttgtcgaattatcaagatgacaataacaacaacgaagac
gatgatgagaactccccccagcatcagcacagccggcggaaacaatcccgacgtgttgcc
ggcgaacaaacacgagctaatatggaagagcaacaagtagatgagcaggatgaagaggaa
gatgaccaagcccaagcccaagcccaagataatgatgatgaggatgatgatgatcaagag
gaaattaatcaatcgtctgaagatgattctgagggaagtggcactgaccctgaagccttt
gatgaattgatcgctgtgtcacgatctgagattcgcaccaatgatttcgacgagagaagt
tttttcgcacaattatttcaagttcgtaaagatgtagaatgttcaatatgtctaggtatt
atcaagagaactcgggttgtgatgggatgccaacaccgtttttgcagagaatgcatagat
aaatcaatgagactggggaataatgaatgccctgcatgccgcatacattgtgctagccga
cggtcattgagagatgatcctggatttgataccttaattgaggcaatatatccagatgtt
gagaagtacgaagaggaggagcttgtctttcttgaagaggaacgtgcactcaatgagcag
attcaagcatccattgcccaaatttctcaacgtcaatctgaagcactaattaagaggcgc
aaagttggtaaagacatagctgcttcctctgcacaaagaacacctcgcaactatcacaat
gcttattcgagaagaagaagaaacagtcagggggctgaacctgagcgatctgatccaaat
gagagtgaaaatgatgatcatgacaggaacaaagattcacccgccaaggatgagcgtgga
acacaaaccaagttcaggaagcgccggaggcgcaaaggagctccggccaccccgacttct
ccttcagctgcaagtccagacggtggacacattgaaaccgcagcagaactacccagagaa
acagtaggcagttctcctggacctgcattgaagcctgaaacacttacttggggaagaggt
ggtgctcgaagtcacagtcgacacggcagtgccagcagtagcagaaatgctcgtaacact
cgaatatctaagttgattgattatcttgaaagtgtccgaacaaatgatggtgagttaaat
atccatcttgagcttattccattggacaaacaaacaacaccaagtctgaaaaagccccat
ctctgctgcaggccaagtacatcagttgaacacctctatgaatttgttgctcaggagaca
aaatcacaagcaaaagatgttgaattactggcaataaaggacaataccactgttaaccat
tcaaccttaatggatgcatcaaatatgctagcccgagttgtcagggggtccgatgttact
ctgcaaagcttggaaaggcgagaaacttgcccattaaataagaatctgatccttgcttac
gtgcaaaagaattcagccgatatgtga
DBGET
integrated database retrieval system