Nematolebias whitei (Rio pearlfish): 119421867
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Entry
119421867 CDS
T08042
Symbol
ubtf
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nwh03000
]
119421867 (ubtf)
03021 Transcription machinery [BR:
nwh03021
]
119421867 (ubtf)
Transcription factors [BR:
nwh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
119421867 (ubtf)
Transcription machinery [BR:
nwh03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
119421867 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
119421867
NCBI-ProteinID:
XP_037545158
LinkDB
All DBs
Position
15:42360963..42374043
Genome browser
AA seq
739 aa
AA seq
DB search
MNGEMEVATQDQVWAQDDLLKLLEAMKVALPQKDLTKYKTSESHLDWQKVAFNSYTAEMC
KQKWQEVSKEIRKFRTLTELIFDAQDYIKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYRELPDKKKKKYVDDFLRDKESFVQSMMRFREEHPDLME
SMTKKGSNVPEKPKTPQQLWYNHEKKAVLKSHPDATTKDIKDSLGKQWTQLSDKKRLKWI
AKSLEQQKLYKEAMREYIQQHPELNMTQDLAKSTLTKAERHLKDKSDGRPDKPPPNGYSM
FCAELMSSMKDVPSTERMVMCSQRWKLLKQNEKDAYQKRCEQRKREYEIDMNKFLSTISE
EEQQRVLGEEKPGFKKISGASSSASKKKNAQTKASSEKPKRPISAMFIFAEEKRPKLQQE
RPDLSDSELMRFLARMWTELPDKKKEKYKRLEMVLKAESEKKEREDRSRLPDPPKTAQEI
WQQSVIGDYLARFKSDRPKAQKAMEIVWSSMEKKEKIMWIKKAAEDQKRYERDLCEMRSP
AANVVSMKKMKFEGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMTEIGSRWQRCPQKE
KDRYRKIAEEKQRQYKVLLEQWLASLSSQERNAYREYNSQKRRIRAKPGAPQAKKAAVEQ
DDDDDEEEEDDDDDEQEKASSEADSSSEEDDDDDDDNDGNDDDDDDDDDDDDEVEDKENK
SEDSSSESNSAESSDSDSD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaatggaggttgcgacccaagaccaagtgtgggcgcaggacgacctccta
aaactgctggaagccatgaaagtggctctgccgcagaaagacctgacaaaatacaaaaca
tcagagtcccacctggactggcagaaggtggccttcaactcctacacagcagagatgtgt
aagcagaaatggcaggaagtctctaaagagattcgtaaattcagaacgctgacggagttg
atctttgacgctcaagactacattaaaaacccttataaaggcaaaaaactaaagaagcat
ccagacttccccaagaagcctttgactccatatttccgcttcttcatggaaaaaagagcc
aaatatgcaaagttgcaccctgagatgagcaacttggatctcactaaaatactgtccaag
aagtacagggagctgcccgacaaaaagaagaaaaaatatgttgatgacttcctgcgtgac
aaggaatcgtttgtacagagcatgatgaggttcagagaagaacatccggacctgatggag
agcatgaccaagaaaggttcaaacgtcccagaaaagcccaagacgccccaacagctgtgg
tacaaccatgaaaagaaggccgtcctcaagtcgcacccagatgccaccaccaaagacatt
aaggacagtcttggtaaacagtggacacagctgtctgacaaaaagaggctcaaatggatc
gccaagtccctcgaacagcagaaactgtacaaggaagcaatgcgggaatacatccagcag
caccccgagttaaacatgacacaagatctcgcgaagtccaccctgaccaaggcggagcgg
caccttaaagacaagtctgacggccggcccgacaaacctcctccgaacggttattctatg
ttctgcgcggagctgatgtcgagcatgaaggacgttcccagcacagagcgcatggtgatg
tgcagtcagaggtggaagctgctgaagcagaatgaaaaggacgcctaccagaaacgctgc
gagcagaggaaaagggagtatgaaatcgatatgaacaaatttctcagtaccatatcagaa
gaggagcagcagcgagttttgggtgaagagaagccgggttttaagaagatcagtggagcc
agcagttccgcctctaaaaagaaaaatgctcaaacgaaggccagttcagagaaacccaaa
aggcccatttctgccatgttcatattcgcggaggagaagcgtcccaaactgcagcaggag
cggccggacctctccgacagtgagctcatgagattcttggcacgaatgtggaccgagcta
cctgataagaaaaaggagaagtacaagcgtttagaaatggtgctaaaagctgagtcggag
aagaaggagagggaggatcgaagtcgtttgccggatccgcctaagacggctcaggagatc
tggcagcagagcgtcatcggagactacctggccaggtttaagagtgatcgcccgaaagca
cagaaagcgatggaaatagtctggagctccatggaaaaaaaggagaagattatgtggatt
aaaaaagcagcagaggaccagaaaagatacgagagggatctgtgtgagatgcgctctcca
gctgcaaatgttgtatcaatgaagaagatgaagtttgaaggagaacccaagaaaccacca
tcgaacggatatcagaagttctcccaggagatgctgtccaacggggagctgaaccacctc
cccatgaaggagcggatgactgaaatcggcagccggtggcagaggtgtccgcagaaagag
aaggaccgttacagaaagatcgcagaggagaagcagaggcagtacaaagttctgctggaa
cagtggctcgctagcttatcttcacaagagcgaaacgcttacagagagtacaactcccaa
aaaagaagaatccgagccaaaccgggagcccctcaggcaaagaaagctgctgtagagcag
gatgatgacgacgatgaagaagaagaggatgacgacgatgacgagcaggagaaggcttcc
tctgaagcggactcatccagtgaggaggatgatgatgacgacgacgataatgacgggaat
gatgatgacgacgacgatgatgatgacgacgatgacgaggtggaggacaaagaaaacaaa
tctgaggacagcagcagcgagtcgaactcggcagaatcgtccgactcggattcagactga
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