Neogale vison (American mink): 122899580
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Entry
122899580 CDS
T08764
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03013
Nucleocytoplasmic transport
nvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122899580 (SRRM1)
03015 mRNA surveillance pathway
122899580 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122899580 (SRRM1)
03041 Spliceosome [BR:
nvs03041
]
122899580 (SRRM1)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122899580 (SRRM1)
Spliceosome [BR:
nvs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
122899580 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
122899580
NCBI-ProteinID:
XP_044093380
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All DBs
Position
2:18179963..18211424
Genome browser
AA seq
921 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRMQMGKRWQSPVTKSGRRRRSPSPPPARRRRSPSPAPPPRRRRSPTPPPRRRTPSPPP
RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSS
PVTKRRSPSLSSKHRKGSSPSRSAREPRSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS
SPQRRQSPSPSTRPIRRVSRTPEPKKTKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPA
PQSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEGGGKKKKKKKDKKHKKDKKHK
KHKKHKKEKAVAAAAAAAAAAVTPAAPTAPTTTSAQEEPEAEPEPKKETESEPEDNLDDL
EKHLREKALRSMRKAQVSPQS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcagagcaggataatcggttcagcaataaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcccctcctcttaagtgcacaagaaaacatcgctggaatccct
tctgcttttctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcttctatgaaaaagcaagatgaagacaaggataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggagaggtctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
actagtgacatcctgaaagttcccaaacctgaacctgtaccagagcctaaagaaccttct
ccagagaaaaattccaaaaaagaaaaggagaaggagaagacccgacccagatctcggtca
cgttccaaatcaagatcccggacacggtctcgctctccttctcatactcgacctagacga
cgtcatagatcccgatcaaggtcatactcacctagaaggaggccaagtccgagaaggcgg
ccatctcctcgaagaagaaccccaccaagacgaatgccacctccacccaggcatagaagg
agtagatctccagtgagacgaagaaggcgttcatcagcatccttgtctggaagtagctca
tcatcctcttcgtctcgttcccggtcaccgccaaagaagcctcctaagaggacatccagc
ccccctcgaaaaactcgtaggttatctccttcagcgagtcctcccaggcgaaggcatagg
ccatcacctccagcaactccaccgccaaaaactcgtcattccccaacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgaca
aaacataaaggtactgagaaaagagagtccccttcaccagcacctaagcctagaaaagta
gagttatctgaatcggaagaagataaaggtggcaaaatggctgcggcagattctgtgcag
cagagacgtcaatacagacgacagaaccagcagtcttcatctgattctggctcctcttct
tcctcagaagatgagcgacccaagaggtcccatgtgaagaatggtgaggtaggcaggcgg
cggagacattccccttcccggagtgcctctccatcacctcgaaagcgccagaaggagact
tcccctcggatgcaaatgggaaagcgatggcaatcgccagtgactaaaagtggtagacgg
aggaggagtccctccccaccacccgccagaaggcgacgttctccttctcctgcccctcct
cctcgtaggcgcaggtctcccacgccgccaccacgacgaaggactccttctccaccaccc
cgccggcgctcaccttctccaagaagatactctcctccaatacagaggagatattctcct
tccccgcctccaaagagaagaacagcttctccccctccccctcctaaacgaagggcatca
ccatctccaccaccaaagcgtcgggtctcccattctccacctcccaaacaaagaagctcc
ccagtcaccaagagacgttcgccttcattatcatcaaagcataggaaagggtcttccccg
agccggtctgcgcgtgagccccggtcaccacaaccaaacaaaaggcattcgccctcacca
cggcctcgagctcctcaaacttcctcaagccctccacctgttcgaagaggagcgtcgtca
tcaccccaaagaaggcagtccccttctccaagtactaggcccattaggagagtctccagg
actccggaacccaaaaagacaaaaaaggctgcctcaccaagccctcagtctgtaaggagg
gtctcgtcctcccgatctgtctcaggatctcctgagccagcagctaaaaagcccccagca
cctcagtctcctgtccagtcccagtccccctcaaccaactggtcaccagcggtaccggtc
aaaaaggctaaaagcccaacaccaagcccatctccagcaaggaactcagacccagaagga
ggtgggaagaagaagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaag
aaacacaaaaaacacaagaaggaaaaggccgtggcggcagctgcagcagcagcagcagca
gctgtcacccctgcggcccccactgcccccacgaccacatcagcacaggaggaaccggag
gcagagcccgagcctaagaaggagaccgaaagcgagcctgaagacaacctcgacgactta
gaaaagcacctgcgtgaaaaggcgctgagatcgatgcggaaggctcaagtgtccccacag
tcttag
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