Neodiprion virginianus: 124306339
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Entry
124306339 CDS
T09046
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13 isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
nvg
Neodiprion virginianus
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124306339
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
124306339
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
124306339
NCBI-ProteinID:
XP_046622880
EnsemblRapid:
ENSNVRG00000010749
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Position
5:3048448..3077855
Genome browser
AA seq
1986 aa
AA seq
DB search
MTHPSHQTNGASLEDCHTNFFALTDLCGIKWRKLVWGEVIGGFGGTPLEDPVLSSFSRCL
ASDILCVWRRVAATPSSGTSGTSGAAGAGLFDLRLAPSPAPPPLSLTAAKELWIFWYGEE
PDLSGLVSPELIAIEGEQGSWESGLSYECRSLLFKALHNLIERCLLSRDFVRLGKWFVQP
YDGFEKHRCNSSHLSFSFAFFVHGESTVCASVDVRQHPAVRYLTRTCLQRTQTTQSAVKV
ILAPYGLAGTLTGQVGRVDSQLLEEWRHFYPINGASTESGLPPLVEVLVGGVRMRYPSCY
VLVTDMDDVPTDAPLSPPSSPANYEHPLSTQRDLKAASELPERVWAECTLNSPMPTPKSI
DSSPEPGTWTFADATKKSSCSCSKCATPGGWKSLASSTQFHREKLDKGGRRVVPFHRRSA
TQWDAPPPPPANAPRLLLNRTEAPSTPPGGPPSYPRGPPTGGDCLPVPSVGSPGSPAPSP
LPTPHSEPASVPPADPTMPTLSPQPPPSQPNAAPPMTPPQGPKSASSTCNQVFSPVPGPT
LKRPILASREYEGALLEDEQPLSWLYDYSTQEAWLNHPVKRFKGSASGVANLRGVNLYPP
LNQQQQQSQAPKLEIKQEPNAAPGECVGGRTDPYEFDAAGEENGTGVDGLRRPREDPPKP
GSLFTSEGLQASYKDLDQIFDNSDPDTSSDETNLNQLQVQTPPGSNKSGGLHEETRLDGV
NKHNSRGVGVLRPEELSKMFPTPPSLEHNPVASPCQLSDPPMDQTELSTNQRSLRHQPDI
YPNMGSPAEESIDDWSYVFKPAPICKLVGSSKYAPLTNLPSQSLPPVSLPSHCVYRPSWQ
CNPVTNSNPDKILPPTRPGSVQQQPCPPSPAPLGTPYRAATLSGRPPPPPYDQPSPATST
TSSYLNKNLNSIEADTPGPIRAPESNSLVVNILLGDTALNIFRDHNFDSCSLCVCNAGPK
VVGNIKGADAGIYLAGSWGTGGAQFQDDDQIRCNCGFSAVVNRRLAHRAGLFYEDEMEIT
GIAEDPSEKKKGSLVGVACGGGKAPPEGLDLIPPNVLELLREQCLIVQSSASSLNRAAKI
YAGIKNYSSLIPTVNTLEFNDGNEVSLAALDQGKIDSTPNEKTNRVNGVHRWVFLRARGP
QCSGDIVRVMRSLQPLLQEAVQRKCTTRMWEAPYTVAGPLTWRQFHRLAGRGTDDRCEPQ
PIPALVVGYDRDWLSLSPYALSYWEKLLLEPYAGPRDVAYVVVAPDSEPVITKVRSFFKE
LSTTYEICRLGRHTPISKVVRDGILRVGKVTAQKLTKQPIDEWFKLLGENQIGELLRLYA
HVCNYRLAPYLTQVIQDRSLLEPGDSPSKQQQPPPAPTPETTPATPDSSTPKPEPTEGEN
VRSETPLSNTTPNTGSGTGNTTPVSINTNSNVTTTVGPDEEEVEPPAVVVYLVEPFSLGG
AEDPDRRRLAILALLRAYSAAVNSMPENIRSNINVQLISLESIMELGRARERRRAQDEMR
SLALNVFLQGRRLLNHNSTVKSLTGFGTAAAADIFLKSKDERNKAPYRLYAPAYVLAPLR
GKSEAPESFGMAGPEECAVLYLSYCLSEDQAWLLAVATDDRGEIFETATINVDVPNRRRR
KRASARRVGLQKLMDFILGVMSQGVQPWRLVVGRVGRIGHGELKGWSWLLSRKALLKASK
HLKEICGQCSLMYPGAAPCVLSACLVSLEPDSTLRLMADQFTPDERFSQASVNCQLSTPQ
DVTCTHILVFPTSATTQSSQTAFQEQHINGPYLGDDELFSVLDDDMPEGMEGMGDFNDIF
NVWPEAGAGGGQSPGASPHRQEGSPLGAEGGGSGLGNHDGPGSPFPCNNTPRTAVNDQAE
EVGTLLQQPLALGYLVSTAPTGRMPSWFWSACPHLDGVCPVFLKNALHLHSPAIQQNSDD
LLQQQSALTAHPLDSQYTTDVLRYVLEGYNALSWLAVDANTKDRLSCLPVHVQALMQLYH
AAAALV
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatccatcgcatcaaactaacggcgcgagcttagaggattgccacacgaacttc
ttcgctctgactgacctctgcggtataaaatggaggaaactagtttggggcgaagtgatc
ggtggattcggaggtaccccccttgaagatcctgtactatcgagtttctcccggtgcctg
gccagcgacatactctgcgtgtggcggcgcgtcgcggctacaccgtcatccggtacatcc
ggtacatccggggctgccggggccggcctatttgacttgaggctcgcaccttccccagcg
cctccgcccttgtctctaacggcagcgaaggaactctggatcttttggtacggcgaggag
ccagatctttccggacttgtttcacccgagctcatcgccatcgaaggtgaacaaggctct
tgggaaagtggattgtcttacgagtgccggtcgttactattcaaggccctgcacaatttg
atcgaacgttgcttactttctcgtgattttgttcgtcttggcaagtggtttgtccagcct
tacgatggttttgaaaaacatcgctgcaacagcagtcacttgtcgttctccttcgcattt
tttgtccatggagaaagcacggtatgtgcaagtgtggacgtcaggcaacatccagcggta
cgataccttaccaggacttgtcttcaacgtactcaaactactcaatctgccgtcaaggtg
atcctagcgccatacggacttgctgggaccttgaccggtcaagttggcagagtcgatagt
caacttctagaggaatggagacatttttatcccataaatggtgcatccacggaatcagga
ctaccgccattggtcgaagttttggttggaggagttcgtatgcgctatccttcttgctac
gttctcgttaccgacatggacgatgtaccgactgatgctcctctctcgccaccgagtagc
ccagccaattacgagcaccctctttcgacacagagggacttgaaagcagccagtgaactt
ccggagagggtgtgggcggagtgtacgctaaactcccccatgcctacacctaaaagtatc
gattcttcaccggaacctggcacatggacctttgccgatgccacgaaaaagtcttcctgt
agctgctccaagtgtgcgacccccgggggttggaagagtctggcatcctccacgcagttt
catagggagaaattagataaaggtggacggagggtagtgccgttccacagacgctccgcg
actcagtgggatgctcctccccctccccctgccaatgcccccagattgctactgaatcgt
accgaggctccaagtacaccacctggaggacccccttcctacccaaggggacctccgaca
ggaggagattgtctgcctgttccatcggttggctctcctggctctccggcaccctctccg
cttccaacgccccattctgagccagcttctgttccaccagcagatccgacgatgcccact
ctcagtccgcagccaccccccagccagccaaacgctgctccgcctatgactccgccacag
ggtccaaagtcggcctcgtccacttgcaaccaggttttcagccccgtccctggtccaaca
ttgaaaagaccaatcctggcatccagagaatacgaaggtgctctgctagaagatgaacaa
cctctttcttggctttacgactattcgacgcaagaggcatggctcaatcatcctgtaaag
agatttaaaggatcagcatctggagttgcgaatttgagaggggtcaacttatatccgccc
ttgaatcagcaacaacaacagtcgcaagctcctaagctcgagattaaacaggaaccaaac
gcagctccgggtgaatgcgttggaggaagaacagacccttatgagtttgacgcagcagga
gaagagaacggaactggagtcgacgggctcagaagacctagagaagatcctccaaaacct
gggtctttatttaccagcgagggtctccaagcatcgtataaagatcttgatcagattttc
gacaattctgatcccgatacttctagcgacgagactaacttgaaccagcttcaagtacaa
acgccaccgggatcaaacaagtctggaggtctgcatgaagagaccaggcttgacggagtc
aacaaacacaacagccgaggcgttggtgtacttcgacccgaagagttgtcgaagatgttt
ccaactccaccttccctggagcacaaccctgtcgcttcaccatgtcagctcagcgaccct
ccaatggatcaaacggagttatcgacgaaccaacggtcgctcaggcatcagccggacatt
tatccaaacatgggatcacccgccgaagagtcaattgacgattggtcatacgtttttaaa
cctgctccaatttgcaaacttgtgggctcttcgaaatacgctccgctgactaatttacca
agtcagtcgcttccgccggtttctcttccatcacactgcgtctacagaccgtcgtggcaa
tgtaatccagtgacaaatagtaaccccgataaaattcttccacctactagacctgggtcg
gtccaacaacaaccttgtccaccaagtcccgcgcctctcggaactccgtatagggcggcc
actttatccggaaggcctccgccccctccatatgatcagccaagtccggcaacgtcaact
acgtcttcttatttgaacaagaatttgaacagcatcgaggctgatactcccgggcctatc
agggctccagaatctaattcattggtagttaatattttgctcggagatacagcactgaat
atatttcgagatcacaatttcgacagctgcagcctctgtgtttgcaatgccgggcccaag
gtcgtcggtaatataaagggggccgatgctggaatttacttggctggttcttggggaacg
ggaggagctcaattccaagacgacgatcaaatacgatgcaattgcggatttagcgcggtt
gtcaatcgtcgtcttgctcatcgggcgggcttattttacgaggacgagatggagatcacc
ggcatagccgaggatccatctgagaaaaagaagggctccttggtaggggttgcctgtggg
ggtgggaaggcaccgccggaaggcttggatttgatacctccgaacgtacttgaactactc
agagaacagtgcttgatagttcaaagttcggctagtagcttgaatagagcagccaagata
tacgcgggtataaaaaattactcgtcgctcattccaacagtgaatactttggagttcaac
gacggcaacgaagtgtcactggctgctttagaccaaggaaaaattgacagtacaccaaac
gagaaaaccaatcgtgttaacggtgtgcatagatgggtatttctacgagctcgagggcct
cagtgcagcggggacattgttcgtgttatgaggtctcttcagccgttgttgcaggaggct
gtacaacgaaaatgtactaccagaatgtgggaggccccttacactgttgctggtcctctg
acttggcgacaattccatcgtttggctggccgaggtactgacgacaggtgcgaacctcaa
ccaatccctgccctcgtcgtcggctatgacagagactggctctctttatccccatatgct
cttagctactgggaaaaactattactggaaccctatgcgggtcccagagatgtcgcctac
gtggttgtcgcacctgacagtgaaccggtcattacaaaagtcagatcgttcttcaaggaa
ctatctactacttatgagatatgcagattgggtagacatactccgatatcgaaagtggtg
cgtgacggtatccttcgcgttggtaaagttacagctcaaaaattgacgaaacagccgatt
gatgaatggtttaaattgctgggcgaaaatcaaattggagaattgctaaggctctatgca
cacgtctgcaactatagactagctccatacctgacccaggttattcaagacaggagttta
ttagagcctggggattcgccgagcaaacagcaacagccaccgcctgctccaactcctgaa
acaacgccggcaactcctgacagctcaacgccaaagccagaacctacagaaggtgaaaat
gttaggagcgaaacaccgttatctaatacaacaccaaacactggatctggaacaggcaac
actacacctgtgtccattaatacaaatagtaatgtaacgacgactgtgggccctgatgag
gaggaggtggaaccacccgcagtagtcgtatatttagttgaaccgttttcacttggtgga
gctgaagatcctgatcgtcgcaggcttgctatcttggctttgctgcgtgcttattctgcc
gctgttaacagtatgccggaaaatatcagatctaacatcaacgttcagttgatttcccta
gaaagcataatggaattaggaagagcaagagaaaggcggagagctcaggatgagatgagg
tcactggctctgaacgtatttttgcaaggtcgacgacttctcaatcataattcaacagtc
aaaagtcttaccggttttggtaccgccgcggctgccgatatctttctcaaaagcaaagac
gaacggaataaagctccgtatcggctgtacgctccggcgtacgttttggcgccattgcgc
gggaaaagcgaggctcccgaatcctttgggatggcgggaccagaggaatgtgcggtgctt
tacttgagttactgtttaagcgaagaccaagcctggttactggccgttgctacagacgat
cgaggtgaaatcttcgagactgcgacaataaatgttgacgtaccgaacagaagacgcaga
aagagagcatcggctagacgtgtcggtcttcagaagttgatggactttattctcggtgtt
atgtcgcaaggggtccagccttggagattggtagtcggtcgggtgggtcgcatcggccat
ggtgaactgaaaggctggagttggcttctgtctcgcaaagcgcttctcaaggcgtcaaaa
catttgaaagaaatttgtggtcagtgtagtcttatgtacccaggggcggcaccttgtgta
ctgagcgcatgtctggtatctctagaaccagactcgacacttcggctgatggccgaccaa
tttaccccggacgaaagatttagtcaagcctctgttaactgccagctgtccacgccacag
gacgtcacgtgtactcatattctcgtctttcctacttcagctaccacgcagtcttcgcaa
actgctttccaagagcagcacattaacggaccatatcttggggacgatgaattgttttcg
gtacttgacgacgatatgccggaagggatggaaggtatgggagactttaacgatatattc
aacgtttggccagaggcaggtgccggaggaggacagagtcctggagcaagtccacatcga
caagagggctcacccttaggtgctgaaggcggaggttcaggcctcggaaatcacgacggc
cccgggagccctttcccttgcaacaatactcccaggacggcggtaaatgaccaggccgaa
gaggtcggaacgcttttgcagcagccgttagctcttgggtatttggtatccacagcacct
actggacgtatgccctcctggttttggtcagcatgccctcacctcgacggtgtttgtccc
gtcttccttaagaatgctttgcacctgcacagccccgctattcagcagaacagtgacgat
cttttgcagcagcagagcgcactcactgcgcatcccctcgattctcaatataccactgat
gtgcttaggtatgtgctggaaggatacaacgcattgtcctggctcgcggtggatgccaat
acaaaagaccggctatcctgtttgccggtccatgtccaggcactcatgcagctctaccat
gcagcggcagccctcgtctga
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