Nitrosococcus watsonii: Nwat_3067
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Entry
Nwat_3067 CDS
T01266
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nwa
Nitrosococcus watsonii
Brite
KEGG Orthology (KO) [BR:
nwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwa03032
]
Nwat_3067
03400 DNA repair and recombination proteins [BR:
nwa03400
]
Nwat_3067
Enzymes [BR:
nwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Nwat_3067
DNA replication proteins [BR:
nwa03032
]
Prokaryotic type
DNA Topoisomerases
Nwat_3067
DNA repair and recombination proteins [BR:
nwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Nwat_3067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ADJ29786
UniProt:
D8KCB5
LinkDB
All DBs
Position
complement(3253503..3255854)
Genome browser
AA seq
783 aa
AA seq
DB search
MSKNVVVVESPAKAKTIKKYLGKNFEVLASYGHVRDLMPKEGAVDPEHGFKMKYQAIEKN
GRHVNAIAKALKSADSLLLATDPDREGEAISWHLLELLKEEGVLEDKAIQRVVFYEITSQ
AVNEAVAHPRDISLDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
EREKEIDAFKVREYWTLEADAAAAKQPFVAKLTHLDGRKLTQFDIENKDQALALVERLTK
AAAGELWVIKVERKQRRRNPAAPFITSTLQQEASRKLGFSAKRTMSVAQQLYEGVDIGDG
AMGLITYMRTDSVNLANEAVGEIRNFIAERFGQNSLPVKSRTFKTRAKNAQEAHEAVRPT
SVYRVPEALKPYLKPEQFKLYQLIWRRTIACQMNHATIDAVAVDLDTQKAAPERGEDARG
NIFRATGSTVVDPGFMAVYQEGRDDAKGEEEQRKLPPMKEGDRVALLQIRPEQHFTEPPP
RYTEASLVRALEEFGIGRPSTYATIISTLQQRDYTVLESKRFQPTDVGRVVNRFLTEHFN
PYVDYDFTARLEDELDAISRGEKVWIPVLEEFWGPFSARIQEKEQNVSREEAVQARELGV
DPQSSRPVSVRMGRYGPYIQIGSKEDEEKPRFAGLQPGQKMDAITLEEALALFKLPRELG
FTPGGERVSVNIGRFGPYVKYDNKYVSLRGEDPHTIPLERALVLIEEKRQADANRVIKVF
PDSGIQVLNGRYGPYVTDGERNVRVPKEQAPEELSLEQAQTLIHEAPVKRARRKAGSRKK
AKG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaatgtggttgttgtggagtccccagccaaagctaaaactattaagaaatat
ttggggaaaaactttgaagtgctggcttcctatggacacgtgcgggatttgatgcccaag
gagggcgcggtcgatcctgagcatgggtttaaaatgaagtatcaggccattgaaaagaat
ggtcgtcatgtaaatgctattgccaaggcattgaaaagtgctgattctcttcttcttgcc
actgatccagatagggaaggggaggcgatttcttggcaccttctcgagcttcttaaggag
gagggggtcttggaggataaagctatccagcgagtagtgttctacgaaattacctcacag
gcggttaacgaggctgtcgctcatcctcgtgatatttccttggatttggttaatgcccag
caggcacggcgcgctttagattatctggtagggtttaatctctctccgctactctggaaa
aagattcgccgcggcctgtctgctggacgggtacaaagcccagcactgcgtttaatctgc
gagcgggagaaagagatagatgcctttaaagttcgagagtattggacgttggaggcagat
gcagcggcagccaagcagccatttgttgccaaactaacccatttggatggtagaaaacta
acccagtttgatattgaaaataaagatcaggctttggcgcttgtggaacggctgaccaag
gcggcagcaggcgagttgtgggtgatcaaggtagagcgtaagcagcgccgccgcaatcca
gcagcacccttcattacttccacgttacagcaggaagcctcccgtaagcttggtttttct
gctaagcggactatgagcgtagcccaacagctctatgaaggggttgatattggggatggg
gcgatgggcttgattacttatatgcgaactgattcggtcaatctggcgaatgaggccgtg
ggagaaattcgcaatttcattgcagagcggtttggacaaaatagcttaccggttaaatcg
aggacctttaaaacccgggccaagaatgctcaagaagcccatgaagctgtccggcctacg
tcggtataccgggttcccgaggcactcaaaccctacctaaaacccgaacagttcaagctt
tatcagcttatttggcgccgcacgattgcttgccagatgaatcatgccaccattgatgct
gtggcggtagatttggacactcaaaaggcagcgccagaaaggggagaggatgcccgcggc
aatattttccgggctaccggttcgacggtggttgatcccggctttatggccgtatatcag
gaaggtcgggatgatgccaagggggaagaggaacagcggaagttgcctcccatgaaggaa
ggagatagagtagcgctgttacagatacgcccggagcagcatttcaccgagccgccaccc
cgctataccgaggctagtctggtgcgtgccttggaagaatttggtattgggcgcccatct
acatatgccactatcatttcaaccctccagcaacgggattacactgtcttggaaagcaag
cgtttccagccaacggatgtgggacgggtcgttaaccgctttctgacggagcattttaat
ccttatgtagactatgatttcaccgctcgcttagaagatgaactagatgccatttctcgt
ggggagaaagtgtggattccagtgttggaggaattttgggggccattttctgcacggata
caagaaaaagaacaaaacgttagtcgggaagaagccgtccaggctcgggaattaggagtt
gatccccaaagtagccgtccggtatcggtgcgcatgggacgttatggaccttatatccag
attggttccaaggaggatgaagaaaagccccgctttgccggtttgcagccaggccaaaaa
atggatgctatcaccttagaagaagcgttggcattgtttaaattaccgcgagagctggga
tttacaccgggaggcgaacgagttagcgttaatattgggcgctttgggccttatgtaaaa
tacgataataaatatgtttctctgcggggagaagatccccatactattcctttggaacgg
gcgctagtgcttatcgaggagaagagacaggctgatgctaatcgggtgattaaggtgttt
cccgatagtggaattcaagtgcttaatgggcgttacggcccttatgtaactgatggcgag
cgcaacgtccgcgttcccaaggagcaagcgcctgaggagcttagtctggaacaagcgcaa
acccttatccatgaagcaccggtgaaacgagcgcgccgtaaagctggaagccggaagaaa
gctaaaggctga
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