Nematolebias whitei (Rio pearlfish): 119422311
Help
Entry
119422311 CDS
T08042
Symbol
rnf111
Name
(RefSeq) E3 ubiquitin-protein ligase Arkadia
KO
K10635
E3 ubiquitin-protein ligase Arkadia [EC:
2.3.2.27
]
Organism
nwh
Nematolebias whitei (Rio pearlfish)
Brite
KEGG Orthology (KO) [BR:
nwh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nwh04121
]
119422311 (rnf111)
Enzymes [BR:
nwh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119422311 (rnf111)
Ubiquitin system [BR:
nwh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119422311 (rnf111)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF111_N
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
Mcm10
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
119422311
NCBI-ProteinID:
XP_037545582
LinkDB
All DBs
Position
2:complement(5918437..5943541)
Genome browser
AA seq
1017 aa
AA seq
DB search
MKSEVPSEATSRREHLKEPLVNPESIEEAKNFPSNMEVIGKAGSDFETLCESRHRALRDT
GSHRDPDRSLPGRRKRKGQQAGPSDCSLKEDHISENSLAPQRARIDLLEHPSEDEQNNES
SFSDCASSPSSSLRFGDSDTLSSDDEGEAGATVEQQKTPALPTGGTTGVGLRPNLSRTRG
SRSHKWVRSEAEPMLLKRPCLNSRRPLHRKRFVKTAPGGGQLTQKQKERLLLQRKKRQVI
AQRKYALLHNSSSSSEELSSDSSSPSSTEVDDELYVDVSSTSSQPNSATVATGALDEDVV
VIETSPAPVPVVPASEEINVTSTDSEVEIVTVGDGFRSRSVGGLGRIWASSCSQNRLQEP
RGRHRLSTVIQPLRQNAGEVVDLTVDEDDLSVVPTTSSSIHSQTVRSSSSSSSHHASTSE
LHDAPGPSTSCAGSIPESVHAQRPSGSACTTADDDNRPGLSGTGGENSGTTMPRLPSCCQ
QHSPCGGPAPAHLSLSLSHSSCLQASSSQRGGGSQHSHSNTHHFVHHIHHPAPQPPGTLP
FQEPSCPVERPSALPAPCAGVSGSSNAAHYHDQQTLPVDLSNSSVRSSGTSGASFHGSTS
AFDPCCPGSTSRPPAYVSHATPGPSQPAVVDSFGSSMVAQPQTQPQPCRHYMHPSYGSLT
RSLHHQPSSACPHSHGNPQLSAQPPPQGEFLIPHNFHTPLSSHPPGHAVTPAPPPPLSSH
HLSNSSAPLAQHLSTDHQTLPHHLPPLGPSVQRLHQHEMLQRMEVQRRRMMQHPTRAHER
PPPHPHRMHPNYGHGHHIHVPQTMSSHPRQPEQRTTWELGIEAGVPVVPYTSGHLHPHLP
HYHAPPRLHHFPISIMHTGISEVTYPHIRYISSRMTGFERTYEDLLHLEERLGTVNRGAS
QGTIERCTYPHKYKKKVLERDIDQQLTPEAWASIGKNMHATSESRKLHGKQDEDEGADED
TEEKCTICLSILEEGEDVRRLPCMHLFHQLCVDQWLLTNKKCPICRVDIEAQLSAES
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgaggtgccgtctgaggctactagcagacgggagcatctgaaggagccactg
gtgaacccagagtccatagaggaagccaagaacttccccagcaacatggaggttattgga
aaggctggcagcgattttgaaaccctgtgtgagtccaggcatcgggccttgagggacacg
gggtcccacagagacccagataggagcctgcctgggcgcagaaaaagaaaaggccaacag
gcagggccgtcggactgctctctaaaagaagaccacatcagtgagaattcactggcacct
cagcgtgccaggatagaccttttagagcatcccagtgaggatgaacagaacaatgagtcc
tcttttagtgactgcgcttcctccccttcatcaagcctgcggtttggggactcggacact
ctcagttcagatgatgagggggaagctggagcaacagtggagcagcaaaagactcctgcc
cttcctacagggggaaccactggagttggcctgcgccccaatttgagtcgaactcggggc
agtcgttcccataagtgggtgcggtctgaggctgagccaatgttgctgaagcggccgtgt
ctgaacagccggcggcctctgcataggaaacgctttgtgaaaaccgctcccggaggaggt
cagctgactcaaaagcagaaagagcggcttctactgcagaggaagaaacgtcaagtgatt
gcacagaggaaatatgctctgctccataacagtagtagttccagtgaggagctaagcagt
gactcatcctccccttcttctaccgaagtggatgatgagctgtatgtagatgtgagcagc
accagcagccagcccaacagtgctactgtagcaacaggtgctttggatgaggacgtggtt
gtgatcgagacgtctccggcaccagtacctgttgttcctgcaagtgaggagataaatgtc
acttcaacggacagtgaggtggagattgtcacagtcggagatggattcaggtcacgctca
gtggggggtcttggcaggatttgggccagtagttgctcccaaaatcgtctccaggagcca
cgtggacgtcacagactctccaccgtcatccaacccctgcgtcagaatgctggggaggtg
gtggatctcactgtcgatgaggacgatctctctgttgtgccaacaacttctagcagcatt
cactctcagactgtgaggtcgtcatcttcatcgtcctcccatcatgcctctacctctgag
ctccatgatgccccgggcccttccactagctgcgcaggttcaatacctgaaagtgtgcac
gcacagaggccaagtggttctgcttgcacaactgcagatgatgacaacagaccaggtttg
tcaggtacaggaggagaaaactcgggcacaaccatgcccaggctcccatcctgctgtcag
cagcactccccctgcggaggccccgcccctgctcacctgtctctgagcctctcccattca
agctgcttgcaggcgtcatcctctcagcggggcggtggctctcagcacagccacagcaac
acgcaccactttgtccaccatatccatcaccctgcaccccagcctcccggcactctaccc
tttcaagagcccagctgcccagtggaacggcccagtgctctgcctgctccctgcgctggg
gtcagcggcagcagcaatgcagctcactaccatgaccagcaaacgctgccagtagatctg
agcaacagcagtgttcgaagcagtggaaccagtggggctagtttccatggcagcacttca
gcctttgacccctgctgcccaggctccacctcacggcctcctgcttatgtttcacatgcc
acccctgggcccagccaaccggccgtagtggactcatttggctcctccatggtggctcag
ccacaaacgcaaccccagccctgcagacattacatgcacccatcctacggctctctaaca
cgatcgctgcatcatcagccctcctctgcctgccctcattcccatgggaacccccaactt
tccgctcagcctcctccacagggagaatttctcattccccacaacttccatacgccactg
tcatcccacccgccaggccacgccgtgacccctgcccctccccctcctctgtcttcccac
cacctctccaactcaagcgccccgcttgcccagcacctttctacggaccaccagaccctg
ccgcaccacctgccacctctggggccttcggtgcagcggctccatcagcacgagatgctg
cagaggatggaggttcagaggcggcggatgatgcagcaccccacgcgagcacatgagcgt
ccgcccccacaccctcacaggatgcaccccaactacggccacggacaccacatccacgtg
ccacaaactatgtcttcccatcctcggcagcctgagcagagaacaacatgggagctcggc
atcgaggctggtgttccggtggtgccgtacacttcagggcatctgcacccccacctgccc
cactatcatgctcccccaagactgcaccatttccccatctccatcatgcacactggcatt
tctgaagtgacctacccgcacattaggtacatctcatctagaatgactggctttgaaaga
acctacgaggacctgctacatttagaagaaagactggggactgtgaacagaggggcctct
cagggaaccatagagaggtgcacctacccacacaagtacaaaaagaaggtgttggagaga
gacattgaccaacagttaacccctgaagcttgggcatctattgggaaaaatatgcacgca
acctcagaatcgagaaagctgcacggtaagcaagacgaagacgagggagcagatgaagac
acggaagaaaaatgcaccatctgtttgtcgatactggaggagggggaggacgtcaggcgc
ctgccgtgcatgcacctcttccaccagctgtgcgtggatcagtggctgctcaccaacaag
aagtgccccatctgcagagtggacattgaggcgcagctgtctgccgagagttga
DBGET
integrated database retrieval system
