Novibacillus thermophilus: B0W44_14280
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Entry
B0W44_14280 CDS
T04694
Name
(GenBank) DNA polymerase domain-containing protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
ntr
Novibacillus thermophilus
Pathway
ntr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ntr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
B0W44_14280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ntr03400
]
B0W44_14280
Enzymes [BR:
ntr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
B0W44_14280
DNA repair and recombination proteins [BR:
ntr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
B0W44_14280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
AQS56741
UniProt:
A0A1U9K9P7
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All DBs
Position
2929851..2930750
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AA seq
299 aa
AA seq
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MKELKDKIVKVEGKHIQVTNPDKILFPDISMTKWDYVMHMARLAPFMLPYTRDRLLTVIR
YPDGVRGKHFYQKNIPSYAPDWVETKTDGDNEYILLQNTATLVWLATQAALEFHTSFHLA
GSDIPAELVFDLDPSREGFEAVTEVALLLHQVLQSIGLNAFAKTSGATGIQVYVPIERRY
SFKQTRRVGQFLGKYLQERHPRLVTLERMKRLRGHKVYFDYLQHWHGKTIAAPYSPRARA
QAPVSTPVSWRELEKGVHPDDFTLLNIHRRLEVTGDIFQKVLDVRKRQSLDAILHVIRT
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaattgaaggacaaaatcgtgaaagttgaaggcaagcacattcaagtcaccaat
ccagacaaaattctctttcccgacatctcaatgacgaaatgggactacgtgatgcacatg
gcccgcctcgcaccgtttatgctgccatacacgagagaccgcttgctcacagttatacgc
tacccagatggagtgcggggaaaacacttttaccaaaaaaacattccttcctatgcgccg
gattgggtcgagacgaaaacggacggagacaatgaatacattttattgcaaaataccgcg
actctcgtctggttggccacacaagcggcactggaatttcacacgtcgtttcatttggcc
ggaagcgacatcccggctgaactcgtatttgatttagacccttctcgagaagggtttgag
gctgtgacggaagtggccctcctgctacatcaggtgctccaatccatcggactgaacgca
ttcgccaaaacgtcgggagccaccggcattcaagtgtacgtgccgattgagaggcgttac
tcatttaaacagacgagacgagtcggacagtttctcggcaagtatttacaggaacggcat
cctcgcctcgtgacactggagaggatgaaacgcctgcgcggccacaaagtgtacttcgac
tatttgcagcactggcacgggaagacgattgccgccccctattcgcctcgggcgagggca
caagccccggtgtccacgcctgtttcgtggcgtgaattggagaagggcgtacatcctgac
gacttcaccctcctcaacatccacaggcggctggaagtgacaggcgacatcttccaaaag
gtgttagacgttcgcaagcgtcagtcattagacgcgatcttacacgtcattcgcacttga
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