KEGG   Ochrobactrum anthropi OAB: DR92_4210Help
Entry
DR92_4210         CDS       T03251                                 

Definition
(GenBank) DNA ligase, ATP-dependent, family
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
oah  Ochrobactrum anthropi OAB
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:oah00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    DR92_4210
   03410 Base excision repair
    DR92_4210
   03420 Nucleotide excision repair
    DR92_4210
   03430 Mismatch repair
    DR92_4210
Enzymes [BR:oah01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DR92_4210
    6.5.1.6  DNA ligase (ATP or NAD+)
     DR92_4210
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     DR92_4210
DNA replication proteins [BR:oah03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    DR92_4210
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     DR92_4210
DNA repair and recombination proteins [BR:oah03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DR92_4210
   NER (nucleotide excision repair)
    Other NER factors
     DR92_4210
   MMR (mismatch exicision repair)
    Other MMR factors
     DR92_4210
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
LinkDB All DBs
Position
2:complement(1719480..1721099)
Genome map
AA seq 539 aa AA seqDB search
MRAFAELLDRLVLTPQRNGKLRLLIDYFRATPDPDRGLALAAITRDLELQSVKPAMLRAL
IAERTDPALFAYSYDYVGDLAETISLIWPGPSETAPGANLPLGIVVHELQNASRREGPML
VAGWLDLLGISERYALLKLVTGGLRIGVSARLAKQALADFGGVNVVEIEELWHGQSPPYE
VLFAWLEGRGEKPAATAAAPFRPVMLATALNETEIPSLDASAYSAEWKWDGIRVQAVAEN
GVRRLYSRTGDDISGAFPDILEVMDFEGAIDGELLVGHHGETGIETATFSDLQQRLNRKT
VSAKQLHDYPAFVRAYDLLQEGNQQTGTDLRALPFSERRARLQKFLGKLDPRRFDLSPLL
PFADFQELAQFRANPPHPVIEGVMLKRHDSTYLPGRPKGPWFKWKRDPFTVDAVIVYAQR
GHGKRSSYYSDFTFAVWTGPEDEPVLVPVGKAYFGFTDEELKLLDKFVRENTTERFGPVR
SVRAEPNHGLVVEVAFEGLNRSTRHKSGVAMRFPRFSRLRWDKPPREADRLETLEKLLS
NT seq 1620 nt NT seq  +upstreamnt  +downstreamnt
atgcgcgctttcgctgaacttcttgaccggctggttctgacaccgcagcgcaacggcaag
cttcgtctgcttattgactatttccgtgctactcccgacccggatcgcggtctggcattg
gcggcaatcacgcgcgatctcgaactgcaaagcgtgaagcccgccatgctgcgtgcactg
atagccgaacgcacagatcccgcactctttgcctattcctatgattatgtgggagacctc
gccgaaacgatttcgctcatctggcccggccctagtgaaaccgcgcccggcgcaaatctg
ccacttggcatcgttgtccacgaattgcagaatgcttcgcgccgcgaaggcccgatgctt
gtggccggatggctcgatctgctcggcatttcggaacgttatgcactgttgaagctggtc
accggcggtttacgcatcggggtttcggcccgcctcgccaaacaggctcttgctgatttc
ggcggcgtcaacgttgtcgaaatcgaggaactctggcacggccagtcaccgccctatgag
gtgcttttcgcctggctggaaggccgtggcgaaaaacctgctgccaccgcagccgcaccg
tttcgccccgtcatgctggcgacagcgcttaatgaaactgaaatcccctcgctcgacgca
tccgcctacagtgccgagtggaagtgggacggcattcgggtgcaggccgttgcggaaaac
ggcgtgcgccgcctctattcacgcaccggtgacgatatttccggcgcattcccggatatt
ctggaggtgatggatttcgaaggggcaatcgatggcgaattgctcgtcgggcatcacggc
gaaaccggcatagaaacggctacgttttccgacctccagcaaagactgaaccgcaagacc
gtgagtgcaaaacagttacacgactatccggctttcgtgcgggcctatgatctgttgcag
gaagggaaccagcagaccggcaccgatttgcgcgccctgcccttttccgaacgccgtgcc
cgcctgcaaaaattcctcggcaagctcgacccccgccggttcgatctttcgccactactg
cctttcgctgactttcaggaactggcgcagtttcgcgccaatccaccccatcccgtcatc
gaaggcgtgatgctgaagcgtcacgacagcacctatctgcccgggcgccccaaggggcca
tggttcaaatggaagcgcgatcctttcaccgtcgatgccgtgatcgtctatgcccagcgt
gggcacggcaagcgctccagctattattcagatttcacctttgccgtctggacgggaccg
gaagacgagccagtgctggtgccggtcggcaaggcttatttcggctttacggacgaagaa
ttgaagctgctggacaagtttgtgcgcgagaacaccaccgagcgcttcggcccggtgcga
tctgtccgcgccgagcccaatcatgggttggtggtggaggtggctttcgagggtctcaac
cgctccacgcgccataaatccggcgttgccatgcgctttccgcgtttttcgcggcttcgc
tgggacaagccgccccgcgaagcggaccggcttgaaacgctggaaaagctactgagctga

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