Nematostella vectensis (starlet sea anemone): 5503648
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Entry
5503648 CDS
T01037
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X2
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03013
Nucleocytoplasmic transport
nve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
5503648
03015 mRNA surveillance pathway
5503648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nve03019
]
5503648
03041 Spliceosome [BR:
nve03041
]
5503648
Messenger RNA biogenesis [BR:
nve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
5503648
Spliceosome [BR:
nve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
5503648
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
5503648
NCBI-ProteinID:
XP_001624661
UniProt:
A7SUQ0
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MADAGFFRGTSAEQDNRFRDKQKKLLKSIRFEDVLDKKVDMEKINLDVLKPWITKRITDM
LGFEDDVVLEFVFNMLESEKHPDPKVMQINITGFLQAKNARIFMGELWELLVSAQENIGG
IPTEFLEKKKEEIKQRKLEQERIQANLKRQGELMQAEADSTGVEDLTGSSSLPDEVRKAT
EAAVLLAESAEPRDGRAREATHKDIKKERDSYRKSRDKGRKRSQSRSSSRSRSSSYSRSR
SRSPDRRKRSYSPPPRRRSPFRERRRSPPRRTSRWSSQSPDRRSPARRSKSPKSLSPPPP
RTKPRIKSSPARSRSRSQSASPRHSKSKSPALSKVQVKTEKKTPSPPPIKKTIGSASPPP
SHHRSEYKKRDVQDSPVRQPSLSPSPSPERKKEDPKEKSPPLPKSKKMANRSYRKHNSSE
SESDSDSPPERKKGSVSPRDQRRRSPMRRRRSRDASPRRRRRSASGSDSSPHRRSESPRD
RRRRSPEHRRRREASPPRRDRKRYDSPPRRRRRSPSPPPRRRRRDSYSPSRRRRDSPTPS
PPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQRKRASTPPSPRRARRKVASPEE
QDRQKSNGRNSRSVSPSAVKRTKGSKRSESRSVSRSPERDRKGRDSAKKERQSHSESPQR
VTKSSKERVRDPSASSSSSADEPTPVKGAKRVGRRSRSRSATPQRKQTRHRHSASPEPRK
RPRHQSRERRPSSSPPRRSRPQRTSPSPRRTPEDRRRSRGSRRSPSPPKREPRRRSPSAS
PPRREARKRSLSRSPKREVRRRGSPSPSEGRKKPVDVEMGEEEAPPCKAARKSPSADEEP
AEEAPSKALSGEEDEWVEKEGKEKKKKHKKHKKHGSAKHKKKDKKHKKQKEKQKTSDGSE
SDEAPVPREDDDNENLEKKLREKALLSMRKHKEPNTEEDEMDTVD
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcagggttctttcgaggcaccagcgctgagcaggataaccgtttcagagac
aagcagaagaagttactaaaatccatacgattcgaggatgtcttggataaaaaggtggat
atggagaagataaatctggacgtcttaaagccgtggattaccaaacggatcaccgacatg
ttggggttcgaggacgatgttgtcctggagttcgttttcaacatgcttgaatctgagaag
catcctgaccccaaggtcatgcagatcaacatcactggcttccttcaggccaagaatgct
cgcatcttcatgggcgaactttgggaattgcttgtcagcgcacaggaaaacattggcggc
ataccaactgaattcttggagaaaaagaaagaagagataaaacagagaaagcttgagcaa
gaacgcatccaagccaatcttaagcgccagggggagttaatgcaagcggaagctgacagt
acgggtgtcgaggacctcacagggagttctagtctcccagatgaggtcaggaaagccacg
gaggcagcagtgcttctagcagagagtgcggaaccccgtgatggccgtgcaagggaagcc
acacacaaagacataaagaaagagcgtgattcctacagaaagtccagagataaaggccgg
aagcgcagccaatcacgttctagctccagatctcgctcatcttcatactccagatccaga
tctcgcagtcctgacaggagaaagcgctcctactcccctccaccccgacgcaggtcaccc
ttcagggaaagacgcaggtcacccccaagacgcacatctcgctggagctcacaatcacca
gaccgtcgctcccccgcaagaaggtctaaaagtccaaagagcttgtcccccccaccacct
cgcaccaaacccaggataaagtcaagcccagcacggtccagatccagatcccaaagtgca
agcccacggcactctaaatccaagtcaccagcactttcaaaagtacaggtaaaaactgag
aagaaaacccctagtcctcctcccatcaagaagacgatagggtccgcctcaccgccacca
tcccaccaccgctcagagtacaagaagagagatgtccaggactctcctgtgcgacaacct
tccctctctccctcaccttcaccagaacggaaaaaagaagaccccaaagaaaagtcccca
cctcttccaaaatccaaaaagatggcaaatcgaagctacagaaagcacaattcttcagag
tcagaatctgactcagactcgccaccagaacgcaaaaagggatcagtgtcacccagagat
caaagacggcggagccctatgaggaggaggcggagtagagatgcctcgcccaggcgccga
cggagaagcgcgtcggggtcagactcatccccacacagaaggtctgagtcaccaagagat
aggagacgacggagcccagaacacaggcggaggagggaggcatccccaccacgccgagac
agaaaaagatacgattcaccgccaagaaggcgaaggcgatccccatcaccaccccctaga
agaagacgcagagattcctactcaccgtctcgccgcagacgagactccccaacgccttcg
cctcccccaaggcgcaggagaaaatccccaagcccatcaccaccccgtagacgccggcga
tccccttccaattccccacctccaatgcgctcatcacccttgcctcccccacagcgcaaa
cgagcctcaaccccaccctcccctcgtcgggcacgccgtaaggttgcatcacctgaggaa
caagacagacaaaagtcaaacggccggaactcaagatccgtttctccatctgcagtgaaa
aggaccaagggaagcaagaggtctgaatcacgctcagtgtcacgttcaccagagcgtgac
aggaaaggacgtgacagtgccaagaaggagcgccaatcacactcagagtcgcctcagaga
gtaaccaagtcgagcaaggagagagtgcgtgacccatcagcctcctcatcatcatcagcg
gatgagccaacgcctgtcaagggggccaaacgagttggccggcgctcacgcagccgttca
gcaacaccacaaagaaagcaaaccaggcaccgccattctgcttcccccgagcctcgcaaa
agaccacgccaccagtcaagggagagacgtccgtcctcctctccccctcggcggtcacgt
cctcaacgaacctccccatccccacgccgcactcctgaggacagacggaggtcacgtggt
agccgccgttcaccctcaccacccaagcgcgaacctcggcggcgcagcccctctgcctcc
ccaccaagacgggaagcccgcaagcgaagtttgtcacgatccccaaaacgggaggtgcgt
aggcgtggcagcccctctccttcagaaggcaggaagaaaccagtggatgtggagatgggg
gaagaagaggccccgccctgtaaagcggcgcgtaagagcccgtcagctgatgaagagcca
gcagaggaagctccgtccaaggctctgtcaggcgaggaggacgaatgggttgagaaagaa
ggcaaagaaaagaagaagaaacacaagaagcataagaaacacggctccgcgaaacacaag
aagaaagacaagaagcacaagaagcaaaaagaaaagcagaaaactagtgatggttctgag
agcgatgaggcgccagtgccgcgtgaggatgacgataacgaaaacctggagaagaaactc
cgcgagaaagcgctactatccatgcgtaaacacaaggagccgaacacagaagaggacgaa
atggataccgtggattag
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