Neodiprion virginianus: 124304580
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Entry
124304580 CDS
T09046
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
nvg
Neodiprion virginianus
Pathway
nvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124304580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvg03041
]
124304580
Spliceosome [BR:
nvg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124304580
Complex C
U5 SnRNP specific factors
124304580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
eIF2A
Ge1_WD40
Nbas_N
Motif
Other DBs
NCBI-GeneID:
124304580
NCBI-ProteinID:
XP_046618946
EnsemblRapid:
ENSNVRG00000006306
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All DBs
Position
1:complement(26111613..26113601)
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AA seq
371 aa
AA seq
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MHSSAARWLVVCEQTFYNFTITMPILDKRKGDEILALVPASKRTKNEVVFSSREKAVIQS
GPPRTSSLMAPIMLLEGHQGDIFSVEFHPEGQYLASTGFDRQIFIWNVYGECENIAVMSG
HSGAVMEMHFSPDGSNLYTASTDMTLGLWDLGSGYRIKKLKGHTSFVNSISGARRGPTQL
CSGSDDSTIRVWDPRKRGQCQTLNNTYQVTAVTFNDTAEQVISGGIDNDIKVWDLRKNAV
LYRLKGHTDTVTGLSLSPDGSYILSNSMDNTLKIWDVRPFGPYERCVKILSGHQHNFEKN
LLRCAWSPDGSKVSSGSSDRFHYIWDTTSRRILYKLPGHNGSINDVDFHPKEPIVVSGSS
DKQIYLGEIEG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcacagttcggctgctcgctggttggttgtttgtgaacagacattttacaattttaca
ataacaatgccgatcttagacaagagaaaaggtgatgagattctagcattggtgccagct
tcgaaaagaacgaaaaatgaagtggttttcagcagtagagaaaaggcggtgatccaaagt
ggccctcccagaacttcatcacttatggcgccaattatgctccttgaaggacaccaagga
gatattttctctgttgagtttcatccggagggtcaatacctcgcatcgacgggttttgac
agacaaatatttatatggaacgtctatggcgaatgtgagaacattgctgtaatgtcgggc
catagcggcgcagtgatggaaatgcacttcagcccagatggcagtaacttgtacactgca
agcacagatatgaccctgggactctgggatctcggatctggatacagaataaagaaactc
aaaggacacacatcgtttgttaattctatatccggagctcggagaggacctacacaactt
tgttctggcagtgatgatagcactattcgtgtctgggatccaagaaaaaggggccagtgt
cagactcttaataatacctaccaggtaactgctgtgacattcaatgatacagcggaacaa
gtcatcagcgggggtattgacaacgacattaaagtttgggacttacgaaaaaacgcagtg
ctctatagattgaagggtcacacagatacggttactggtttgagcctgagtccagatggt
tcttacatattatcgaattcaatggacaacacccttaaaatatgggacgtccgtcctttt
ggaccctatgaaagatgtgtaaaaattttatccggccatcagcataatttcgagaagaac
cttctgaggtgtgcatggtcaccagatggcagcaaagtgtcttcaggatcgtcagataga
tttcactatatctgggacacgacaagccgacgtatcctttacaagctccctggtcataat
ggatcaattaacgatgttgattttcatccaaaagaaccaatcgttgtttccggctccagt
gacaaacagatataccttggagaaattgaaggctga
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