Ornithorhynchus anatinus (platypus): 100088460
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Entry
100088460 CDS
T01045
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa03015
mRNA surveillance pathway
oaa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100088460 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100088460 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oaa03019
]
100088460 (CPSF7)
Messenger RNA biogenesis [BR:
oaa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100088460 (CPSF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
100088460
NCBI-ProteinID:
XP_028916650
Ensembl:
ENSOANG00000010882
LinkDB
All DBs
Position
3:17382263..17402631
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AA seq
501 aa
AA seq
DB search
MSEGVDLIDIYADEEFNQPRAEKMKEDAPECPRPSESKLEKGWGTSVQDSEFSNADQIDL
YDDVLAASAQPSDDRSASAEPPPPIRQEQSPKPNSKSPAILYTYSGLRNKRAAVYVGSFS
WWTTDQQLIQIIRSVGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLELLPGKIL
NGEKVDVRLATRQNLSQFEAQARKRPTCKIPPCFGPQLPGVPPRAHSRDSSDSADGRATP
TENLVPPPPRVLPYFNRPPSALPLMGLPPPPIPPPPPLSSGFGVPPPPPGIHYQHLMPPP
PRLPPHLAVPPPGAIPPALHLNPAFFPPPNAAVGPPPDAYIKASAPYNHHGSRELGPPPS
TVSEAEFEEIMNRNRAISSSAISKAVSGASAGDYSDAIETLLTAIAVIKQSRVANDERCR
VLISSLKDCLHGIEAKSYSMGAGGSSSRKRHRSRERSPSRSRESSRRHRDLLHNEDRHED
YFQERNREHERHRDRERDRHH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagggagtggatttgatcgatatttacgccgacgaggagttcaaccagcccagg
gctgagaagatgaaggaagatgccccagaatgccccagaccttctgaatcaaagttggaa
aagggatggggaacaagtgtgcaagactcggagttcagcaatgcagatcagatcgacctg
tatgacgatgtgctggcggccagcgcccagccttctgatgatcggagcgccagcgctgag
ccaccgcctcccattcgtcaggagcagtctcccaagcccaacagcaagtctcctgccatc
ctgtacacctacagcggactgcgcaataagcgggcagctgtctacgtgggcagcttctcc
tggtggaccaccgaccaacagctgatccagatcattcgctctgtgggagtctacgatgtg
gtggagctgaagttcgccgagaaccgagccaacgggcagtcgaaagggtacgctgaggtg
gtggtggcctctgagaattccgtccacaaactcctggagctcttgcctggcaagatcctc
aatggggagaaagtggacgtgaggctggccacccggcagaacctgtcacagtttgaggcg
caggctcggaaacgtcctacttgcaaaatcccgccctgctttgggcctcagctgccagga
gtgccgccgcgggcccattcccgagattccagcgactccgctgatggacgggccacaccc
actgagaaccttgtgcccccacctccccgcgtgctgccctacttcaaccgtcccccttcg
gctctccccctaatgggtctgcccccaccacccatcccacccccaccgcctctctcctcg
ggctttggggtcccgcctccccctcctggaatccactaccagcatctcatgccccctccc
cctcgactgcctccccacctggccgtgcctccccctggggccatcccccccgctcttcac
ctcaacccagccttcttccccccaccgaatgctgcagtgggtcccccaccagatgcttat
atcaaggcctctgcgccctataaccaccacggcagccgagagctgggccctccgccctct
actgtgagtgaagctgagtttgaggagatcatgaaccgaaacagagcgatttccagcagt
gccatttccaaagcggtgtctggagccagtgcaggggattacagcgacgccattgagact
ctgctcacagccatcgctgtcatcaaacagtcccgcgtcgccaatgacgagcgctgtcgg
gtcctcatctcctccctcaaggactgtcttcatggcattgaagccaagtcctacagcatg
ggcgccggcgggagctcttccaggaaaagacaccggtctcgggagcggtcacccagtcgg
tcccgggagagcagccggaggcaccgggacctgctccacaacgaggatcggcatgaggat
tatttccaagaaaggaaccgggagcacgagagacaccgggacagagaaagggaccggcac
cactga
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