KEGG   Ornithorhynchus anatinus (platypus): 100086791
Entry
100086791         CDS       T01045                                 
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
oaa  Ornithorhynchus anatinus (platypus)
Pathway
oaa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100086791 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oaa03400]
    100086791 (LIG3)
Enzymes [BR:oaa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     100086791 (LIG3)
DNA repair and recombination proteins [BR:oaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100086791 (LIG3)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C RNA_ligase BRCT_2 mRNA_cap_enzyme DGF-1_C
Other DBs
NCBI-GeneID: 100086791
NCBI-ProteinID: XP_028938172
Ensembl: ENSOANG00000050784
LinkDB
Position
17:complement(2560208..2573787)
AA seq 991 aa
MRWAFPASLLVRRTVGAPGPPAPRPGAMAEQRYCVDYAKRGTAGCKKCKDKIAKGACRIG
KVVPNPFSESGGDMKEWYHVRCVFEKLERARAATKKIEDLTELEGWEELREPERGHIRQL
VADLASKTAGTPKKKATVQAKLTASGEVVSPRKGVAPVTDGNPRKFSGFTAKPGPGPDAP
SGSAAPGPAARRCDRTHRDCLLREFRKLCAMVADKPGYNAKTQIIQHFLQKGAGGDGFHG
DVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFQCSQEDMVRDLEQGDVSETVRIFFEQS
RSFPPAAKSLLTLQEVDEGLLRLSKLTKEDDQQNLLRDLASRCTANDLKCIVRLIKHDLK
MNSGAKHVLDALDPNAYEAFKASRDLRDVVERVLRNQREAEKGPGLRRTLSVQASLLTPV
QPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKSGDHFSYFSRSLKPVLPHKVAHF
KDYIPRAFPGGHSMILDAEVLLIDTNTGKPLPFGTLGVHKKAAFQDAKVCLFVFDCIYFN
DVSLMDRPLQERRRFLQDNMVEIPDRILFSEMKHVTRASDLADMINRVIREGLEGLVLKD
VKSTYEPGKRHWLKVKKDYLNQGAMADTADLVVLGAFYGQGNKGGMMSIFLMGCYDPRAQ
RWCTVTKCAGGHDDATLARLQKELDVVKISKDPGKIPAWLKINKIYYPDFIVPDPKRAPV
WEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLQQLKELYQLSKEKADFTVT
APEEGGSGSGGEEEGDSGPSPPPRAAETAAGEPPAGKSPGRPGAARSGEGEDGAYPSSRP
GTARGRRGGACGRTRSVGSRLGGRPGAEAASCPSPPEPAPLHPPGAAVRSSAEKAPEPRG
VKRRAPEDGEGRAETLLDIFTGVRLYLPPSTPDFGRLRRYFVAYDGDLVRESDAASATHA
VGAGDGSPAARRVSPEWIWACVRKRGLVAPR
NT seq 2976 nt   +upstreamnt  +downstreamnt
atgcggtgggcgttcccggcctcgctcctcgtccggcggaccgtcggagcccccggcccc
ccggccccccggcccggcgccatggcggagcagcgctactgcgtggactacgccaagcgg
ggcacggccggctgcaagaagtgcaaggacaagatcgccaagggcgcctgccgcatcggc
aaggtggtgcccaaccccttctccgagtcgggcggcgacatgaaggagtggtaccacgtc
aggtgcgtgttcgagaagctggagcgcgcccgggccgccaccaagaagatcgaggacctg
acggagctggagggctgggaggagctgcgcgagcccgagagggggcacatccgacagctg
gtcgcagatctcgcctccaagaccgcgggcacccccaagaagaaggccacggtccaggcc
aagctgaccgcctccggggaggtcgtgtccccgcggaagggagtcgcccccgtgaccgac
ggtaacccccgcaagttctccggtttcacggccaagcccggcccggggcccgacgccccc
tccggctcggccgcccccggcccggcggcccggcgctgcgaccggacccacagggactgc
ctgctgcgcgagttccgcaagctgtgcgccatggtggccgacaagcccggctacaacgcc
aagacgcagatcatccagcacttcctgcagaagggggcgggtggagacggattccacggc
gacgtgtacctgacggtgaagctcttactgccgggcgtcatcaagagcgtttacaacctg
aacgacaagcagatcgtgaagctgttcagccgcatcttccagtgcagccaggaggacatg
gtgcgggacctggagcagggagacgtctcggagacggtgcgcatcttcttcgagcagagt
cgctccttcccgccggcggccaagagcctgctgacgctgcaggaggtggacgaggggctg
ctgcggctgtccaagctgaccaaggaggacgaccagcagaacctgctgagggacctcgcc
tccaggtgcacggccaacgacctcaaatgcatcgtgcggctcatcaaacacgacctgaag
atgaactcgggggcgaagcacgtgctggacgccctggaccccaacgcctacgaggccttc
aaggcgtcccgcgacctccgcgacgtggtggaacgcgtcctgcgcaaccagcgggaggcc
gagaaggggccgggcctccggcggacgctcagcgtgcaggcctcgctcctgacccccgtg
cagcccatgctggccgaggcctgcaagtccatcgagtacgccatgaagaagtgccccaac
ggcatgtactcggagatcaagtacgacggcgagcgggtccaggtgcacaagagcggcgac
cacttcagctacttcagccgcagcctcaagcccgtcctcccccacaaggtggcccacttc
aaggactacatcccccgggccttccccgggggccacagcatgatcctcgatgccgaagtg
ctgctcatcgacaccaacacgggcaagcccctgcccttcggcaccctcggggtgcacaag
aaagccgccttccaggatgccaaagtctgcctgtttgtgttcgactgcatctacttcaat
gacgtcagcttgatggacaggcccctgcaggagcggcggcggttcctccaggacaacatg
gtggagatccccgaccgcatcctcttctcggaaatgaagcacgtcacgagagcgtcggac
ctggccgacatgatcaacagggtgatccgggaagggctggagggcctcgtgctcaaggac
gtcaagagcacgtacgagccgggaaagcggcactggctgaaagtgaagaaggactacctg
aaccagggcgccatggccgacacggccgacctggtggtcctcggcgccttctacgggcag
gggaataaaggcggcatgatgtccatcttcctcatgggctgctacgacccccgggcccag
cggtggtgcacggtcaccaagtgcgccgggggccacgacgacgccaccctcgcccgcctc
cagaaggagctggacgtggtcaagatcagcaaggaccccggtaagatccccgcctggctc
aagatcaacaagatctactaccccgacttcatcgtgcccgatcccaagagagcgcccgtg
tgggagatcaccggcgccgagttctccaggtccgaggcccacacggccgacggcatctcc
atccgcttcccccgctgcacccgcatccgcgacgacaaggactggaagtcggccaccaac
ctccagcagctcaaggagctgtaccagctgtccaaggagaaggccgacttcaccgtgacg
gccccggaggagggcggctcgggcagcggcggggaggaggagggcgattcgggaccctcc
ccgcccccccgggccgccgagacggcggccggcgagcccccggccgggaaatctccgggg
agaccgggcgccgcccggagcggagagggtgaggacggcgcctacccgtcgtcccgtccc
gggaccgcccggggccggagggggggtgcgtgtggccggacgcgttccgtgggatcgcgt
ctcggggggaggccgggagccgaggccgcctcgtgcccatcgccccccgagcccgcgccc
ctccaccccccgggcgccgccgtgagatcctccgcggagaaggcgccggaaccgcgaggg
gtgaagcgaagagcccccgaggacggggagggtcgggccgagacgttactggacatcttc
acgggggtccggctctacctgcccccgtccaccccggacttcggacggctccggcgctac
ttcgtggcctacgacggggacctggtccgggagtcggacgcggcgtcggccacgcacgcg
gtgggcgccggggacgggagccccgcggcccggcgcgtctctcccgagtggatctgggcc
tgcgtccgcaagcgcgggctggtggccccccgctga

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