Candidatus Nitrohelix vancouverensis: G3M78_09715
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Entry
G3M78_09715 CDS
T09852
Symbol
trpB
Name
(GenBank) tryptophan synthase subunit beta
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
nva
Candidatus Nitrohelix vancouverensis
Pathway
nva00260
Glycine, serine and threonine metabolism
nva00400
Phenylalanine, tyrosine and tryptophan biosynthesis
nva01100
Metabolic pathways
nva01110
Biosynthesis of secondary metabolites
nva01230
Biosynthesis of amino acids
Module
nva_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
nva00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
G3M78_09715 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
G3M78_09715 (trpB)
Enzymes [BR:
nva01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
G3M78_09715 (trpB)
BRITE hierarchy
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
QPJ65654
LinkDB
All DBs
Position
2107251..2108447
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AA seq
398 aa
AA seq
DB search
MDYSYPDPTGHFGIFGGKYVIETLMPALEELERVYEEARQDPKFKEDLNYYLAQYVGRPT
PLYFAENLTKRLGGARIYLKREDLNHTGAHKINNTIGSALLTKRMGKKRVIAETGAGQHG
VATATAAALFDLECDVFMGEEDMRRQALNVFRMKLLGARVIPVTAGTRTLKDATSEAIRD
WITTVETTHYIIGSVVGPHPYPMIVRDFQKIIGEETMRQLEAEEGRMPDLCIACVGGGSN
AMGMFYPFVTHPEVKLLGVEAAGHGIETGKHGASISHGKSGVLHGMMSYLLYDADGQIQE
AHSISAGLDYPGVGAEHSHFKESGRADYAAITDKEALEGFKLLSTTEGIIPALESAHAIA
QVAKTAPTMKKDQVIVICLSGRGDKDVTQVADILGDEL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggactattcatatcctgacccaacgggacattttggaatttttggcggcaagtatgtc
atcgagacgctcatgcccgccctggaagaattggaacgagtgtatgaggaagcgcgacag
gatccgaagttcaaagaggatttgaattattatctcgcccaatatgtggggcgccccacg
cccttgtattttgccgaaaatctgacgaagcgtttgggcggcgctcgaatttatttgaag
cgcgaagaccttaaccacactggagcgcataaaatcaacaacaccatcggtagcgcgttg
ttgaccaagagaatgggaaagaagcgcgtgatcgccgaaaccggggcaggtcagcatggc
gttgccacggcgacggcggcggctctgttcgatctggagtgcgacgtcttcatgggcgag
gaagacatgcgacgccaggctctgaatgtgtttcgcatgaaattgctgggcgcgcgcgtg
attcctgtgaccgcgggaacgcgaaccttgaaggacgcgaccagcgaagcgattcgcgac
tggatcaccacggtggagacgacgcattatatcatcggttccgtggtcgggccgcatccc
tatccgatgatcgttcgggattttcaaaagatcatcggcgaagagacgatgcgacaactc
gaagcggaagaggggcgcatgcccgatttatgcatcgcctgcgtgggcggcgggagcaac
gcgatgggtatgttctatccctttgtcactcaccccgaggtgaaattgcttggagtggaa
gcggcggggcatggcatcgaaacgggcaagcatggcgcgtcgatcagtcatggcaaaagc
ggcgtcctgcacggcatgatgagttatctgctctacgatgcggacggtcagattcaggaa
gcgcattcgatttccgccggactggattatcccggcgtgggcgcggagcacagccatttc
aaggagagcggtcgggcggattacgcggcgatcacggacaaggaagctctggaaggtttc
aaactgctttccactacggagggaatcattccggcgctggagtcggcgcacgccattgct
caggtcgccaagacagcgccgacgatgaaaaaggatcaggtgattgtgatttgtctctcc
ggacggggcgacaaggacgtgactcaggtcgcggatattctgggagatgaattgtga
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