KEGG   Brucella anthropi OAB: DR92_3927
Entry
DR92_3927         CDS       T03251                                 
Symbol
ligD
Name
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
oah  Brucella anthropi OAB
Pathway
oah03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:oah00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    DR92_3927 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oah03400]
    DR92_3927 (ligD)
Enzymes [BR:oah01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DR92_3927 (ligD)
DNA repair and recombination proteins [BR:oah03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     DR92_3927 (ligD)
SSDB
Motif
Pfam: LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S mRNA_cap_enzyme
Other DBs
NCBI-ProteinID: AIK42414
UniProt: A0A8B3IMD5
LinkDB
Position
2:1447406..1449910
AA seq 834 aa
MGQSLETYRRKRDFTLTNEPRGKSSRTKRELFVVQKHDARRLHYDFRLEMDGVLKSWAVT
RGPSLVPGEKRLAVHVEDHPLEYADFEGTIPKGKYGGGTVIVWDTGRWKSTADAHQQYKK
GHLEFELTGEKLKGRWHLIRMHGKPDEKRENWLLIKGEDEFSRNPDEPDILVEMPKSVKT
GRAIADVEHEAPGWSSKTGSINKKSNAQGDGGGANIKNAKKRPMPSFVKPELATLVSVAP
DGNRWLHEIKFDGYRIQAHIAGGKVALYSRGGLDWTEKFGQQIARDLVGTSVNEAIFDGE
IVVESQSGLSDFSALQEDLREGRSDRFVYYLFDLLHVDGKDLRQTPLVERKTLLEKLISA
SSSTLRFSEAFDADGAAVLKNACGLGLEGIVSKLREASYRSGRSNDWRKSKCIGRQEFVI
AGYVPSTVTRAAIGSLLLGVQDKKGLVPVGRVGTGFSVRIAKELYKRLQAMRQGGSPFAV
PLTADERRGAKFVTPLLVAEIEFRAWTADKRLRHASFRGVRDDKAAKDVIWEKQTMSPRI
SSKGPEEIDVKLTHPDRVYWPGEGVTKQGLADYYSAIWSSIEPFIVNRPLALLRCPTGID
GEHFFQRHAWKGLNEHIIEVQDPENKEEEPYISIRDFNGLIGLVQAATLEIHPWGSTLKN
WELPDTLTMDLDPGEGVPWSRVIEAAIETKERLEKLGLKTFVKTSGGKGLHVVAPLKPKV
DWDALKSFTKAIADQMAADSPDRYVSTISKAKRKGKILIDYLRNQRGMTAVAPYSPRARP
GAAVSMPLGWDEVTSAIGPAHFTIVNTPNRLAALNSDPWQDFRSAETPLPKLKK
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgggacagtcactcgaaacctatcgcaggaaacgcgattttaccctgactaacgagccg
cgcggtaagtcttcgcgcacaaaacgcgagctctttgtcgtgcaaaaacatgatgctcgc
agactgcattatgattttcgccttgagatggatggcgtgctgaaaagttgggctgtgacg
cgaggtccaagccttgttcctggcgaaaagcgactggccgtgcatgtggaggaccatccg
cttgaatatgcggacttcgaaggcacgatccctaaaggcaagtacggtggtggtacagtt
atcgtctgggatacagggcgttggaaatccactgctgatgcacatcagcaatacaagaaa
gggcatcttgagttcgagctcacaggggaaaaactcaaaggtcgctggcatttgatccgg
atgcacggaaagccagacgagaagcgagagaattggctcctcatcaagggggaggacgaa
ttttccagaaatcctgatgaacctgacattcttgtagagatgccgaaatcggtaaaaacc
ggccgcgccatcgccgatgtcgaacacgaagcgccaggatggtcatcgaaaactggttcg
atcaacaaaaagtcgaacgctcaaggggatggtgggggcgcaaatatcaaaaatgcgaag
aagcgaccgatgccgagtttcgtcaaacctgagctcgctacgctcgtatcagttgctcca
gatggaaaccgctggcttcacgagatcaagttcgacggttatcgcatccaggctcatatt
gcggggggcaaggtcgccctttattcgcgtgggggactggattggactgaaaaatttggc
cagcagattgccagagatcttgttggtacgagcgtgaacgaagccatatttgatggggag
atcgttgtcgaaagccagtcgggactgtctgacttttcagctttgcaagaggatctaagg
gagggacgttctgatcgattcgtttattaccttttcgatctactgcatgttgatggcaaa
gaccttcgccagacgcctctggttgagcgcaaaacgctgctcgaaaaattaatttctgca
tcatcgtcaacacttcgcttcagcgaggcctttgatgccgatggggctgcggtactgaag
aatgcctgcggacttggccttgagggcattgtgtcgaagctcagggaggcatcttataga
agcggtcgcagcaacgattggcgtaagtcgaaatgcattggacgacaggaattcgtcatt
gcaggctatgttccgtcgacggtaacgcgagcggcaatcggttcgctccttttgggtgta
caggataagaaggggctggttcccgtaggccgggtgggaacaggcttttcggtcaggatt
gcaaaagaactttacaaacggctgcaagccatgcggcagggagggagcccattcgccgtg
ccgctgacggcagatgaaaggcgcggagccaagttcgttacaccgctgctggtagcggaa
atcgaatttcgtgcctggactgccgataagcgattgcgtcacgcgtccttcaggggggta
cgagacgataaggctgccaaggacgtcatatgggagaagcaaaccatgtcaccccgtatt
tccagtaaaggccccgaggagatcgacgtgaagctcacacatcccgaccgggtttactgg
ccgggcgaaggtgtcacaaaacagggtctcgcagattattattccgctatctggtccagc
atcgaacctttcatcgtcaaccgccccctggcattgttacgctgcccaaccggaattgac
ggagaacacttctttcaaaggcacgcgtggaaggggttgaatgaacatattatcgaagtt
caagatccagagaacaaggaagaggagccttatatcagcattcgggacttcaacgggctg
atcggtctggtgcaagccgcgacgctggaaattcacccctggggttctacgctcaaaaat
tgggagctaccggatacgttgacaatggatctcgatccgggtgagggcgttccatggtcg
cgcgtgatcgaagccgcaatcgagaccaaggaacgtctggaaaaactcggattgaagacg
tttgttaaaacgtccggtggcaagggactacatgtggtcgcgccattgaagccgaaggtc
gactgggacgccctcaagagctttacaaaggctattgccgaccagatggctgcagacagt
cctgatcgctatgtttcgacgatttccaaggccaagcgcaaaggcaaaattcttattgat
tatctgcgcaatcagcgcggcatgactgctgtagcaccctattcgccgcgggcacgtcct
ggtgctgcagtttccatgccgcttgggtgggacgaagtgacgtcagcaataggccccgcc
cattttactattgtcaacacgccgaaccggctggccgcattgaatagcgatccctggcag
gattttcgcagcgcggaaacgccgctgcctaagctgaagaaatag

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