Ornithorhynchus anatinus (platypus): 100086791
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Entry
100086791 CDS
T01045
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100086791 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oaa03400
]
100086791 (LIG3)
Enzymes [BR:
oaa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
100086791 (LIG3)
DNA repair and recombination proteins [BR:
oaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
100086791 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
RNA_ligase
BRCT_2
mRNA_cap_enzyme
DGF-1_C
Motif
Other DBs
NCBI-GeneID:
100086791
NCBI-ProteinID:
XP_028938172
Ensembl:
ENSOANG00000050784
LinkDB
All DBs
Position
17:complement(2560208..2573787)
Genome browser
AA seq
991 aa
AA seq
DB search
MRWAFPASLLVRRTVGAPGPPAPRPGAMAEQRYCVDYAKRGTAGCKKCKDKIAKGACRIG
KVVPNPFSESGGDMKEWYHVRCVFEKLERARAATKKIEDLTELEGWEELREPERGHIRQL
VADLASKTAGTPKKKATVQAKLTASGEVVSPRKGVAPVTDGNPRKFSGFTAKPGPGPDAP
SGSAAPGPAARRCDRTHRDCLLREFRKLCAMVADKPGYNAKTQIIQHFLQKGAGGDGFHG
DVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFQCSQEDMVRDLEQGDVSETVRIFFEQS
RSFPPAAKSLLTLQEVDEGLLRLSKLTKEDDQQNLLRDLASRCTANDLKCIVRLIKHDLK
MNSGAKHVLDALDPNAYEAFKASRDLRDVVERVLRNQREAEKGPGLRRTLSVQASLLTPV
QPMLAEACKSIEYAMKKCPNGMYSEIKYDGERVQVHKSGDHFSYFSRSLKPVLPHKVAHF
KDYIPRAFPGGHSMILDAEVLLIDTNTGKPLPFGTLGVHKKAAFQDAKVCLFVFDCIYFN
DVSLMDRPLQERRRFLQDNMVEIPDRILFSEMKHVTRASDLADMINRVIREGLEGLVLKD
VKSTYEPGKRHWLKVKKDYLNQGAMADTADLVVLGAFYGQGNKGGMMSIFLMGCYDPRAQ
RWCTVTKCAGGHDDATLARLQKELDVVKISKDPGKIPAWLKINKIYYPDFIVPDPKRAPV
WEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLQQLKELYQLSKEKADFTVT
APEEGGSGSGGEEEGDSGPSPPPRAAETAAGEPPAGKSPGRPGAARSGEGEDGAYPSSRP
GTARGRRGGACGRTRSVGSRLGGRPGAEAASCPSPPEPAPLHPPGAAVRSSAEKAPEPRG
VKRRAPEDGEGRAETLLDIFTGVRLYLPPSTPDFGRLRRYFVAYDGDLVRESDAASATHA
VGAGDGSPAARRVSPEWIWACVRKRGLVAPR
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgcggtgggcgttcccggcctcgctcctcgtccggcggaccgtcggagcccccggcccc
ccggccccccggcccggcgccatggcggagcagcgctactgcgtggactacgccaagcgg
ggcacggccggctgcaagaagtgcaaggacaagatcgccaagggcgcctgccgcatcggc
aaggtggtgcccaaccccttctccgagtcgggcggcgacatgaaggagtggtaccacgtc
aggtgcgtgttcgagaagctggagcgcgcccgggccgccaccaagaagatcgaggacctg
acggagctggagggctgggaggagctgcgcgagcccgagagggggcacatccgacagctg
gtcgcagatctcgcctccaagaccgcgggcacccccaagaagaaggccacggtccaggcc
aagctgaccgcctccggggaggtcgtgtccccgcggaagggagtcgcccccgtgaccgac
ggtaacccccgcaagttctccggtttcacggccaagcccggcccggggcccgacgccccc
tccggctcggccgcccccggcccggcggcccggcgctgcgaccggacccacagggactgc
ctgctgcgcgagttccgcaagctgtgcgccatggtggccgacaagcccggctacaacgcc
aagacgcagatcatccagcacttcctgcagaagggggcgggtggagacggattccacggc
gacgtgtacctgacggtgaagctcttactgccgggcgtcatcaagagcgtttacaacctg
aacgacaagcagatcgtgaagctgttcagccgcatcttccagtgcagccaggaggacatg
gtgcgggacctggagcagggagacgtctcggagacggtgcgcatcttcttcgagcagagt
cgctccttcccgccggcggccaagagcctgctgacgctgcaggaggtggacgaggggctg
ctgcggctgtccaagctgaccaaggaggacgaccagcagaacctgctgagggacctcgcc
tccaggtgcacggccaacgacctcaaatgcatcgtgcggctcatcaaacacgacctgaag
atgaactcgggggcgaagcacgtgctggacgccctggaccccaacgcctacgaggccttc
aaggcgtcccgcgacctccgcgacgtggtggaacgcgtcctgcgcaaccagcgggaggcc
gagaaggggccgggcctccggcggacgctcagcgtgcaggcctcgctcctgacccccgtg
cagcccatgctggccgaggcctgcaagtccatcgagtacgccatgaagaagtgccccaac
ggcatgtactcggagatcaagtacgacggcgagcgggtccaggtgcacaagagcggcgac
cacttcagctacttcagccgcagcctcaagcccgtcctcccccacaaggtggcccacttc
aaggactacatcccccgggccttccccgggggccacagcatgatcctcgatgccgaagtg
ctgctcatcgacaccaacacgggcaagcccctgcccttcggcaccctcggggtgcacaag
aaagccgccttccaggatgccaaagtctgcctgtttgtgttcgactgcatctacttcaat
gacgtcagcttgatggacaggcccctgcaggagcggcggcggttcctccaggacaacatg
gtggagatccccgaccgcatcctcttctcggaaatgaagcacgtcacgagagcgtcggac
ctggccgacatgatcaacagggtgatccgggaagggctggagggcctcgtgctcaaggac
gtcaagagcacgtacgagccgggaaagcggcactggctgaaagtgaagaaggactacctg
aaccagggcgccatggccgacacggccgacctggtggtcctcggcgccttctacgggcag
gggaataaaggcggcatgatgtccatcttcctcatgggctgctacgacccccgggcccag
cggtggtgcacggtcaccaagtgcgccgggggccacgacgacgccaccctcgcccgcctc
cagaaggagctggacgtggtcaagatcagcaaggaccccggtaagatccccgcctggctc
aagatcaacaagatctactaccccgacttcatcgtgcccgatcccaagagagcgcccgtg
tgggagatcaccggcgccgagttctccaggtccgaggcccacacggccgacggcatctcc
atccgcttcccccgctgcacccgcatccgcgacgacaaggactggaagtcggccaccaac
ctccagcagctcaaggagctgtaccagctgtccaaggagaaggccgacttcaccgtgacg
gccccggaggagggcggctcgggcagcggcggggaggaggagggcgattcgggaccctcc
ccgcccccccgggccgccgagacggcggccggcgagcccccggccgggaaatctccgggg
agaccgggcgccgcccggagcggagagggtgaggacggcgcctacccgtcgtcccgtccc
gggaccgcccggggccggagggggggtgcgtgtggccggacgcgttccgtgggatcgcgt
ctcggggggaggccgggagccgaggccgcctcgtgcccatcgccccccgagcccgcgccc
ctccaccccccgggcgccgccgtgagatcctccgcggagaaggcgccggaaccgcgaggg
gtgaagcgaagagcccccgaggacggggagggtcgggccgagacgttactggacatcttc
acgggggtccggctctacctgcccccgtccaccccggacttcggacggctccggcgctac
ttcgtggcctacgacggggacctggtccgggagtcggacgcggcgtcggccacgcacgcg
gtgggcgccggggacgggagccccgcggcccggcgcgtctctcccgagtggatctgggcc
tgcgtccgcaagcgcgggctggtggccccccgctga
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