Niabella yanshanensis: U0035_09935
Help
Entry
U0035_09935 CDS
T09723
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nyn
Niabella yanshanensis
Pathway
nyn00550
Peptidoglycan biosynthesis
nyn01100
Metabolic pathways
nyn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
U0035_09935 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
U0035_09935 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nyn01011
]
U0035_09935 (mrdA)
Enzymes [BR:
nyn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
U0035_09935 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nyn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
U0035_09935 (mrdA)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
T6PP_N
Motif
Other DBs
NCBI-ProteinID:
WQD40466
LinkDB
All DBs
Position
complement(2443990..2446125)
Genome browser
AA seq
711 aa
AA seq
DB search
MSVFNQSRSYIIRAIFLAVFIVILAQLVNLQIFGRKYHQLARDNAVFAKIVYPERGIIFD
RKGKPILNNVIMFDLMVTPAEVKNIDTSAFCRLMNIDTAEFRQKIVEAVVKNTRVRPSIF
MSLLTPEMQARFEENGWRFSGFNLVARPVRSYPFNVGAHILGYISEADQRDIERSGGFYR
MGDYRGKNGLEYTYEKVLMGQRGIEYMIKDNKNRLVGHFENGDFDTMAVAGRGLKTHIDV
ELQALAEKLISNKVGAAVAIDPKTGGILAMASGPTFNPNDLTGPEFKKNYQKMNLDVASP
LLNRGIQGRYPPGSTFKPLGGLVALDEGVITPAFGYPCGGRYFSCGAGKPACTHAGGGHA
ANLRAAIANSCNSYFVDVYRKVVDNRKYGNTKKGYEVWEDYMNLFGLGVRLGVDVPSENM
GNIPTVAVYDKEYRGSWNSCTNLTLGIGQDKMLATPLQLANAMCIIANRGYYYTPHFVDS
LENETIADSAFMNKYRTRHDALTHISDTAFSATINGMQDVVTHGTARNVRIPGINVCAKT
GTAQNSRIIGGKKWDLPHNAMFVCFAPKEDPKICVAVVVESGGYGGSSAGPIARLMMEKY
LFDTLSTKSLADAERTANVNLMPPYLPRLQYLTDSARAYQWLKDYKDSSMILKFRGRGRA
TADSAAKRKKLDEERKKEEQQKKANQRIAAAVAILTEPKKNSQPSKATYTA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtattcaatcaatcgaggagttatatcatacgcgccattttcctggccgttttt
attgttatccttgctcagttagttaacctccagatctttggccggaaatatcatcagctg
gcccgggataatgctgttttcgcgaagatcgtataccccgagcgtggtatcatcttcgat
cgtaaagggaagcccatcctgaacaatgtaatcatgtttgacctgatggtaacgcctgcc
gaggtcaagaatattgatacatcagctttttgcaggctaatgaatatagatacggctgaa
ttcagacaaaagatcgtagaggcagtggttaagaatacgcgggtaagaccatccatattt
atgtcgctgctgacccctgaaatgcaggcgcggttcgaagagaatggctggcggttttcc
ggctttaacctggtagcccgcccggtaagatcttacccctttaatgtgggcgcacatatc
ctaggatatatcagtgaagctgatcagcgggatattgaacgttcgggcggattttaccgt
atgggcgattaccgcggtaaaaatgggttggaatatacttatgaaaaagtgctgatgggc
cagcggggtattgaatacatgataaaggataacaagaaccggctggtaggtcacttcgaa
aacggagattttgacaccatggcggttgcaggtcgtggattaaaaacgcatattgatgta
gaattacaggcacttgccgaaaagttgatcagcaataaagtaggtgcggcggtagccatc
gaccctaaaacgggtggcatcctggccatggcttcagggcctacattcaatcctaatgac
cttactgggcctgagttcaaaaagaattaccagaagatgaacctggatgtagcgtcgcct
ttgttaaacaggggcatacaggggcgctatcctcctggttctacattcaagcccctgggc
ggcctggtagctttggatgaaggcgtgatcactcccgcctttggctatccttgcgggggg
cgttatttttcctgcggtgcgggaaagcccgcctgtacccatgccggtggagggcacgca
gctaatctcagagccgccatcgctaattcctgcaactcttattttgtagatgtataccgg
aaggtggtggacaaccgcaaatacggcaacaccaaaaagggatacgaggtttgggaagat
tatatgaatttgtttggtttgggggttcgcctgggtgtagatgtacctagtgaaaacatg
gggaatatcccgacagtagctgtttacgacaaagaataccggggttcctggaactcctgt
actaacctgacactgggcattgggcaggacaaaatgctggctacccctttacagctggcc
aatgccatgtgcattattgccaaccggggctattattatacgccccattttgttgacagc
ctggagaatgaaactattgccgattcggcatttatgaataaatatcgtacccgtcatgat
gcgttgacgcatatttctgatactgcctttagcgccaccatcaatggtatgcaggatgtg
gttactcatggtacagcccgtaatgtaagaataccgggtatcaatgtttgtgcaaaaacc
ggtacggctcaaaactcccggatcattgggggtaagaaatgggatctgccgcataatgcc
atgttcgtttgttttgctcccaaagaagatcctaaaatttgtgttgctgtagtggtagaa
agtggcggttatggtggttcatctgctggtcccatagcccggttgatgatggaaaaatat
ttatttgataccttaagcacgaaaagcctggccgatgcagaaagaacagcgaatgtaaac
ctgatgcctccttatttgccccgcctgcaatatttaacagactctgcgcgggcctaccag
tggttgaaggattacaaggatagcagcatgatcctgaaattccgcggccgtggcagagcc
actgccgacagtgcagcaaaacgtaaaaaactcgatgaggaaaggaaaaaagaagagcag
cagaaaaaagcaaatcaaagaatagcagcagcggtagcaattttaaccgagccaaagaaa
aattcccaaccttccaaagctacatatacggcatag
DBGET
integrated database retrieval system
