Nasonia vitripennis (jewel wasp): 100119821
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Entry
100119821 CDS
T01081
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
nvi
Nasonia vitripennis (jewel wasp)
Brite
KEGG Orthology (KO) [BR:
nvi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvi01009
]
100119821
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvi03019
]
100119821
04131 Membrane trafficking [BR:
nvi04131
]
100119821
03036 Chromosome and associated proteins [BR:
nvi03036
]
100119821
Enzymes [BR:
nvi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100119821
Protein phosphatases and associated proteins [BR:
nvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100119821
Messenger RNA biogenesis [BR:
nvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
100119821
Membrane trafficking [BR:
nvi04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
100119821
Chromosome and associated proteins [BR:
nvi03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
100119821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
NmU-R2_C_term
Polo_box_2
zf-UBP_var
PDEase_I
C1_2
Motif
Other DBs
NCBI-GeneID:
100119821
NCBI-ProteinID:
XP_031784677
NASONIABASE:
NV50794
LinkDB
All DBs
Position
4:complement(19046030..19052569)
Genome browser
AA seq
1186 aa
AA seq
DB search
MKNKFLRLFQMTFLNVIVNTHQYCASKHHVHLKKREGTHICIAVLILNMSELDARANLIS
AARKLADSEIQLIKAIDNSRHGNSDKELKTMSVKAKNSSNFINKKSARIANAKPSAAILA
AKREAAQRKKALEKKSSNTVIRDIYQKAIDAKEMIRKDTGLVYDESMAEHRCLWDENYPE
CPERFTRVFQRCKELGLVERCKYITPRSAEYSELLLKHTPAHIEILKSTEGCNNEKKLED
LSSKYDAIYFHPSTYQLSLLATGSTINLVENICKENIQNGMAIIRPPGHHAMKAEYCGYC
FFNNVAISAEVALKNNLAKRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYENGEFWPN
LRESNYHYIGDGPGEGYNFNIPLNETGMTNSDYIAIFQQVLLPMAYEFQPDLIIVSAGYD
AALGCPEGLMNITPACYTHLLSSLLGLAAGKVAVVLEGGYCLKSLAESAALTLRTLLGDP
CPMIEDLVPPCKSIQETILNVIYAHRLHWKCYQHQDSYSVNSTSSSDKKQDQHLPIVLFN
GPDELPTIFETRNCYPVQSQDELHEINKKLEHLQQITNLKKAPNRVCIVYDDRMLKHYNV
VDESHPEKPGRITSIFSKHKDYNLLERCILLQGRAASEEEILLAHTQDYLDNIKKTAETK
LKDLAKQASSLNSVYLHPETWTSAAISAGSLLQVVDSILNGESQSGVAIVRPPGHHAEED
AACGFCIFNNVAIAAKYAVSCHNLKRVLIVDWDIHHGNGTQSILENDSSILYISLHRYDN
GSFFPHSKAANYNVVGTGKGEGFNVNIPWNKRGMGDAEYIAAFQQVVMPIAYQYNPELVL
VSAGFDACIADPLGGCKVSPEMYGHMTHWLSSLANGRIILTLEGGYNVNSISHAMTMCTK
ALLGDPLVPLDAHQVACPSAVASINNVLQTHKQYWPNLVFQKALPQENVLPKARVPRAKP
TERLSTRENFPSLPHNGDPEQEPERNQSQPEDSTEQILQLEIHLDNLSIRECVNPDKKKE
DFSNPGGSSTGGSSGTDQPGTSSQGSTSETLADYLQDNLQALLAEEMFAVIPLSDCPHLG
SVKEVPASGIDVNSPCVECSSTVENWICLECYTVHCARNINQHALLHEQSTQHPLTLSFN
DVSVWCYGCEAYIDNPRLYAARNAVHIGKFHTELPWTYSDNAGSSS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataaatttttgagactttttcaaatgacttttttaaatgtaatagttaacact
caccaatattgtgccagtaaacatcatgtgcacttgaaaaaaagggaggggacacacatt
tgcatagcagtcttgattctaaatatgtcggaattagatgcacgtgccaatctcatcagc
gctgctaggaaattagcagacagtgaaattcagttgataaaagcaattgataattctagg
catggtaattcagataaagaattgaaaaccatgtcagtaaaggctaaaaactctagcaac
tttatcaacaaaaaatcagcaaggatagctaatgcaaaaccctctgcagctattcttgct
gcaaaaagagaagctgcacagcgaaagaaggccttggaaaagaagagtagtaatacagtt
attcgagacatttaccagaaagccattgatgcaaaagagatgattcgaaaagacactgga
cttgtatatgatgagtctatggcagagcatagatgtttatgggatgagaattacccagaa
tgtccagaaagatttactagagttttccaaaggtgcaaagagttaggattagttgaacgc
tgtaaatatattactccacgatctgctgagtatagtgaactacttttaaaacatacacct
gcccacatagagatactgaaatcaactgaaggttgtaacaatgaaaagaaattggaagac
ctgtcttcaaaatatgatgctatttacttccatccatctacatatcaactgtcactactt
gcaacaggatcaacaataaatttagttgaaaatatttgtaaagaaaatattcaaaatgga
atggctataataagacccccaggtcatcatgccatgaaagcagaatactgtggatactgt
tttttcaacaatgtagctatatctgccgaagtagccttaaaaaataatttagcaaaaaga
attcttatagtagattgggatgttcaccatggacaagcaactcaacaaatgttttataat
gatccaagagtggtttatttttctatacatcgttatgaaaatggagaattttggcctaat
ttgagagaatcaaattatcattatattggagatgggcctggggaaggctataattttaat
atccctcttaatgaaacaggcatgacaaattctgattatattgcaatatttcaacaagtt
ttgcttccaatggcctatgaatttcaaccggatctcatcatagtctcagctggttatgat
gcagctcttggttgtccagagggtttaatgaatattacccctgcctgttacactcattta
ctgtcttcactccttggtcttgcagctggtaaagtagctgtagttttagagggtggatac
tgtttaaaatcattggcggaaagtgccgcactcactcttagaacgcttttaggagatcca
tgtcctatgatagaagatttagtaccaccttgtaaaagcattcaagaaactatattaaat
gtgatatatgcacatagattacattggaaatgttatcagcatcaagattcttacagtgtt
aacagcactagcagttctgataaaaaacaagatcagcatttaccaatagttttattcaat
ggtccagatgagttgccaactatttttgaaactcgaaattgctatcctgtacaaagccag
gacgaattgcatgaaataaacaaaaaattggagcatcttcaacaaattacgaatcttaaa
aaagctccgaatcgagtatgcatcgtttacgatgatagaatgttaaaacattacaatgtg
gtggatgaatctcatcccgaaaaaccaggcagaatcaccagcattttttcaaaacacaaa
gattataatttgcttgaacgttgtattttactgcagggaagagcagcaagtgaggaagaa
attttattggcgcatacacaagactatcttgataatattaaaaagacagcagaaacgaaa
ttaaaagacttagccaaacaggcatcaagtttaaattctgtatatttacatcctgaaact
tggacaagtgctgcaatatcagctggttcgttactacaagtagtagatagtattttgaat
ggagaaagtcaaagtggagtggctattgtcaggcctcctggtcatcatgctgaggaggac
gcagcatgtggtttttgcatttttaataatgtggctattgcagctaaatacgccgtctca
tgccacaatttgaagagagtgttaattgttgattgggatatccatcatggaaatggaaca
cagtctattttagaaaacgattcgtcgattttatatatttctttacatcgttatgacaat
ggcagtttcttccctcattccaaagcagctaactacaatgtagtaggtactggtaaggga
gaaggattcaatgtaaatattccttggaataagaggggaatgggtgatgctgaatacatc
gcagcctttcaacaggtggtaatgccgatcgcttatcaatacaatcctgagttagttcta
gtctcagcaggctttgatgcttgcattgctgatcctttaggcggctgcaaagtcagtccc
gagatgtacggacacatgacgcattggctttcgtctctagcaaatgggcgaataatcctt
accttggaaggtggctataacgtgaattcaatcagccacgcaatgacaatgtgcactaaa
gcattactaggtgatcctttggtgcccttggatgcgcatcaggttgcctgcccgagcgcg
gtagcttccatcaacaacgtcctccaaacgcacaaacagtattggccaaatttggttttt
caaaaggcattacctcaagagaatgtgcttccaaaagctcgagtgccacgagctaagcca
actgaacgtttgagcacgcgcgagaattttccgagtcttccacacaacggcgatcctgag
caagaacccgagcgtaatcaatcgcagccagaagattctaccgagcaaattttgcaactt
gagattcatctggataatttatcgattagagaatgcgttaatcctgataagaagaaagag
gattttagtaatccaggaggaagctcaacgggtggtagttccggcacagatcagccggga
acttcttcgcaaggatcgactagtgaaactctggcagattatctacaagacaatcttcag
gcactgttagccgaagaaatgttcgccgtgattccacttagtgattgtccacatttgggc
tcagtcaaagaagttccagcttccggtattgacgtaaatagcccttgtgtggagtgttca
agtactgttgaaaattggatttgtctcgaatgttacacagtacactgcgctcgtaatatc
aatcaacacgcattgctacatgaacagtccactcaacatccactaactctaagttttaat
gatgtatcggtttggtgttatggttgcgaggcttatatagataatccacgtttatatgca
gcgcgaaatgccgtccatatcggtaaatttcacacagaattaccatggacttattcagac
aatgctggaagctcaagttaa
DBGET
integrated database retrieval system
