Oscillatoria acuminata: Oscil6304_3304
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Entry
Oscil6304_3304 CDS
T02368
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
oac
Oscillatoria acuminata
Brite
KEGG Orthology (KO) [BR:
oac00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Oscil6304_3304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oac03021
]
Oscil6304_3304
Transcription machinery [BR:
oac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Oscil6304_3304
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AFY82879
UniProt:
K9TLJ7
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All DBs
Position
complement(4112527..4114386)
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AA seq
619 aa
AA seq
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MVYRHIHIEDLEHIKDALSVAVLFESLGYDADCDPLEVSDLQLSPSNTEAIKTAYLIANQ
EKGTLQVFLLELEPKSWSSNAGVIVRLTAIAKNLCQRDTDILIVATVNYQQLVLISPFQT
LDQQLNLKLSIAKMFINVKNPSFYDLNQLEKIAAHSLKPSQLYQVQHQTLKQVREEKRQP
ISTDLVQCYLREIGRIPLLKREDEISLAQQVQRWIQLEQGKQSLNSKLHREPTRSEWANA
TGLSLSQLEDAISKGRKAQKSLVYSNLRLVVSIAKIYQHRGLELLDLIQHGNEGLIKATE
KFDPIKGYKFSTYATHWIRQHITRGLCNESRIIRLPVHIQESLSKVKKTTRHLTLKLEHI
PSLEKIAVELEMSVEQVKFLRRINKLSQPSSLDALLTDDLTLADLLPSKDNLAQCLEQQW
MREEIDKALSTLKPREQEVLTLRFGLDGQGERTLEKIGDYYGLTRERIRQVQDKALRKFK
VAYNPRQHVKDRETQQTTSEINKVILPLPQLFKDATRLNPDTSSDSLNSPTLQFFCNPSV
SVLIQFQELNAHRRLYANDDSSLKQHLFTLITNKYYAKPTYIIKNIIHLVWGIEATQTDL
YSIAQNQLKQWGLLPTSLT
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtttatcggcatatacatatagaagacttagaacatatcaaggatgctttatcggta
gccgtcctatttgaatcattgggttatgatgctgattgcgatccccttgaggtgagtgac
ctacagttatcgcctagtaataccgaagcaataaaaacagcgtatctaattgcaaatcag
gaaaagggaacactacaagtatttttattggaactagaaccgaaaagttggagttctaat
gcaggagtaatcgtccgactaacggcgattgccaagaatttatgccagcgtgatacggat
attttaattgtcgctacagtaaattatcaacaattagtgttaatcagtcctttccaaaca
cttgaccaacaattaaatcttaagttgagcattgctaagatgttcatcaacgtcaaaaac
cccagcttttatgacttgaatcaattagagaaaatagctgctcatagcctcaaacctagc
caactttatcaggtgcaacaccaaaccttgaaacaggtgagggaagagaaacggcaaccc
atcagtacagatttagtgcaatgctacctcagagaaattggccggattccattacttaaa
cgcgaggatgagatatctttagctcaacaggtacagcgatggattcagttagaacaaggt
aagcagtctttaaattctaaactccaccgagaacctacgcgctcagagtgggcaaatgct
acgggtttgtcgttatctcagttagaggatgctatttctaagggacgaaaggcccaaaaa
tctctagtttatagtaacctcagattggtggtatccattgccaaaatttaccaacatcgt
ggcctagagttattagatttaattcagcatggaaacgagggattgattaaagctactgaa
aaatttgacccgataaagggttataaattctccacctatgcaacccattggattcggcag
catattactcgtggcttgtgtaatgagtccagaataattcgtctacctgtccacatccag
gagagtctgagcaaagtaaaaaaaacaacccgtcacctcacccttaaacttgagcatatc
cccagtttagaaaagattgcggttgagttagaaatgagtgtggaacaagttaaattttta
cgccgaatcaacaaattaagccagccaagctcattagatgctctactaaccgatgactta
actctagctgatttactccccagtaaagataacttggctcaatgcttagaacagcaatgg
atgcgtgaagaaattgataaagcattgtctactttaaaaccccgagagcaagaagtgcta
acccttcgatttggcttagatggtcagggagaacggaccctagaaaaaattggtgattac
tatggactgacacgagaaagaatccgtcaagttcaggataaggcactaaggaaatttaaa
gtggcatacaacccacgacaacacgttaaagatagagagacccaacaaactacttcagaa
ataaataaagttattctaccgctaccacaattgtttaaagatgccactcgattaaaccct
gacaccagtagtgattcactgaactcccccactttgcaatttttttgcaatccttccgta
tctgtactcattcagttccaagaattgaacgctcatcgtcggctctatgccaatgacgat
tcatccttaaaacaacacctatttaccttaatcacaaataaatactatgccaaacctaca
tacattatcaaaaacattatccacctcgtttggggaattgaggccactcaaactgacctc
tactctattgcccagaaccaactaaaacaatggggacttcttccaacctctttaacttaa
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