Nematostella vectensis (starlet sea anemone): 5512832
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Entry
5512832 CDS
T01037
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nve04040
]
5512832
Ion channels [BR:
nve04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
5512832
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
DUF3899
Motif
Other DBs
NCBI-GeneID:
5512832
NCBI-ProteinID:
XP_032238212
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MAVNGKYTAINEAREHLIRASETEGSPLIRIRNPALRKRSSKRPEYVRMRTFGSSADKCG
PHQAAREGMLDVLKDFSDSLDSLVDKDVEGFEPIHHAVMADQAEAVELLLNAGVCVGSPG
GEDELSPLHIAVRYNSLKAAKALMHHGADPSVQCNNGTTPLHLVARHGSQSLAELLLSDP
RASVNTVCHGGLSPFHLACVSGNAQMCELFLAHEADIWLKSAEGRSPLHLAAASGHHQVV
DMIMKYAIPQTKRLGELINSQDSEEITPLHVACLAGHVTTVEVCLKHGAELDARHAWGLN
TALHVVSIAGHVEVAKLLVSRGADVTVRNAAQRVPLHLAAHLGHCDVIKFLLENGSPIDP
RDETSSTPLLLATRSGRTEAASLLLESGADVGIRTEALKSCLHVAVQNKHLDTARMLCDK
CDADLINAGDRDLRVPLHHAASNAQLEMIKLLLAHGAHLGPRDVFGRTPLHMAAEHGNES
CFSTLINDAPADINVADDSGSTPLHLAAAKGHRKLCKFLVGAGADVSTKDSSRWTPLHHA
AGAGHVRTVETLMRATNIGFSYSLEAEDWRGNTPLMTAAGRGRDRVVQVLIQHKADVTAR
NAKGMTALDIAIENANATVVMEILKSESWFDILRPRPSDDVIPMQKIIETMPEVAEHVMD
RCITCSSLPRHHHDYAVKFDLRLLDTSLEEEQDINNKGSPPRFFAPSVMVAANSEKLLTH
DLTQALIRLKLNSLGRPLYWFNFSTFAVYLIMFTLFVINTRTGQSLFPPGSNKTDEEDAK
LFDRPRQNNYNLVFPYIVLLFVSLHVIKEIYQMYLLRWSYFTSVTNYLEWAGYLTSYMFI
FPFVYGGNVYKGTGFLWPLGSTAMLLCFTNAILFLRRVHVFGLYISMYIEVLKSLIKVLM
VFILFILAFALAFYCLLKEQDAFKSFKWSFLKTFMMMVNGMDYQTTIVDSLGEHNPVSGA
PLVPVPSFTVFIMVLFVILIVILLVNLLIGLAVGDIDAIRQTANLRQLAMEVEYVANLDE
RLPKRFLKALQKPTLEIRPNQKYDWITAIRAYGIELKSPPEPSPHMSAGDPLKDDATMVL
KQQRMRIKELQSTINQQTVLLNSICDQLQKLTGVPNMPLHREVLDSSGSVESDENSGETV
FPPNEKGSTT
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggcggttaacggaaaatacactgcgataaacgaagctcgagaacatcttataagagct
agtgagacagagggaagccccttaatcagaatacgaaatcctgcgctaagaaaacgctcg
tcaaaaaggccagagtatgttcgaatgcgaaccttcggctcgagtgccgataagtgtggg
cctcaccaagcggcgagagaagggatgcttgacgtgctcaaggatttcagtgatagtctt
gatagccttgttgataaagatgtagaagggtttgagcctattcaccacgctgtcatggcc
gaccaggcagaagctgtggagttattgttgaatgctggtgtttgtgttggttcccctggc
ggagaagacgaactcagccccttacatatcgcagtcagatacaacagtctgaaagctgct
aaggccctgatgcatcatggggctgacccttcagtccaatgcaacaacgggaccacccca
cttcatctagttgctcgtcatggttcccagtccctcgcggagctactgcttagcgaccct
agggctagtgtaaatacagtctgccatggcggactgagcccgttccatctggcttgtgtc
agcggcaacgcgcaaatgtgtgagctatttttagcccatgaggctgacatctggctcaag
tctgcagaagggaggagcccactgcatctcgctgcggccagcggtcaccatcaggtggtc
gacatgattatgaaatacgcaataccgcagaccaaaaggctcggggagctgatcaactca
caagactcagaggagatcactccactgcatgtcgcttgtctagcgggtcacgtgaccaca
gtcgaggtgtgcttgaagcatggtgccgagcttgacgcgaggcacgcctggggtttgaat
actgccttgcacgtggtttcaatagcaggtcacgtggaagtggccaagcttcttgtgtca
cgtggtgctgacgtcactgtgcggaatgctgcgcagagggttccacttcacttggcggcg
cacttggggcattgtgacgtcatcaagttccttcttgagaatggatctcccatcgatccc
cgcgatgagacaagctcgaccccactcctccttgccacacggagcggtaggaccgaggct
gcgagcttacttctggagtctggggctgacgttggaattcgaaccgaagccctcaagagc
tgtttgcatgttgcggttcagaacaagcatctggacacagcgcgcatgctatgtgacaag
tgtgacgctgaccttatcaacgcaggcgatagagaccttcgcgttccgttgcatcacgcc
gcctcaaacgcacaactagagatgatcaagcttcttcttgcgcacggtgctcatcttggt
cccagagacgtgttcggccgcactccactgcatatggccgcggagcatggtaacgaatca
tgcttttcaactctcatcaatgatgcgcccgcagacatcaatgttgcagatgacagcggt
tctacaccccttcatttggcggcagctaaaggtcatcggaaactctgcaagttcttagtc
ggagccggagcagatgttagcactaaagacagcagtcgctggacacctctccaccatgcc
gcaggcgcaggtcacgtgagaactgttgagactttaatgcgcgcaaccaatatcggtttc
agttactccctggaagcggaggactggcgcgggaatacgccacttatgaccgcagcgggg
aggggacgggatcgtgtggtacaagtcctgattcagcacaaggctgacgtcactgcacga
aacgcgaaaggcatgacggccctggacatcgccatagagaatgctaatgcaactgttgtc
atggagatcctcaagagtgaaagctggttcgatattttgaggccacgcccttccgatgac
gtaatcccaatgcagaaaataattgagacgatgccagaagtagccgaacacgtgatggac
cgctgtatcacgtgttcgtctttgccacgccatcaccatgactacgctgtgaagtttgac
ttacggttactggacacctctcttgaagaggaacaagatatcaacaataagggaagtcct
ccgcgattttttgccccatctgtcatggtggccgcaaactccgaaaaactgctgactcac
gacctaacccaagccctcatacgtctcaagttgaacagccttggaaggcctctatactgg
tttaacttctcgaccttcgcagtgtatctcatcatgttcactctgttcgtgattaacacg
agaacaggacagtcgctttttccccctggcagtaacaagacagatgaggaagacgccaaa
ttgttcgaccgtcctcgtcaaaataactacaatctggtgttcccgtatatcgttctcttg
ttcgtctcgctgcatgtgattaaggaaatataccagatgtatttgctgcgttggtcatat
ttcacgtctgttacgaactacctcgaatgggctgggtacctgacgtcatatatgtttata
tttcccttcgtttacggaggaaatgtatacaaagggactggtttcttgtggccgttagga
tcgacagcgatgctgctatgtttcacgaatgctatcttattcctccgccgtgtccatgta
ttcggcctgtacatcagcatgtacatagaggtactcaagtcccttatcaaagtcctaatg
gtcttcattttgttcatcctcgccttcgcgctcgcgttttactgccttctaaaagaacag
gatgccttcaagtcgttcaagtggtcgtttcttaagacgttcatgatgatggttaacggg
atggactatcagacgactatcgtggactcccttggagagcacaatcctgtgtccggcgct
ccactcgtgccggttccgagttttacagtgttcatcatggtgctatttgtaatacttatt
gttattcttctggttaatttactgattggtcttgcagtcggagatatagatgcgattcgt
caaaccgcgaacttacgccagctagcgatggaagtcgaatatgtggcgaaccttgacgaa
cgcttaccgaagagattcttgaaagcactgcagaaaccaacgctagaaattcgacctaac
caaaaatacgactggatcactgcaatacgagcttatggtatcgaattaaagtccccacca
gagccttcgccacacatgtcagcgggggaccccttgaaagatgacgccactatggtactc
aaacagcagcgcatgcgtatcaaagagctgcagtctacgattaatcaacaaacagttctg
ctcaattcaatttgcgatcagcttcagaaactaacaggcgttcctaacatgccattgcat
cgtgaagtacttgactccagcggaagtgtagagtctgatgaaaatagtggtgagacagtt
ttcccgccaaacgaaaaagggtcaactacataa
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