Nasonia vitripennis (jewel wasp): 100113726
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Entry
100113726 CDS
T01081
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
nvi
Nasonia vitripennis (jewel wasp)
Pathway
nvi03015
mRNA surveillance pathway
nvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100113726
09123 Folding, sorting and degradation
03018 RNA degradation
100113726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvi03019
]
100113726
03041 Spliceosome [BR:
nvi03041
]
100113726
Messenger RNA biogenesis [BR:
nvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
100113726
mRNA cycle factors
Stress granule specific factors
100113726
Spliceosome [BR:
nvi03041
]
Complex C
Other components
Complex C specific factors
100113726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_7
RRM_5
RRM_occluded
KCTD18_C
Motif
Other DBs
NCBI-GeneID:
100113726
NCBI-ProteinID:
XP_016843551
NASONIABASE:
NV16210
UniProt:
A0A7M7J6Q0
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Position
4:10412965..10418304
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AA seq
627 aa
AA seq
DB search
MNPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDAVTRRSLGYAYVNFQ
QPADAERALDTMNFDIIKGRPIRIMWSQRDPSLRRSGVGNVFIKNLDKNIDNKAMYDTFS
AFGNILSCRVAQDESGSSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFISRKER
EKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGKSRGFGFVAFE
DPNAADRAVADLNGKEIAEGKIMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYV
KNLDDTIDDERLRKEFAPFGTITSVKVMMEDGRSKGFGFVCFSLAEEATKAVTEMNGRIV
GSKPLYVALAQRKEDRKAHLASQYLQRVANIRMQHMGQVFQAGGAGSYFVPTLPQPQRFY
GPAQMAQIRTTPRWPAQPVRPNAQAAGSNFATMQTPFRAAPRAPTAQSSMARNALSARPI
TGQQAVPGAANMQNRSMAGPAVGVSPQSRTSNYKYTANMRNPPQTMAMPAQTPAQQAVHI
QGQEPLTASMLADAPPQEQKQMLGERLFPLIQCMYPHLTGKITGMLLEIDNSELLHMLEH
GESLKAKVEEAVAVLQAHQAKQAVKKE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccggagctccgaactacccgatggcctcgctctacgtgggtgacctgcactcg
gacatcaccgaggcgatgctgttcgagaaattctcgtcggccggacctgtactgtccatc
cgcgtctgtcgtgacgccgtcacccgccgttccctcggctatgcctacgtcaacttccag
cagcccgctgacgcggaaagagctcttgacaccatgaacttcgacataattaagggacgt
ccgatccgtattatgtggtctcaacgtgatccatctctcaggcgatccggcgtcggaaat
gtctttattaaaaacttggataaaaacattgacaataaggccatgtacgatacgttctcg
gcttttggaaacatccttagctgcagggttgcccaggacgagtcaggctcgtccaagggt
tacggtttcgtgcatttcgagaccgaggaagccgctaacaagtctatcgacagggtcaac
ggaatgttgctgaacggcaagaaggtctacgtcggcaagttcatctcccgcaaggagcgc
gaaaaggagctcggcgagaaggccaagctcttcaccaacgtctacgtcaagaacttcggc
gaggacatgaccgacgacaagctcaaagaaatgtttgagaagtacggtacgatcaccagc
cacaaggtaatgagcaaagacgatggcaaatcgcgcggctttggtttcgtcgcgttcgaa
gatccgaatgcagctgatcgagctgtcgccgacttgaacggcaaagagatagccgagggc
aagatcatgtacgtcggcagagcccagaagaaggccgagagacagcaggagctcaagcgc
aagtttgagcaacttaagatcgagcggctcaacagataccagggcgttaatctgtacgtc
aagaatttggacgacaccatcgatgatgagaggctcaggaaagagtttgctccattcggc
accatcacttccgtgaaggtaatgatggaggacggtcgtagcaagggcttcggtttcgtg
tgcttctcgctcgcggaggaggccaccaaagccgtgacagagatgaacggccgcatcgtc
ggctcgaagcctttgtacgtggctctggcccaacgcaaggaggaccgcaaggcccatctt
gcttcgcaatatctgcagcgcgtggctaacatccgtatgcagcacatgggccaggtgttc
caggccggcggtgccggcagctacttcgtgccgacgctgccgcagcctcagcgcttctac
ggaccggctcagatggcacaaatacgcaccaccccgcgctggcccgctcagccggtcagg
cccaacgcccaggccgctggttccaacttcgcaactatgcagacacccttcagggctgcc
ccgagggcacccactgcccagtccagcatggcgcgcaacgcgctttctgcaagacccatc
acaggccaacaagcagtccctggagctgccaacatgcagaaccgctctatggctggacca
gcggtcggcgtctcaccacagtcgcgaacctccaactacaagtacaccgcgaacatgcgc
aacccgccgcagaccatggcaatgccagcccagactccagctcagcaagctgtgcacatc
caaggccaggagccgctcactgcttctatgcttgccgatgccccgccgcaggaacagaaa
cagatgcttggcgagcgtctcttcccgctcattcagtgcatgtacccccaccttactggc
aagattaccggtatgttattggagatcgacaactccgagctgcttcacatgctcgagcac
ggagagtcgctcaaggccaaggtcgaggaggccgttgctgtactgcaggctcaccaggcc
aagcaagccgtcaagaaggagtaa
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